MELO3C011733.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C011733.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	(thale cress) hypothetical protein
Location	chr10: 5352626 .. 5353937 (+)
RNA-Seq Expression	MELO3C011733.jh1
Synteny	MELO3C011733.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAATCTCAGGGCTTCAAACACACAAAATTAAAAAAAGAAATCCTTCAAGAATAAGCCTAGTTCCTTCTTCTTCGTCCCCTTTTTTTCTGTATATATAATCTCATCTCACACATATTCTTCCTTCCATTCAACTCTCTCCTCTCTCTCTTTGCTTGTGATCAGAGATGGGTTTGGTGGTGGTGATCTCTCTACCATTAATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGTCGAGCAAAAGGGAGACAAGACATACGGACTAATGCGCAGATATTCGGTGTTCCCACGCCACCACCTGGTAGTGGTGCAGCTCATTCGCCATCGTCACAGCAGCCGGTTTTCAAACCTGAAAATACCACCAATGTTTGATTAGTAGTCAGATCTAAGTTCAATTCTTCACTGTACTACTGTTTGTGACTTTGTGTATGTAAATTCTGTGCTATGAGTTTAAACTTCAATACTCTATGGGTGAATCATTTTTCCAGTTATATTGTATGTCCTACAAGTTTTTGTGCATTAAATCAAATAGACTGACCTTCAAAGTTCGCTGCCATGATGATTCCTCAACCCTTTTGCAGCTGCAATGCTTGATTAAGAACCCACAAAATATTTGGAATCAATCAATATGAAAGGACAAATAACATACACCGAATCAATTGCATGATTTTATAATTGGCTCAATGTATTATACAATGAAGAATAGTTTTTATCTGCCGTTCTTTTCTCTCCTAGCATCTCTTGGTAGCTAAGGTATTGTAATGCATGAAGGTAAGAATACAATCCACACCACAAACCAGAGACCAAGTAATGACGGTTGTTTTTTCACATGAATCAACAGGTTTAGAGTTGTTTCGTAGTCTCTATTCCTGGAGGAGATTGCGGTGGGACGGCATATTCATGCCACTTGTTGGCGTCAATTTTCAGGGCCTTCCTTGCAGTTGCTTGGTAGTTTTTACTTCTTCCTAGCCTCCTTGATGGAAGAGATTGAGACGCAACGGCTTTGCTCGAGTTACTGCTAGTGATGGATGATAAAAATTTATCCTTTGATTGTGATGCAGAAGCAGATGCAATAACAGAATCGAAGATGCCACTCTCCCTTAATCCCTGTATGATCACCTGAACCATAAATAGATTGGAAAATTATCTAACTGGGTGCAATAAGTTAGATATTAATCCAAAGTGAAGTTTGTAACTGAATTGGTTTTAAATGAACAGTTAAATGACTTTTTAACTCTTTCTAATTTGTCACTACAGATATCAAATAAAAGTCTTACCATAGGAGCATTGATTCGTGTTAAA

mRNA sequence

TAGAATCTCAGGGCTTCAAACACACAAAATTAAAAAAAGAAATCCTTCAAGAATAAGCCTAGTTCCTTCTTCTTCGTCCCCTTTTTTTCTGTATATATAATCTCATCTCACACATATTCTTCCTTCCATTCAACTCTCTCCTCTCTCTCTTTGCTTGTGATCAGAGATGGGTTTGGTGGTGGTGATCTCTCTACCATTAATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGTCGAGCAAAAGGGAGACAAGACATACGGACTAATGCGCAGATATTCGGTGTTCCCACGCCACCACCTGGTAGTGGTGCAGCTCATTCGCCATCGTCACAGCAGCCGGTTTTCAAACCTGAAAATACCACCAATGTTTGATTAGTAGTCAGATCTAAGTTCAATTCTTCACTGTACTACTGTTTGTGACTTTGTGTATGTAAATTCTGTGCTATGAGTTTAAACTTCAATACTCTATGGGTGAATCATTTTTCCAGTTATATTGTATGTCCTACAAGTTTTTGTGCATTAAATCAAATAGACTGACCTTCAAAGTTCGCTGCCATGATGATTCCTCAACCCTTTTGCAGCTGCAATGCTTGATTAAGAACCCACAAAATATTTGGAATCAATCAATATGAAAGGACAAATAACATACACCGAATCAATTGCATGATTTTATAATTGGCTCAATGTATTATACAATGAAGAATAGTTTTTATCTGCCGTTCTTTTCTCTCCTAGCATCTCTTGGTAGCTAAGGTATTGTAATGCATGAAGGTAAGAATACAATCCACACCACAAACCAGAGACCAAGTAATGACGGTTGTTTTTTCACATGAATCAACAGGTTTAGAGTTGTTTCGTAGTCTCTATTCCTGGAGGAGATTGCGGTGGGACGGCATATTCATGCCACTTGTTGGCGTCAATTTTCAGGGCCTTCCTTGCAGTTGCTTGGTAGTTTTTACTTCTTCCTAGCCTCCTTGATGGAAGAGATTGAGACGCAACGGCTTTGCTCGAGTTACTGCTAGTGATGGATGATAAAAATTTATCCTTTGATTGTGATGCAGAAGCAGATGCAATAACAGAATCGAAGATGCCACTCTCCCTTAATCCCTGTATGATCACCTGAACCATAAATAGATTGGAAAATTATCTAACTGGGTGCAATAAGTTAGATATTAATCCAAAGTGAAGTTTGTAACTGAATTGGTTTTAAATGAACAGTTAAATGACTTTTTAACTCTTTCTAATTTGTCACTACAGATATCAAATAAAAGTCTTACCATAGGAGCATTGATTCGTGTTAAA

Coding sequence (CDS)

ATGGGTTTGGTGGTGGTGATCTCTCTACCATTAATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGTCGAGCAAAAGGGAGACAAGACATACGGACTAATGCGCAGATATTCGGTGTTCCCACGCCACCACCTGGTAGTGGTGCAGCTCATTCGCCATCGTCACAGCAGCCGGTTTTCAAACCTGAAAATACCACCAATGTTTGA

Protein sequence

MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQPVFKPENTTNV

Homology

[Close]

BLAST of MELO3C011733.jh1 vs. NCBI nr
Match: XP_008445862.1 (PREDICTED: uncharacterized protein LOC103488752 [Cucumis melo] >KAA0034055.1 uncharacterized protein E6C27_scaffold65G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (364), Expect = 1.69e-43
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of MELO3C011733.jh1 vs. NCBI nr
Match: XP_038891972.1 (uncharacterized protein LOC120081297 [Benincasa hispida])

HSP 1 Score: 142 bits (357), Expect = 1.98e-42
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKP+N+TNV
Sbjct: 61 PVFKPDNSTNV 71

[Close]

BLAST of MELO3C011733.jh1 vs. NCBI nr
Match: XP_004143612.1 (uncharacterized protein LOC101203814 [Cucumis sativus] >KGN50461.1 hypothetical protein Csa_000697 [Cucumis sativus])

HSP 1 Score: 142 bits (357), Expect = 1.98e-42
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of MELO3C011733.jh1 vs. NCBI nr
Match: XP_022999592.1 (uncharacterized protein LOC111493917 [Cucurbita maxima])

HSP 1 Score: 123 bits (309), Expect = 4.20e-35
Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLV+VISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQ FGVP PPP S AAHS S QQ
Sbjct: 1  MGLVMVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQTFGVPMPPPSSAAAHSLSPQQ 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PIFKPDNSINV 71

[Close]

BLAST of MELO3C011733.jh1 vs. NCBI nr
Match: XP_022988565.1 (uncharacterized protein LOC111485766 [Cucurbita maxima])

HSP 1 Score: 117 bits (294), Expect = 8.17e-33
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGS  AH P   +
Sbjct: 1  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSRLAHPPPPPE 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PLFKPDNSANV 71

[Close]

BLAST of MELO3C011733.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SXY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00410 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 8.19e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of MELO3C011733.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BED6 (uncharacterized protein LOC103488752 OS=Cucumis melo OX=3656 GN=LOC103488752 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 8.19e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of MELO3C011733.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KRY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175840 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 9.59e-43
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of MELO3C011733.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KB93 (uncharacterized protein LOC111493917 OS=Cucurbita maxima OX=3661 GN=LOC111493917 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 2.03e-35
Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLV+VISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQ FGVP PPP S AAHS S QQ
Sbjct: 1  MGLVMVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQTFGVPMPPPSSAAAHSLSPQQ 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PIFKPDNSINV 71

[Close]

BLAST of MELO3C011733.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JJX6 (uncharacterized protein LOC111485766 OS=Cucurbita maxima OX=3661 GN=LOC111485766 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 3.96e-33
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGS  AH P   +
Sbjct: 1  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSRLAHPPPPPE 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PLFKPDNSANV 71

[Close]

BLAST of MELO3C011733.jh1 vs. TAIR 10
Match: AT1G31335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 1.6e-21
Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLG+++GR++IRTN Q++G P PPPG+ AA SP    
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGKSRGRREIRTNPQVYGAPAPPPGAIAASSP-PLS 60

Query: 61 PVFKPENTTNV 72
          P  KP+N+ NV
Sbjct: 61 PHAKPDNSHNV 70

The following BLAST results are available for this feature:

BLAST of MELO3C011733.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445862.1	1.69e-43	100.00	PREDICTED: uncharacterized protein LOC103488752 [Cucumis melo] >KAA0034055.1 unc...	[more]
XP_038891972.1	1.98e-42	97.18	uncharacterized protein LOC120081297 [Benincasa hispida]	[more]
XP_004143612.1	1.98e-42	98.59	uncharacterized protein LOC101203814 [Cucumis sativus] >KGN50461.1 hypothetical ...	[more]
XP_022999592.1	4.20e-35	84.51	uncharacterized protein LOC111493917 [Cucurbita maxima]	[more]
XP_022988565.1	8.17e-33	77.46	uncharacterized protein LOC111485766 [Cucurbita maxima]	[more]

BLAST of MELO3C011733.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C011733.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SXY6	8.19e-44	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BED6	8.19e-44	100.00	uncharacterized protein LOC103488752 OS=Cucumis melo OX=3656 GN=LOC103488752 PE=...	[more]
A0A0A0KRY6	9.59e-43	98.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175840 PE=4 SV=1	[more]
A0A6J1KB93	2.03e-35	84.51	uncharacterized protein LOC111493917 OS=Cucurbita maxima OX=3661 GN=LOC111493917...	[more]
A0A6J1JJX6	3.96e-33	77.46	uncharacterized protein LOC111485766 OS=Cucurbita maxima OX=3661 GN=LOC111485766...	[more]

BLAST of MELO3C011733.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31335.1	1.6e-21	69.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..71
None	No IPR available	PANTHER	PTHR33727	OS07G0446900 PROTEIN	coord: 1..70
None	No IPR available	PANTHER	PTHR33727:SF15	BNACNNG19470D PROTEIN	coord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011733.jh1.t1	MELO3C011733.jh1.t1	mRNA