MELO3C011893 (gene) Melon (DHL92) v4

Overview
NameMELO3C011893
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionABC transporter C family member 3
Locationchr10: 4036532 .. 4036862 (-)
RNA-Seq ExpressionMELO3C011893
SyntenyMELO3C011893
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTAAAGCTTATGTTCCTCAAGGTGTTTGGAAAAGAGATTGACAAACAAGGATGTGTTAGAAGCCTGTGCTTTGAATCAGGATATCAAGTTGTGGCCGGATGGAGATTGTTCTTTGTTGGGAGAGACGGAGATGAACTTAAGTGGAGGGCAAAAGCAGAGGATTCAATTGGCAAGGGCTGTCTATAGTGATGCAGATGTTTACTTCTTGGATGATCCTTTTAGTGTTGTGGATGCATATACTGAAACACATTTGTTCAACGTAAGCATCATCTTGCTATTGTTCTTCTTGTCTGTTTCCTTTTATGATCTTTTACTTCTTCACTGA

mRNA sequence

ATGGAACTAAAGCTTATGTTCCTCAAGGATATCAAGTTGTGGCCGGATGGAGATTGTTCTTTGTTGGGAGAGACGGAGATGAACTTAAGTGGAGGGCAAAAGCAGAGGATTCAATTGGCAAGGGCTGTCTATAGTGATGCAGATGTTTACTTCTTGGATGATCCTTTTAGTGTTGTGGATGCATATACTGAAACACATTTGTTCAACGTAAGCATCATCTTGCTATTGTTCTTCTTGTCTGTTTCCTTTTATGATCTTTTACTTCTTCACTGA

Coding sequence (CDS)

ATGGAACTAAAGCTTATGTTCCTCAAGGATATCAAGTTGTGGCCGGATGGAGATTGTTCTTTGTTGGGAGAGACGGAGATGAACTTAAGTGGAGGGCAAAAGCAGAGGATTCAATTGGCAAGGGCTGTCTATAGTGATGCAGATGTTTACTTCTTGGATGATCCTTTTAGTGTTGTGGATGCATATACTGAAACACATTTGTTCAACGTAAGCATCATCTTGCTATTGTTCTTCTTGTCTGTTTCCTTTTATGATCTTTTACTTCTTCACTGA

Protein sequence

MELKLMFLKDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLFNVSIILLLFFLSVSFYDLLLLH
Homology
BLAST of MELO3C011893 vs. NCBI nr
Match: KAA0034219.1 (putative ABC transporter C family member 15 [Cucumis melo var. makuwa] >TYK15701.1 putative ABC transporter C family member 15 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDCSLLGE  MNLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 556 QDIKLWLDGDCSLLGERGMNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 615

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 616 KRCLLQLL 623

BLAST of MELO3C011893 vs. NCBI nr
Match: XP_008446087.1 (PREDICTED: putative ABC transporter C family member 15 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDCSLLGE  MNLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 693 QDIKLWLDGDCSLLGERGMNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 752

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 753 KRCLLQLL 760

BLAST of MELO3C011893 vs. NCBI nr
Match: XP_004135511.2 (putative ABC transporter C family member 15 [Cucumis sativus] >KGN51699.1 hypothetical protein Csa_008391 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDCSLLGE  MNLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 693 QDIKLWLDGDCSLLGERGMNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 752

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 753 KRCLLQLL 760

BLAST of MELO3C011893 vs. NCBI nr
Match: XP_038892249.1 (putative ABC transporter C family member 15 [Benincasa hispida])

HSP 1 Score: 110.5 bits (275), Expect = 7.4e-21
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KDIKLW DGDC+L+GE  MNLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 693 KDIKLWLDGDCTLIGERGMNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 752

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 753 KRCLLQLL 760

BLAST of MELO3C011893 vs. NCBI nr
Match: XP_023512574.1 (putative ABC transporter C family member 15 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.0 bits (271), Expect = 2.2e-20
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDC+LLGE  +NLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 693 QDIKLWQDGDCTLLGERGVNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 752

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 753 KRCLLQLL 760

BLAST of MELO3C011893 vs. ExPASy Swiss-Prot
Match: Q9LYS2 (ABC transporter C family member 10 OS=Arabidopsis thaliana OX=3702 GN=ABCC10 PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-17
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KD++L PDGD + +GE  +NLSGGQKQRIQLARA+Y DAD+Y LDDPFS VDA+T + LF
Sbjct: 707 KDLELLPDGDQTEIGERGVNLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTASSLF 766

BLAST of MELO3C011893 vs. ExPASy Swiss-Prot
Match: Q9LK62 (ABC transporter C family member 7 OS=Arabidopsis thaliana OX=3702 GN=ABCC7 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.7e-16
Identity = 39/68 (57.35%), Postives = 54/68 (79.41%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KD++++P  D +++GE  +NLSGGQKQRIQ+ARA+Y DAD+Y  DDPFS VDA+T +HLF
Sbjct: 729 KDLEVFPFRDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLF 788

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 789 KEVLLGLL 796

BLAST of MELO3C011893 vs. ExPASy Swiss-Prot
Match: Q54JR2 (ABC transporter C family member 3 OS=Dictyostelium discoideum OX=44689 GN=abcC3 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-16
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DI+L+P GD   +GE  +NLSGGQKQR+ +ARAVYSD+DVY LDDP S VDA+   HLF
Sbjct: 544 RDIELFPQGDLVEIGERGVNLSGGQKQRVSIARAVYSDSDVYILDDPLSAVDAHVGKHLF 603

Query: 69  N 70
           +
Sbjct: 604 H 604

BLAST of MELO3C011893 vs. ExPASy Swiss-Prot
Match: Q8ST87 (ABC transporter C family member 10 OS=Dictyostelium discoideum OX=44689 GN=abcC10 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-16
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DI+L+P GD   +GE  +NLSGGQKQR+ +ARAVYSDADVY LDDP S VD++   HLF
Sbjct: 529 RDIELFPQGDSVEIGERGINLSGGQKQRVSIARAVYSDADVYILDDPLSAVDSHVGKHLF 588

Query: 69  N 70
           +
Sbjct: 589 H 589

BLAST of MELO3C011893 vs. ExPASy Swiss-Prot
Match: Q54U44 (ABC transporter C family member 12 OS=Dictyostelium discoideum OX=44689 GN=abcC12 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-16
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DI+L+P GD   +GE  +NLSGGQKQR+ +ARAVYSDADVY LDDP S VD++   HLF
Sbjct: 534 RDIELFPQGDSVEIGERGINLSGGQKQRVSIARAVYSDADVYILDDPLSAVDSHVGKHLF 593

Query: 69  N 70
           +
Sbjct: 594 H 594

BLAST of MELO3C011893 vs. ExPASy TrEMBL
Match: A0A5D3CUX0 (Putative ABC transporter C family member 15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002000 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDCSLLGE  MNLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 556 QDIKLWLDGDCSLLGERGMNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 615

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 616 KRCLLQLL 623

BLAST of MELO3C011893 vs. ExPASy TrEMBL
Match: A0A0A0KS22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590160 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDCSLLGE  MNLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 693 QDIKLWLDGDCSLLGERGMNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 752

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 753 KRCLLQLL 760

BLAST of MELO3C011893 vs. ExPASy TrEMBL
Match: A0A1S3BF27 (putative ABC transporter C family member 15 OS=Cucumis melo OX=3656 GN=LOC103488915 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDCSLLGE  MNLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 693 QDIKLWLDGDCSLLGERGMNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 752

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 753 KRCLLQLL 760

BLAST of MELO3C011893 vs. ExPASy TrEMBL
Match: A0A6J1FZE2 (putative ABC transporter C family member 15 OS=Cucurbita moschata OX=3662 GN=LOC111449319 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-20
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDC+LLGE  +NLSGGQKQRIQLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 687 QDIKLWLDGDCTLLGERGLNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLF 746

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 747 KRCLLQLL 754

BLAST of MELO3C011893 vs. ExPASy TrEMBL
Match: A0A6J1HUS2 (putative ABC transporter C family member 15 OS=Cucurbita maxima OX=3661 GN=LOC111466379 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           +DIKLW DGDC+LLGE  +NLSGGQKQR+QLARAVYSDADVYFLDDPFS VDA T THLF
Sbjct: 688 QDIKLWLDGDCTLLGERGLNLSGGQKQRVQLARAVYSDADVYFLDDPFSAVDACTGTHLF 747

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 748 KRCLLQLL 755

BLAST of MELO3C011893 vs. TAIR 10
Match: AT3G59140.1 (multidrug resistance-associated protein 14 )

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-18
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KD++L PDGD + +GE  +NLSGGQKQRIQLARA+Y DAD+Y LDDPFS VDA+T + LF
Sbjct: 707 KDLELLPDGDQTEIGERGVNLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTASSLF 766

BLAST of MELO3C011893 vs. TAIR 10
Match: AT3G13100.1 (multidrug resistance-associated protein 7 )

HSP 1 Score: 84.7 bits (208), Expect = 4.1e-17
Identity = 39/68 (57.35%), Postives = 54/68 (79.41%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KD++++P  D +++GE  +NLSGGQKQRIQ+ARA+Y DAD+Y  DDPFS VDA+T +HLF
Sbjct: 729 KDLEVFPFRDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLF 788

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 789 KEVLLGLL 796

BLAST of MELO3C011893 vs. TAIR 10
Match: AT3G13090.1 (multidrug resistance-associated protein 8 )

HSP 1 Score: 84.0 bits (206), Expect = 6.9e-17
Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KD+++ P  D +++GE  +NLSGGQKQRIQ+ARA+Y DAD+Y  DDPFS VDA+T +HLF
Sbjct: 706 KDLEILPFHDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLF 765

Query: 69  NVSIILLL 77
              ++ LL
Sbjct: 766 KEVLLGLL 773

BLAST of MELO3C011893 vs. TAIR 10
Match: AT1G04120.1 (multidrug resistance-associated protein 5 )

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KDI+L+  GD +++GE  +NLSGGQKQR+QLARA+Y DAD+Y LDDPFS +DA+T + LF
Sbjct: 727 KDIELFSHGDQTIIGERGINLSGGQKQRVQLARALYQDADIYLLDDPFSALDAHTGSDLF 786

Query: 69  NVSIILLLFFLSVSF 84
              I+  L   +V F
Sbjct: 787 RDYILSALAEKTVVF 801

BLAST of MELO3C011893 vs. TAIR 10
Match: AT1G04120.2 (multidrug resistance-associated protein 5 )

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 0

Query: 9   KDIKLWPDGDCSLLGETEMNLSGGQKQRIQLARAVYSDADVYFLDDPFSVVDAYTETHLF 68
           KDI+L+  GD +++GE  +NLSGGQKQR+QLARA+Y DAD+Y LDDPFS +DA+T + LF
Sbjct: 727 KDIELFSHGDQTIIGERGINLSGGQKQRVQLARALYQDADIYLLDDPFSALDAHTGSDLF 786

Query: 69  NVSIILLLFFLSVSF 84
              I+  L   +V F
Sbjct: 787 RDYILSALAEKTVVF 801

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0034219.15.7e-2180.88putative ABC transporter C family member 15 [Cucumis melo var. makuwa] >TYK15701... [more]
XP_008446087.15.7e-2180.88PREDICTED: putative ABC transporter C family member 15 [Cucumis melo][more]
XP_004135511.25.7e-2180.88putative ABC transporter C family member 15 [Cucumis sativus] >KGN51699.1 hypoth... [more]
XP_038892249.17.4e-2179.41putative ABC transporter C family member 15 [Benincasa hispida][more]
XP_023512574.12.2e-2077.94putative ABC transporter C family member 15 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9LYS24.0e-1768.33ABC transporter C family member 10 OS=Arabidopsis thaliana OX=3702 GN=ABCC10 PE=... [more]
Q9LK625.7e-1657.35ABC transporter C family member 7 OS=Arabidopsis thaliana OX=3702 GN=ABCC7 PE=1 ... [more]
Q54JR27.5e-1662.30ABC transporter C family member 3 OS=Dictyostelium discoideum OX=44689 GN=abcC3 ... [more]
Q8ST877.5e-1662.30ABC transporter C family member 10 OS=Dictyostelium discoideum OX=44689 GN=abcC1... [more]
Q54U447.5e-1662.30ABC transporter C family member 12 OS=Dictyostelium discoideum OX=44689 GN=abcC1... [more]
Match NameE-valueIdentityDescription
A0A5D3CUX02.8e-2180.88Putative ABC transporter C family member 15 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KS222.8e-2180.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590160 PE=4 SV=1[more]
A0A1S3BF272.8e-2180.88putative ABC transporter C family member 15 OS=Cucumis melo OX=3656 GN=LOC103488... [more]
A0A6J1FZE21.4e-2077.94putative ABC transporter C family member 15 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1HUS21.8e-2076.47putative ABC transporter C family member 15 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
Match NameE-valueIdentityDescription
AT3G59140.12.8e-1868.33multidrug resistance-associated protein 14 [more]
AT3G13100.14.1e-1757.35multidrug resistance-associated protein 7 [more]
AT3G13090.16.9e-1757.35multidrug resistance-associated protein 8 [more]
AT1G04120.11.2e-1656.00multidrug resistance-associated protein 5 [more]
AT1G04120.21.2e-1656.00multidrug resistance-associated protein 5 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 23..56
e-value: 1.3E-7
score: 32.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..77
e-value: 3.4E-17
score: 64.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..70
NoneNo IPR availablePANTHERPTHR24223ATP-BINDING CASSETTE SUB-FAMILY Ccoord: 7..73
NoneNo IPR availablePANTHERPTHR24223:SF263ABC TRANSPORTER C FAMILY MEMBER 10-LIKEcoord: 7..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011893.1MELO3C011893.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding