MELO3C011875 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011875
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	nuclear pore complex protein NUP54
Location	chr10: 4153389 .. 4158117 (-)
RNA-Seq Expression	MELO3C011875
Synteny	MELO3C011875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTCTTCCTTAAACCCCAACATTGAAAATTCGAGGGAAGCTTCATCTCGTCAAGAACGAGTTCGAGTCTCGAATGGCAATTTCGGTTTGAGACGTTAGGGTTTCTCTTCGATCCTCCATTGCAAATACAATGTTCGGAGCTCAAACGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCATTTGGCACTCCTCAATCAACTCCGGCATTTGGCACACCGGCGTCCACTCCTGCCTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCGACTCCTGCCTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCTCTCTTTTCTCTACTCCATTCTCTTCTCAGCCTTCACAACAGCAGCAGCAGTTGCAGCAATCGACGCTGTTTCCGCAATCATCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCAGCGCCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAGATGGCCCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGTATGTTTCTGAAAGATATCGGCAAGAAGTAGTCATATATCTTTTCGCTTTATATATCCGCGCCTATTGATTTTGTTTTCGTTGTGTGCATTAGGCAATTGTTGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTATGCTTTCAAGGTTCGTTTCCTTTATCTTGACTGGAAATTGGAATGCCTCGTGTTTTTACACTCACTAACACCTCAGAGTTGTTGATGATCGTGAGGGGAAGATACTATAAGCTTTCGTGTGCAGTTGCTCCGAAGTTGATGATTGTATTTATTTTGCAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGGCGAAGCCTCCTGGTGTATCGGATGTGAGTTCAATATGACATGTTTTTACGACTGAAGAATTCTCATCTCTTTGTATGCGTTTTTTCTTTTTGTCGGATTCTACACTAAGTCCGGATAATAGTTTGCATTGCCAGATAATGTGGGCTGAGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGGTATTTCAATTTACTGCAAAATGTGTCGTGCAATTTATTGATTATGTTTTAAGATATTTGTCTCGGCGCTTGAAGGTTGTGTGTCGTCCATATATTTTGCATATTTGATTATGTTTTGTGACTTTTTTGCTTATCTTTTGTTATAGCTTCTAAATTTGTCACTATCTCCATCACTGGAGGATTTTCTGGCGTTTTCTTTAGAAACCTTAACTATTTGTTAATTAACTTTTAGCTGCTATGTAACACCATGGATCTTATTTTGATACTTTGAGCCTTTTGATATATTGATATGAGTGGTGACTTGTGATCCAAAGTTACATCTAAGAAATGGCACTGATGAATATAGAATCATAAATAATGTTTGGTCTGCCAGTTTCACAATTTTAAGAGTTTTTTTTTTTTTTTTTGTGTGTTTGAAATAAATGTTTAAGTTTTACGATTATAACTTCACTTAATTTTTCTTTTGATGATTTACCACATCAATAATAACGATTGAACGAGAAAGATGCAATAATGTCAGGGCTTACTGAATGTTAAAACTAGTCTTAAACTTGATTGTTTATTTGAATATTTTTTTTTTATTATTCTTTTTTAAAATTAACGACATTATAGTTCCAATTATGATGGTGAAAAGTCAAATTTATGAAAACTATATATGTCAAGAGTATTCATCATTAGTAAAATAAAATTCAAACAGTAACCAAGATTTTTGTAACGTTTCATGTTTGTATTTTTTATTTTTTTCCCTTATGTATATTGGTAAACTTCAAACGCCTCGAGGATAATGCCTCCTCTGTGTCTTTACTGTATCCACCCCTTCGGGATGTTGTTTATTGTCTGTGTTAAATGTGTTAGGTACGAAGCTAATATGGGATGTCTTTGTCCCACGTTGGACGACCAATGTTAACTGACTTGGGTCTCCCACACCAATAGCTAGGAACAAAGGCATCCATCCCATACTTCTACTACGTTGGTACCTAACAAAATGCAGAACCTGAAGCAATGTATTGGGGAGTAGTCTTTTTTTCCCCTTGCAAATAATATAATGTGGGGTATGCCAGCCTCTACATATGTTATTGCCATTCAAAACTGTGAAGTAGGAAACACACATTATATTTGATAGGATGTCAATCATGTTTTGTTTCATCTATCAGTTTTGGTGAAACAAATGCAACAGCCTAGTGACTAATTTTATGTTGTCATTTAAGTTTTTTAATATGTTCATGGATAAATTCGATTATCTTGACTAATTGAGAATGTCCATGATTTATCAATATCAAATCTGCCGAAGGTCATAATTCGCTGAACCTTAGTAACTTCTACATGTTCTTCCACCATTCCTTGTAAAATGTAAGTATTCTTGAAGGTTGTCGTGTAATGAATGGATTTTGTTTCAGTTATTGTTTATGAAAATAGTTTTAACTTCTAGAAGTATCTTCAATTTCGTTGACATTAGCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCGTACTTTTCATCCTATTTTTAAGTGTTTTTTTGTTGCTGTGTTTGCTGTGCAAAGTAATCCGGTTTGTTGCACTGACTCTCCTGTGGGATTAATGCAGATTCAAGATGAAGTCATTCTCTCTGATTCTGAGAGACTACGCATGACCCAAAGCAATGTCAAAATGGTAATCTTATGCTTCGCTAATGATATATTTTATAAATTTCCTATTTCTACTTAATGCTTGATGCATGATGCAGCTTCAGAGGCATTTTTTAGCCGATACTCTACCTTGGGTACAAAGATTGAAACAGAAGGAGCAAGGTCTGCAAAGGCGTCTTTTGAGAGTATGTTTATTTTCTTAATCAGTGGGCTAATATGAAAACAATTGCTATGGATGTGATCATCAAGTTCTTCTATCCCGCCTCCTCACCCTCTAAAGATAAAGTTCATAATGCTACCACTGCCAAACTATGATTTTTAATTTGATATTTTCTTCAATAAAAGGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAGTGAAAGGAGAGGCTGAATTGGCAGAGAAGTTAGCTTTGATAACGAGGCAGGTACGTATCATTCACCACCTTTATGTTAAATGGAAGAGGTGATATTGATATTGAAAAACCTTCCGGTGGAGGGAATTCTAGGTCTTTATCATTTAGTTCAACTAAATTTCACTTTATCCCAATTGTTGAACATATACACCATTTCGAAATATAAGTAACTTGATACAAAAGTTCGAATTATTGGAAGAAGAGAAACTCTAATGATAGTTATGAAGGCTTATTTTTCTTTTCGAAGCACATCGCTAGATTATTATTATCATTAGTTTTCTTTTAATATCTATTATAATATGATACTATTGTCATTTTACCTGTAACGGAATTTGAAAGATTTCACTGAAACGTTTAAAGGTCCTGTGCACATTATGATCAATGGGGGATCATAAACTATAACTTATAACTAGGGAGAAATATGTTACTTGTCTCCAAAAGTTGCATCGTAATCATATTCTCAGACACTTTTCAGTTGAAGGGCTCTGGGGCAGAACTTTCAAAGAGGGTGCAAAATTTGCTTACAATTACTCGCGGTCAAGCCAATGGCTCTGGTCCTGGTAATTCCATCTATCTTCAAGGATCCGCAAAAATACATGAACAGAGTCTTGCCGATATGCAGGAGGTGCGAACATATTTTGTTTGGAGCATGCTTTTTCACTTCTAGTTTTGCTGGAAATAAACGTTATGAGGTTTACTAAAATTCTGTCAACAGTCATTCAAAAAGCACGGTGTAATGATCATATAAGTGGGAAATTTTGATCAATGCAGTTATGCTATTGTCAAATTTATTAACCAACTTCGTCTACGCTACGGCTCCATGTCGTGTGCCAGGTTTTACAGCAGCAGACGGAGGCCATTGCTAGACTTGGAAATGTTTTGAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCAAGTTAAAAGAAATTGAGTTCCCATTTCTAGCCATTCTTCTCTGGAGTGTCGTTATCAAAGTGTACTCGGCTTGATTATTCCGAATGGAAAAATTAAAATTCGTTTTCAATAGACTTTTAATGTACTGCTCAAGGTGCTATTCCACATCTTATTGAGAGAAGTGGGTTAGTGCACTCGGTTAAGATAGGTTAAACTTTTAACTGCTTAATACCTATGCAATTTTGATCTGATGCAGTGTTTAAAGGCTGAGAACTGTAGTGGCCCTTAAAGTACTCAGCATCACCTTGCAAGGCCTTGGATTCATCTTTCCCTTGTCAGGTGCGTGAGGTGGCCTCTCCCACTTTAAAATCTTACCATTTGGGGATGTTACGTCTCTTATTCTAAAAGCTTTTAAAGGGGAAAATGGGTTGCGTATAGTATGTAGTTGTTAGGTGTTCTCAACATTGAGAGTAACTACAAAAGGTGGGAGAGATGAGCTGTTTCCACACACATTATATGAGACTGTTTGGAATGCTTAGTTTATAATTTTAGTGAAGTTTAAGTGAGTATTAACAGTTAAGAATTTCAATTATTATAAGTTAATAG

mRNA sequence

TTCCTTCTTCCTTAAACCCCAACATTGAAAATTCGAGGGAAGCTTCATCTCGTCAAGAACGAGTTCGAGTCTCGAATGGCAATTTCGGTTTGAGACGTTAGGGTTTCTCTTCGATCCTCCATTGCAAATACAATGTTCGGAGCTCAAACGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCATTTGGCACTCCTCAATCAACTCCGGCATTTGGCACACCGGCGTCCACTCCTGCCTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCGACTCCTGCCTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCTCTCTTTTCTCTACTCCATTCTCTTCTCAGCCTTCACAACAGCAGCAGCAGTTGCAGCAATCGACGCTGTTTCCGCAATCATCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCAGCGCCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAGATGGCCCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGGCGAAGCCTCCTGGTGTATCGGATATAATGTGGGCTGAGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTCTCTGATTCTGAGAGACTACGCATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTTTAGCCGATACTCTACCTTGGGTACAAAGATTGAAACAGAAGGAGCAAGGTCTGCAAAGGCGTCTTTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAGTGAAAGGAGAGGCTGAATTGGCAGAGAAGTTAGCTTTGATAACGAGGCAGTTGAAGGGCTCTGGGGCAGAACTTTCAAAGAGGGTGCAAAATTTGCTTACAATTACTCGCGGTCAAGCCAATGGCTCTGGTCCTGGTAATTCCATCTATCTTCAAGGATCCGCAAAAATACATGAACAGAGTCTTGCCGATATGCAGGAGGTTTTACAGCAGCAGACGGAGGCCATTGCTAGACTTGGAAATGTTTTGAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCAAGTTAAAAGAAATTGAGTTCCCATTTCTAGCCATTCTTCTCTGGAGTGTCGTTATCAAAGTGTACTCGGCTTGATTATTCCGAATGGAAAAATTAAAATTCGTTTTCAATAGACTTTTAATGTACTGCTCAAGGTGCTATTCCACATCTTATTGAGAGAAGTGGGTTAGTGCACTCGGTTAAGATAGGTTAAACTTTTAACTGCTTAATACCTATGCAATTTTGATCTGATGCAGTGTTTAAAGGCTGAGAACTGTAGTGGCCCTTAAAGTACTCAGCATCACCTTGCAAGGCCTTGGATTCATCTTTCCCTTGTCAGGTGCGTGAGGTGGCCTCTCCCACTTTAAAATCTTACCATTTGGGGATGTTACGTCTCTTATTCTAAAAGCTTTTAAAGGGGAAAATGGGTTGCGTATAGTATGTAGTTGTTAGGTGTTCTCAACATTGAGAGTAACTACAAAAGGTGGGAGAGATGAGCTGTTTCCACACACATTATATGAGACTGTTTGGAATGCTTAGTTTATAATTTTAGTGAAGTTTAAGTGAGTATTAACAGTTAAGAATTTCAATTATTATAAGTTAATAG

Coding sequence (CDS)

ATGTTCGGAGCTCAAACGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCATTTGGCACTCCTCAATCAACTCCGGCATTTGGCACACCGGCGTCCACTCCTGCCTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCGACTCCTGCCTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCTCTCTTTTCTCTACTCCATTCTCTTCTCAGCCTTCACAACAGCAGCAGCAGTTGCAGCAATCGACGCTGTTTCCGCAATCATCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCAGCGCCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAGATGGCCCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGGCGAAGCCTCCTGGTGTATCGGATATAATGTGGGCTGAGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTCTCTGATTCTGAGAGACTACGCATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTTTAGCCGATACTCTACCTTGGGTACAAAGATTGAAACAGAAGGAGCAAGGTCTGCAAAGGCGTCTTTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAGTGAAAGGAGAGGCTGAATTGGCAGAGAAGTTAGCTTTGATAACGAGGCAGTTGAAGGGCTCTGGGGCAGAACTTTCAAAGAGGGTGCAAAATTTGCTTACAATTACTCGCGGTCAAGCCAATGGCTCTGGTCCTGGTAATTCCATCTATCTTCAAGGATCCGCAAAAATACATGAACAGAGTCTTGCCGATATGCAGGAGGTTTTACAGCAGCAGACGGAGGCCATTGCTAGACTTGGAAATGTTTTGAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCAAGTTAA

Protein sequence

MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

Homology

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BLAST of MELO3C011875 vs. NCBI nr
Match: XP_008446043.1 (PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo] >KAA0034202.1 nuclear pore complex protein NUP54 [Cucumis melo var. makuwa] >TYK15718.1 nuclear pore complex protein NUP54 [Cucumis melo var. makuwa])

HSP 1 Score: 729.9 bits (1883), Expect = 1.1e-206
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120
           TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180
           LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240
           MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300
           RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           ARLGNVLKRDVRDMEIIMAEDKEMADDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MELO3C011875 vs. NCBI nr
Match: XP_004135312.1 (nuclear pore complex protein NUP54 [Cucumis sativus] >KGN51680.1 hypothetical protein Csa_009114 [Cucumis sativus])

HSP 1 Score: 713.8 bits (1841), Expect = 8.3e-202
Identity = 378/389 (97.17%), Postives = 383/389 (98.46%), Query Frame = 0


Query: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQ SSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120
           TSSFATGFGSSLFSTPFSSQPSQQQQQLQQS +FPQSSATGFGFQTPF APQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180
           LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDI 180

Query: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240
           MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300
           RHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELS+RVQNLLT+TRGQANGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           ARLGNVLKRDVRDMEIIMAEDKEMADDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MELO3C011875 vs. NCBI nr
Match: XP_038893426.1 (nuclear pore complex protein NUP54 [Benincasa hispida])

HSP 1 Score: 703.7 bits (1815), Expect = 8.6e-199
Identity = 375/389 (96.40%), Postives = 380/389 (97.69%), Query Frame = 0


Query: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQ SSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120
           TSSFATGFGSSLFSTPFSSQPSQ QQQLQQS LFPQ +ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQPQQQLQQSPLFPQPAATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180
           LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRVKPAGVSDI 180

Query: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240
           MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDS+RLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSDRLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300
           RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELS+RVQNLLTITRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTITRGQANGSSAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           ARLGNVLKRDVRDMEIIMAED+EM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDREMTDDAS 389

[Close]

BLAST of MELO3C011875 vs. NCBI nr
Match: XP_023515339.1 (nuclear pore complex protein NUP54-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 662.9 bits (1709), Expect = 1.7e-186
Identity = 357/388 (92.01%), Postives = 364/388 (93.81%), Query Frame = 0


Query: 2   FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPST 61
           FG   S+ AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNL STPAFGTPST
Sbjct: 29  FGTLRSTPAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNL-STPAFGTPST 88

Query: 62  SSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQL 121
           SSFATGFGSSLFSTPFSSQP QQQQQ QQS LF Q  ATGFGFQTPFAAPQS+PFPNAQL
Sbjct: 89  SSFATGFGSSLFSTPFSSQPLQQQQQQQQSPLFQQRGATGFGFQTPFAAPQSSPFPNAQL 148

Query: 122 TTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIM 181
            TQMAPVAPLPF LADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP GVSD M
Sbjct: 149 ITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTM 208

Query: 182 WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQR 241
           WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIL+D+ERLRMTQSNVKMLQR
Sbjct: 209 WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQR 268

Query: 242 HFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ 301
           HFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKL+LITRQ
Sbjct: 269 HFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQ 328

Query: 302 LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIA 361
            K SGAELS+RVQNLL ITRGQ NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIA
Sbjct: 329 FKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIA 388

Query: 362 RLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           RLG VLKRDVRDMEIIMAED EM DD S
Sbjct: 389 RLGTVLKRDVRDMEIIMAEDNEMTDDPS 415

[Close]

BLAST of MELO3C011875 vs. NCBI nr
Match: KAG6573649.1 (Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 662.9 bits (1709), Expect = 1.7e-186
Identity = 352/388 (90.72%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 2   FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPST 61
           FG   S+ AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGN SSTPAFGTPS+
Sbjct: 19  FGTPQSTPAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNFSSTPAFGTPSS 78

Query: 62  SSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQL 121
           SSFATGFGSSLFSTPFSSQPSQ QQQ QQS LF   +ATGFGFQTPFAAPQS+PFPNAQL
Sbjct: 79  SSFATGFGSSLFSTPFSSQPSQPQQQQQQSPLFQLPAATGFGFQTPFAAPQSSPFPNAQL 138

Query: 122 TTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIM 181
           TTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKP GVSDIM
Sbjct: 139 TTQMAPVAPLPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTDPQYRAKPAGVSDIM 198

Query: 182 WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQR 241
           WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQR
Sbjct: 199 WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKTLQR 258

Query: 242 HFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ 301
           HFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP++ GEAELAE+LALITRQ
Sbjct: 259 HFLADTLPWIQRLKQKEQGLQRRLLRMMRVVEALESKGCRVPIMTGEAELAERLALITRQ 318

Query: 302 LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIA 361
           L+GSGAELS+RV+NLLTIT GQANGSG GNSIYLQGS KIHEQSLADMQEVLQQQTEAIA
Sbjct: 319 LRGSGAELSRRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLADMQEVLQQQTEAIA 378

Query: 362 RLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           RLG VLKRDVRDMEIIMAEDKEM DD S
Sbjct: 379 RLGTVLKRDVRDMEIIMAEDKEMIDDLS 406

[Close]

BLAST of MELO3C011875 vs. ExPASy Swiss-Prot
Match: Q8GYF7 (Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana OX=3702 GN=NUP54 PE=1 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.5e-140
Identity = 270/378 (71.43%), Postives = 317/378 (83.86%), Query Frame = 0


Query: 20  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFS 79
           FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFS
Sbjct: 2   FGTPSSSPSFGTPSSTPAFGT--SSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFS 61

Query: 80  SQPSQQQQQLQQ----STLFPQSSATGFGFQTPF----AAPQSTPFPNAQLTTQMAPVAP 139
           SQ  QQQQQ QQ    S+LF Q  ++ FGFQ+PF       Q TPFPNAQLTTQMAPVAP
Sbjct: 62  SQQPQQQQQQQQQQQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAP 121

Query: 140 LPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLE 199
           +P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLE
Sbjct: 122 IPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSKLE 181

Query: 200 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPW 259
           GM+S +RERLWPQLVQGFKDLSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P 
Sbjct: 182 GMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSNVKMLQRHLQASTFPS 241

Query: 260 VQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELS 319
           ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Sbjct: 242 IERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKLTAITRQVKGPGAELS 301

Query: 320 KRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRD 379
           +RVQ+L TI+R QAN    G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD
Sbjct: 302 RRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQETEAIGRLGNVLKRD 361

Query: 380 VRDMEIIMAEDKEMADDA 389
           +RDMEI++AED EMA D+
Sbjct: 362 MRDMEIMVAEDTEMALDS 377

[Close]

BLAST of MELO3C011875 vs. ExPASy Swiss-Prot
Match: Q9VDV3 (Nuclear pore complex protein Nup58 OS=Drosophila melanogaster OX=7227 GN=Nup58 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 57/137 (41.61%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 2   FGA-QTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 61
           FGA  T++ AFGT  +TPAFG P +T AFG PA+TPAFG  +A+PAFG  ++TPAFG P+
Sbjct: 82  FGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFGAPA 141

Query: 62  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTP-FAAPQSTPFPNA 121
            +S    FG+   +T F +  S Q            + A  F F TP  +AP + P    
Sbjct: 142 ATS---AFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFG 201

Query: 122 QLTTQMAPVAPLPFSLA 137
             TT     A +P SL+
Sbjct: 202 FGTTATTAAAAMPASLS 215

[Close]

BLAST of MELO3C011875 vs. ExPASy Swiss-Prot
Match: Q8BTS4 (Nuclear pore complex protein Nup54 OS=Mus musculus OX=10090 GN=Nup54 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 53/204 (25.98%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 174 PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQ 233
           P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 304 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 363

Query: 234 SNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAE 293
            ++  LQ++    T+  + + K+K   L  R L+V+   E     G  +     E +L  
Sbjct: 364 EDISELQKN-QTTTMAKIAQYKRKLMELSHRTLQVLIKQEIQRKSGYAIQA--DEEQLRV 423

Query: 294 KLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVL 353
           +L  I  +L  +  +   R+  L++  R Q N  G   ++  +    I    L ++++ L
Sbjct: 424 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ-NHFG---AVKSEEKYYIDADLLREIKQHL 483

Query: 354 QQQTEAIARLGNVLKRDVRDMEII 378
           +QQ E ++ L +++K D+ D++++
Sbjct: 484 KQQQEGLSHLISIIKDDLEDIKLV 494

[Close]

BLAST of MELO3C011875 vs. ExPASy Swiss-Prot
Match: P70582 (Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 53/204 (25.98%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 174 PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQ 233
           P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 304 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 363

Query: 234 SNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAE 293
            ++  LQ++    T+  + + K+K   L  R L+V+   E     G  +     E +L  
Sbjct: 364 EDISELQKN-QTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQA--EEEQLRV 423

Query: 294 KLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVL 353
           +L  I  +L  +  +   R+  L++  R Q N  G   ++  +    I    L ++++ L
Sbjct: 424 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ-NHFG---AVKSEEKYYIDADLLREIKQHL 483

Query: 354 QQQTEAIARLGNVLKRDVRDMEII 378
           +QQ E ++ L +++K D+ D++++
Sbjct: 484 KQQQEGLSHLISIIKDDLEDIKLV 494

[Close]

BLAST of MELO3C011875 vs. ExPASy Swiss-Prot
Match: Q7Z3B4 (Nucleoporin p54 OS=Homo sapiens OX=9606 GN=NUP54 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 52/204 (25.49%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 174 PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQ 233
           P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 301 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 360

Query: 234 SNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAE 293
            ++  LQ++    ++  + + K+K   L  R L+V+   E     G  +     E +L  
Sbjct: 361 EDISELQKN-QTTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQA--DEEQLRV 420

Query: 294 KLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVL 353
           +L  I  +L  +  +   R+  L++  R Q N  G   ++  +    I    L ++++ L
Sbjct: 421 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ-NHFG---AVRSEERYYIDADLLREIKQHL 480

Query: 354 QQQTEAIARLGNVLKRDVRDMEII 378
           +QQ E ++ L +++K D+ D++++
Sbjct: 481 KQQQEGLSHLISIIKDDLEDIKLV 491

[Close]

BLAST of MELO3C011875 vs. ExPASy TrEMBL
Match: A0A5A7SSX4 (Nuclear pore complex protein NUP54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002170 PE=4 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 5.4e-207
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120
           TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180
           LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240
           MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300
           RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           ARLGNVLKRDVRDMEIIMAEDKEMADDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MELO3C011875 vs. ExPASy TrEMBL
Match: A0A1S3BE47 (nuclear pore complex protein NUP54 OS=Cucumis melo OX=3656 GN=LOC103488894 PE=4 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 5.4e-207
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120
           TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180
           LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240
           MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300
           RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           ARLGNVLKRDVRDMEIIMAEDKEMADDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MELO3C011875 vs. ExPASy TrEMBL
Match: A0A0A0KPW8 (Nup54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589970 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.0e-202
Identity = 378/389 (97.17%), Postives = 383/389 (98.46%), Query Frame = 0


Query: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQ SSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120
           TSSFATGFGSSLFSTPFSSQPSQQQQQLQQS +FPQSSATGFGFQTPF APQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180
           LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDI 180

Query: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240
           MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300
           RHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELS+RVQNLLT+TRGQANGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           ARLGNVLKRDVRDMEIIMAEDKEMADDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MELO3C011875 vs. ExPASy TrEMBL
Match: A0A6J1DDY9 (nuclear pore complex protein NUP54 OS=Momordica charantia OX=3673 GN=LOC111019650 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 5.3e-186
Identity = 356/389 (91.52%), Postives = 365/389 (93.83%), Query Frame = 0


Query: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 180

Query: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 380

[Close]

BLAST of MELO3C011875 vs. ExPASy TrEMBL
Match: A0A6J1G105 (nuclear pore complex protein NUP54 OS=Cucurbita moschata OX=3662 GN=LOC111449684 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.4e-185
Identity = 351/388 (90.46%), Postives = 366/388 (94.33%), Query Frame = 0


Query: 2   FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPST 61
           FG   S+ AFGTPQSTPAFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPS+
Sbjct: 20  FGTPQSTPAFGTPQSTPAFGTPQSTPAFGTPQSTPAFGTPSASPAFGNFSSTPAFGTPSS 79

Query: 62  SSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQL 121
           SSFATGFGSSLFSTPFSSQPSQQQQ  QQS LF   +ATGFGFQTPFAAPQS+PFPNAQL
Sbjct: 80  SSFATGFGSSLFSTPFSSQPSQQQQ--QQSPLFQLPAATGFGFQTPFAAPQSSPFPNAQL 139

Query: 122 TTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIM 181
           TTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKP GVSDIM
Sbjct: 140 TTQMAPVAPLPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTDPQYRAKPAGVSDIM 199

Query: 182 WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQR 241
           WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQR
Sbjct: 200 WAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKTLQR 259

Query: 242 HFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ 301
           HFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP++ GEAELAE+LALITRQ
Sbjct: 260 HFLADTLPWIQRLKQKEQGLQRRLLRMMRVVEALESKGCRVPIMTGEAELAERLALITRQ 319

Query: 302 LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIA 361
           L+GSGAELS+RV+NLLTIT GQANGSG GNSIYLQGS KIHEQSLADMQEVLQQQTEAIA
Sbjct: 320 LRGSGAELSRRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLADMQEVLQQQTEAIA 379

Query: 362 RLGNVLKRDVRDMEIIMAEDKEMADDAS 390
           RLG VLKRDVRDMEIIMAEDKEM DD S
Sbjct: 380 RLGTVLKRDVRDMEIIMAEDKEMIDDLS 405

[Close]

BLAST of MELO3C011875 vs. TAIR 10
Match: AT1G24310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink). )

HSP 1 Score: 500.0 bits (1286), Expect = 1.8e-141
Identity = 270/378 (71.43%), Postives = 317/378 (83.86%), Query Frame = 0


Query: 20  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFS 79
           FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFS
Sbjct: 2   FGTPSSSPSFGTPSSTPAFGT--SSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFS 61

Query: 80  SQPSQQQQQLQQ----STLFPQSSATGFGFQTPF----AAPQSTPFPNAQLTTQMAPVAP 139
           SQ  QQQQQ QQ    S+LF Q  ++ FGFQ+PF       Q TPFPNAQLTTQMAPVAP
Sbjct: 62  SQQPQQQQQQQQQQQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAP 121

Query: 140 LPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLE 199
           +P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLE
Sbjct: 122 IPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSKLE 181

Query: 200 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPW 259
           GM+S +RERLWPQLVQGFKDLSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P 
Sbjct: 182 GMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSNVKMLQRHLQASTFPS 241

Query: 260 VQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELS 319
           ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Sbjct: 242 IERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKLTAITRQVKGPGAELS 301

Query: 320 KRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRD 379
           +RVQ+L TI+R QAN    G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD
Sbjct: 302 RRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQETEAIGRLGNVLKRD 361

Query: 380 VRDMEIIMAEDKEMADDA 389
           +RDMEI++AED EMA D+
Sbjct: 362 MRDMEIMVAEDTEMALDS 377

The following BLAST results are available for this feature:

BLAST of MELO3C011875 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446043.1	1.1e-206	100.00	PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo] >KAA0034202.1 nucle...	[more]
XP_004135312.1	8.3e-202	97.17	nuclear pore complex protein NUP54 [Cucumis sativus] >KGN51680.1 hypothetical pr...	[more]
XP_038893426.1	8.6e-199	96.40	nuclear pore complex protein NUP54 [Benincasa hispida]	[more]
XP_023515339.1	1.7e-186	92.01	nuclear pore complex protein NUP54-like [Cucurbita pepo subsp. pepo]	[more]
KAG6573649.1	1.7e-186	90.72	Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of MELO3C011875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYF7	2.5e-140	71.43	Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana OX=3702 GN=NUP54 PE=1...	[more]
Q9VDV3	1.8e-10	41.61	Nuclear pore complex protein Nup58 OS=Drosophila melanogaster OX=7227 GN=Nup58 P...	[more]
Q8BTS4	4.2e-07	25.98	Nuclear pore complex protein Nup54 OS=Mus musculus OX=10090 GN=Nup54 PE=1 SV=1	[more]
P70582	4.2e-07	25.98	Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 S...	[more]
Q7Z3B4	1.6e-06	25.49	Nucleoporin p54 OS=Homo sapiens OX=9606 GN=NUP54 PE=1 SV=2	[more]

BLAST of MELO3C011875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSX4	5.4e-207	100.00	Nuclear pore complex protein NUP54 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BE47	5.4e-207	100.00	nuclear pore complex protein NUP54 OS=Cucumis melo OX=3656 GN=LOC103488894 PE=4 ...	[more]
A0A0A0KPW8	4.0e-202	97.17	Nup54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589970 PE=4 ...	[more]
A0A6J1DDY9	5.3e-186	91.52	nuclear pore complex protein NUP54 OS=Momordica charantia OX=3673 GN=LOC11101965...	[more]
A0A6J1G105	3.4e-185	90.46	nuclear pore complex protein NUP54 OS=Cucurbita moschata OX=3662 GN=LOC111449684...	[more]

BLAST of MELO3C011875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24310.1	1.8e-141	71.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 339..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR13000:SF0	NUCLEOPORIN P54	coord: 1..383
IPR025712	Nucleoporin Nup54, alpha-helical domain	PFAM	PF13874	Nup54	coord: 173..317 e-value: 5.6E-29 score: 101.0
IPR024864	Nucleoporin Nup54/Nup57/Nup44	PANTHER	PTHR13000	NUCLEOPORIN P54	coord: 1..383

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011875.1	MELO3C011875.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005643	nuclear pore