MELO3C011718.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C011718.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	elongator complex protein 6
Location	chr10: 5516001 .. 5520587 (-)
RNA-Seq Expression	MELO3C011718.jh1
Synteny	MELO3C011718.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGCTCCGACTTGTCGCCGCCCTAAAATCGAGAACCATAATGGACCGAATGGCTTCGAATTTGCTTGATGGAGCTATAGGTTTTGACGATCCCACCAATCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTGCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTAACTCTTCCAATGCCGTCATCTTCCTTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCATCCTCAGGAAGCTGGTGCGTTATCGCCCTTTCTATATGGATGTTTATTGGTTACTTGTTGGGTGAATTGGGTGATGGAGTTATTTTGATTCTTGTCTGAGTTTCTATTGCTCATTTGAATTTTGTTGTTGGTGAGGAACCGTGGTGGAGATATATTAGAAGGTTGTAGTGCAGGTGTAATGGAGTATCCTTGATTTCTCACCGTTGCTATCAGTGTTTTCAACATAATGGGTTTTAAGAATTTTCACGGATATGAGTTGTTTGAAGAATCCGTTATTGGGTGATTTACTGACTTTCTTTTCAGTGCAATGAAGTTTATGAAATTTTTAAGGCTAGTTTGATAACTGTCTGTTTTTTTATTTTTGAAAAGTAAGCTTTCTTCTGCCTGTGCCTATGGAGTTCTTTGTTTTGTTGTCCTCTTTTTAGGGATGTTCTCAAAATCAAAACTAAAAAATAGAGTAGTTTTTTAAAACTTGTTTTTGTTTTTGAAATTTGGCTATGTATAAGATATGTATGGTAAAGAAATGATAAGAAAATAAACACAATTTTTAAAACCAAAAAGTTATCTAACGGAACCGGAATGATTAACAAGCATATACAGGGACATTTGGACTTAACTTGCATTTTAGTGATAAAAATTTGAAAATAGTAATCTTGATGTTGGATCTCTCTTCCCATTCATCTATTATCTGTTGTGCTAAGATTCTGTCAAAATTACTTTAATTTAGTGTTCAGAATGAGATGTGCTCATGCGGAACTATTTCTTAATCAGGGGTGTAACTTAGCGGCTCAAAGGGATAACGGTAGGTTCGTATTCTTTGACATGCTTACGCTGGGCTGTTCAGGTGAGAAAACCAGGTATAAGATCCTCATTTAAGCGTATGATCTTATTCCCTCCCCATTTCCTTCTTTTTTGCATCTTTTAAAGTAGTTTTATTTCCAACTTGTATAGAAGATGATTTAGTTACACTTGGGAAGGTTTGGTTACACATCCAGCTATTGATGGGAAGTAGGTTCTTTCCCCCACCCCTTCTACATTTGCAGTGAAGAATTTCCTTTTCATAATTCATTGACACTACATACTTCCTCATCACCGAGCTTGGATATCTGGATATCCATGAAATATGGATGGCTAGGGTTTTTTGTTTTTTCCAGCTTCAATTTAAAACAGAAAAATGTACCTTTTTTAATTTATTTATTATGTTTTTTTTTCTTTTTTGAAGATGAAACAAGAATTTCATTGATGAATACAAAAGAGGAAGCACAAACTTCCAAAAAATAATTCCGCTTAGCTAAAAGATTAATGAGATTAGTTCTTGAAGAACTTTGTACCCGATTCCAACCAAGAGCATTAAAGAGAACCAAATCACTAAGAAGATCATAGGTCTTAGCTTTGTCAGAGATTGGCTGTGTGCCAACTTAGGTGCTTCCAAAATCGAGGACCAAAAGTGCCCAAGAAAGGAACAAGCTTATAAAGTCAGATGGATGGGGATAAGTTTTGATGCGGTAGATTCTTCTGCAGTCTATCATTGGTGTCGATATTGTTTTGGCTGAGCTCCCAAAGGAAATCTTTGGTCTTCTAGGGTACTTTCCAAGTTTCCATCCTAAAGCCATGTATTGAGGGGCCTTTCTCGCTGTTTTGGTTCTCTTGGAGAGGTTGGTTATAGGATCCCACCGAGTAAATAGTGGATAGTTCCATTGGCCAAACCTGTTTATCCACAGCATTTGAAAGAGTACTCGTTTTAGCAATTCTAGCAAGGAAGCCTCTCGTTGATCTCATTTTCCTTTAAGTTTCTATGTAGGTCAAGAGTCCATGTCTTGAAGGTTTGATTCCAGCTTTCTGAAATGAAACCATATGGCTTGTATGTTCATCTGTAATGACTAAAGATTGGGGAAGGATTCGGCTAACGAGCTAGCATCAATGCATTGCTCGTTCTAGAATGATGTATCCTTCGTTCTAGAATGATGTATCCTAAACCCTAAACTATGTCTATTTTCTTTTTAATATTGCTATTTGACATTTTTAGTTTTTAATTTTTGGCACTATTCTAGATAAAAAACATGCATGCTACATAATAATTGTTTTTTTTTCTAAACAAAAGATATGCACCATAATGATTGAAATACTAATAAAATACCTAATGAAGAAATTAGTTTTAAGAGTATATTTATACCACTAGTTCAGTTTGGTTTTCATTGATTTTTCCAACCAATATCTGATCCAAACCAATACTTTTTGGTTTTCTCCAAATACAAACCAAGATGTCCAATTTGATACTAAAAAACCAAACCAAACCATTGGATCAGTTTGGATTGGTTTGGTCTTTTAGTTTGTCGGTTTTTCTGTTTTTTGTATCACCCCTAATCCTTGCCATCACCAATTTTTTGCCTGCAAAAGGTCTTTAATGCTGCTAGACAGCTGGAGATGTATGGCTGACGGGCTTTGGAGGATAATTCCCTAGCAAGGGTCAGATAAGTGATACTTAGAAGTTAGACATAGTCACATATTAACCTTCCTTTAGAGGTTGTCTTTCATTTGTGAATCTTCTAATCCATCCAGCAAGTTGAGCTTCATTTTTATTTTTATTATTATTATTATTTACACAGCCAATGCCCAAGCCTCCAACTCAAGGTTGGGGGGCTTATTCGTACTATCCCATGTAACGTTGTGCATCCATTTCTCCAACTTAGGCCCTACCCAAAATAATTTACAGAACTTCTCTGTCATGTGTTCCATGGTTGGCTTTAAAAGGTGGTTGACTTTCCATTATGTATTTTATGGTAATTGAATCTTTCATATGATGCAAAATTTTCTGCTACCAGATAGAAGTGGAAAGGAAACAGATGAAGGTGTTCTTGTTGGGTTGTACTGCAAGATCCAGAGAGCTGTTGATGCATTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATTGATGATATATCTCTTTTGGAGGTTGCTGCCAATGGTTCTTCAAATCTTGTCTTAGACTTCCTTCATTATTGCCACACTTTATTATCAGAAGTTGTAAGACCCTTTGTGCTAACTGAATTCTTCTCTTCTTCACATATCCTTTGAAATGTTGTCACATTCAATCTCCAGTATTCATTCTTCACATATTCTTGTCAATGTTGTCATATTCAAACTCCAGTATTCGCACTTTGCTCTTGCCACAGGGTTGTTCCATAATTGCACTCGATCACGAAGATGTTTACATGGACATCAAAAGACCATTGAGTCTACAGTTGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGGTACAGTTTCTTGTTCTTTTAACTTTCATGTTTATCAATATCATTTTATACACCTATTTACGTTTGAATTATTCCCCTCTACATCTTCCTTGGTCGAGAATTATGCAACAACTCTAATGTATCAAAAAAAGAAAAAAGAGAGAGAGAACTCTTCCTGATCTTAATTACCAAGAATGTCCTCCAGATTGCTGACCCTATATGTGAGGGGCTGTCGCTGTTGATTTCATTATTTTCTCAATAATGTGATTGTATGGTGCATAGTTATCTATATGCCAATAATTTCGTACAAGTGTCGTGCTACAAGCAAGGGAAAAAAGATAAGAGGCTCTCTTGACCCCACTTTCATTAATTTTTTTCCCAACTGTGCTTGTATATATCTGACTCTTCTAGATGTAACTTTAGTTGGTATATACCGTTGAGAGTAAAGATACGAATAATCTACTGCTTACATATATCTTTTTGTAAAATGTCAACTAAATTGTCAAGCTGCTAATCATACATTTTTTCCTGTTTTGTCGTTTGAACCGAATTTGTTTATAATTTACTGCTGCGACTTGTTTGAGCGTTGTTGGACATGTTTCATTTGCTTCTCTGCAGTTGACAGTTTTGAACAAACCCGTTGAAGGCCTGCAAGACAAGTTAAGAAACAGAGTACAGAATTTTCAGTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTAAGGATAGTCTAGGGCAAGAAAAGTAGGAAGATTTGATATTAATACCCTTGTAGCGTACCCTTTTGGCTTTCATTAGCCTGGCTTTGAAGGCGCTCTATTAAGATTCGCACTTGCAGAAAAAGATTCCTTGTACTGCAGTTAGATTGTTTCTAGTGAAACCATTCGAGACGTCTACCTCTTTAACCTTTCAAATGCTGTTTTTATTTGTAAGTTTGTTTTTTTTTTCTTTTGTTTTATTATTTACTAAAAGTTAAGAGTGCTGTTCTTTTTGTTTTGTTTTAAA

mRNA sequence

CTCTGCTCCGACTTGTCGCCGCCCTAAAATCGAGAACCATAATGGACCGAATGGCTTCGAATTTGCTTGATGGAGCTATAGGTTTTGACGATCCCACCAATCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTGCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTAACTCTTCCAATGCCGTCATCTTCCTTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCATCCTCAGGAAGCTGGGGTGTAACTTAGCGGCTCAAAGGGATAACGGTAGGTTCGTATTCTTTGACATGCTTACGCTGGGCTGTTCAGATAGAAGTGGAAAGGAAACAGATGAAGGTGTTCTTGTTGGGTTGTACTGCAAGATCCAGAGAGCTGTTGATGCATTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATTGATGATATATCTCTTTTGGAGGTTGCTGCCAATGGTTCTTCAAATCTTGTCTTAGACTTCCTTCATTATTGCCACACTTTATTATCAGAAGTTGGTTGTTCCATAATTGCACTCGATCACGAAGATGTTTACATGGACATCAAAAGACCATTGAGTCTACAGTTGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGTTGACAGTTTTGAACAAACCCGTTGAAGGCCTGCAAGACAAGTTAAGAAACAGAGTACAGAATTTTCAGTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTAAGGATAGTCTAGGGCAAGAAAAGTAGGAAGATTTGATATTAATACCCTTGTAGCGTACCCTTTTGGCTTTCATTAGCCTGGCTTTGAAGGCGCTCTATTAAGATTCGCACTTGCAGAAAAAGATTCCTTGTACTGCAGTTAGATTGTTTCTAGTGAAACCATTCGAGACGTCTACCTCTTTAACCTTTCAAATGCTGTTTTTATTTGTAAGTTTGTTTTTTTTTTCTTTTGTTTTATTATTTACTAAAAGTTAAGAGTGCTGTTCTTTTTGTTTTGTTTTAAA

Coding sequence (CDS)

ATGGACCGAATGGCTTCGAATTTGCTTGATGGAGCTATAGGTTTTGACGATCCCACCAATCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTGCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTAACTCTTCCAATGCCGTCATCTTCCTTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCATCCTCAGGAAGCTGGGGTGTAACTTAGCGGCTCAAAGGGATAACGGTAGGTTCGTATTCTTTGACATGCTTACGCTGGGCTGTTCAGATAGAAGTGGAAAGGAAACAGATGAAGGTGTTCTTGTTGGGTTGTACTGCAAGATCCAGAGAGCTGTTGATGCATTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATTGATGATATATCTCTTTTGGAGGTTGCTGCCAATGGTTCTTCAAATCTTGTCTTAGACTTCCTTCATTATTGCCACACTTTATTATCAGAAGTTGGTTGTTCCATAATTGCACTCGATCACGAAGATGTTTACATGGACATCAAAAGACCATTGAGTCTACAGTTGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGTTGACAGTTTTGAACAAACCCGTTGAAGGCCTGCAAGACAAGTTAAGAAACAGAGTACAGAATTTTCAGTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTAA

Protein sequence

MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAVIFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYCKIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALDHEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENGTEFFYSGSRA

Homology

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BLAST of MELO3C011718.jh1 vs. NCBI nr
Match: XP_008445832.1 (PREDICTED: elongator complex protein 6 [Cucumis melo] >KAA0034041.1 elongator complex protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 514 bits (1325), Expect = 6.81e-184
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV
Sbjct: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC
Sbjct: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSII+LD
Sbjct: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIISLD 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ
Sbjct: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSRA
Sbjct: 241 NFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of MELO3C011718.jh1 vs. NCBI nr
Match: XP_011654922.1 (elongator complex protein 6 [Cucumis sativus] >KGN50480.1 hypothetical protein Csa_000558 [Cucumis sativus])

HSP 1 Score: 484 bits (1245), Expect = 9.58e-172
Identity = 247/260 (95.00%), Postives = 251/260 (96.54%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           MDRM SNLLD AIGFDDPT   PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSP+SSN V
Sbjct: 1   MDRMTSNLLDEAIGFDDPT---PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IFLAFSQSF+HYDRILRKLGCNLAAQRD+GRFVFFDMLTLGCSDRSGKET EGVLVGLYC
Sbjct: 61  IFLAFSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAV ALIQENKKHVTIVIDDISLLEVAANGSSN VLDFLHYCHTLLSEVGCSIIALD
Sbjct: 121 KIQRAVHALIQENKKHVTIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALD 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVYMDI+RPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ
Sbjct: 181 HEDVYMDIERPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSRA
Sbjct: 241 NFQFYIKENGTEFFYSGSRA 257

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BLAST of MELO3C011718.jh1 vs. NCBI nr
Match: XP_038893352.1 (elongator complex protein 6 [Benincasa hispida])

HSP 1 Score: 470 bits (1209), Expect = 3.28e-166
Identity = 232/260 (89.23%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           M+RM SNLLD AIGFDDPT PSPLIGR+LLVEDCVETSGAFVLHHLLKRAFSSP+SSNAV
Sbjct: 1   MNRMTSNLLDEAIGFDDPTKPSPLIGRMLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IF+AFSQSFVHYDR+LRKLGCNLAAQRD+GRF+FFDMLTLGCSDRSGKE+ EGVLVGLYC
Sbjct: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSGRFIFFDMLTLGCSDRSGKESGEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAV+ALIQENK+HVTI+IDDI LLEVAANGSS  VLDFLHYCHTL SE+GCSIIAL+
Sbjct: 121 KIQRAVNALIQENKRHVTIMIDDIPLLEVAANGSSTHVLDFLHYCHTLTSEIGCSIIALN 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVY+DI+RPL LQ+EYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRV 
Sbjct: 181 HEDVYVDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVH 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NF FYIKENGTEFFYSGS+A
Sbjct: 241 NFHFYIKENGTEFFYSGSKA 260

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BLAST of MELO3C011718.jh1 vs. NCBI nr
Match: XP_022139240.1 (elongator complex protein 6 [Momordica charantia])

HSP 1 Score: 460 bits (1183), Expect = 3.01e-162
Identity = 226/260 (86.92%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           MDRMASN+LD A+G DDP  PSPLIGRLLLVEDCVETSGAF+LHHLLKR+ SSP SSNAV
Sbjct: 1   MDRMASNMLDEALGLDDPAKPSPLIGRLLLVEDCVETSGAFLLHHLLKRSLSSPQSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IF+AFSQ F HYDR+LRKLGCNL AQRD+GRF+FFDMLTLGCSDRSGKETDEGVLVGLYC
Sbjct: 61  IFIAFSQXFAHYDRVLRKLGCNLVAQRDSGRFIFFDMLTLGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAV+ALIQ+NKKHVTIVIDDI LLEVAANGSSN VLDFLHYCHTL SE+GCS+IAL+
Sbjct: 121 KIQRAVNALIQQNKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSLIALN 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVYMD +RP  LQ+EYLADVLIKVGPLATGIAKDVHGQLTVLNKPV GLQD LRNRV+
Sbjct: 181 HEDVYMDTERPRILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQDNLRNRVR 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSR 
Sbjct: 241 NFQFYIKENGTEFFYSGSRT 260

[Close]

BLAST of MELO3C011718.jh1 vs. NCBI nr
Match: XP_022957322.1 (elongator complex protein 6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 456 bits (1172), Expect = 1.43e-160
Identity = 227/260 (87.31%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           M RM SNLLD AIG DD TN SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSP+SSNAV
Sbjct: 1   MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IF+AFSQSFVHYDR+LRKLGCNLAAQRD+ RF F DMLT+GCSDRSGKETDEGVLVGLYC
Sbjct: 61  IFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAV ALIQENK+HVTI+IDDI LLEVAANGSSN VLDFLHYCHTL SE+GCSIIAL 
Sbjct: 121 KIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVY+DI+RPL LQ+EYLA++LIKVGPLATGIAKDVHGQLTVLNKPV GLQ+ LRNRV 
Sbjct: 181 HEDVYLDIERPLILQMEYLAEILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVH 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSRA
Sbjct: 241 NFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy Swiss-Prot
Match: Q8L9Y2 (Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-74
Identity = 148/264 (56.06%), Postives = 192/264 (72.73%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDP-TNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNA 60
           MDR + NLLD A+GFD+    PSPL G+++L+EDCVETSG+FVLH L+KR  SS NSS+A
Sbjct: 1   MDR-SLNLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSDA 60

Query: 61  VIFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           +IFLAF++ F HYDRILRKLGCNLA  + N R VFFDML + CSD    E +   +  L+
Sbjct: 61  LIFLAFARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKLF 120

Query: 121 CKIQRAVDALIQENKKHVTIVIDDISLLEVAANGS-SNLVLDFLHYCHTLLSEVGCSIIA 180
            +IQ  V  L      ++T+++DD+SLLE+A  GS S+ VLDFLHYCHTL SE  CS++ 
Sbjct: 121 REIQETVRKLQSVTSGNITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLVI 180

Query: 181 LDHEDVYMDIKRP-LSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGL-QDKLR 240
           L+HED+Y  ++RP   LQ+  LADV+IK  PLA+G+A DVHGQLTVLNK +    +   R
Sbjct: 181 LNHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSSR 240

Query: 241 NRVQNFQFYIKENGTEFFYSGSRA 261
           N++QNFQF IKENG ++FY G R+
Sbjct: 241 NKLQNFQFRIKENGIDYFYPGCRS 262

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy Swiss-Prot
Match: Q0IHA2 (Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.9e-18
Identity = 74/257 (28.79%), Postives = 131/257 (50.97%), Query Frame = 0


Query: 19  TNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAVIFLAFSQSFVHYDRILRK 78
           T  +  +G+  L+ D   T G+F++HH L        +   V F+A  QSF HY+ + +K
Sbjct: 12  TTDTLTLGKFTLLCDS-NTDGSFLVHHFLSYYL---RAGCRVCFVALVQSFSHYNIVAQK 71

Query: 79  LGCNLAAQRDNGRFVFFDML----TLGCSDRSGKETDEGV--------LVGLYCKIQRAV 138
           LG NL++ +D G+ VF + L     L   D+S  E    +        L  LY  +  A+
Sbjct: 72  LGVNLSSAKDEGQLVFLEGLKSYTDLLFGDKSEAEETNPLCFLRAGSDLRPLYSFVSAAL 131

Query: 139 DALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCH-TLLSEVGCSIIALDH-EDV 198
                +  K   +++DD+S+L ++   +S  VLDF+HYC  T+ ++   +++ L H  + 
Sbjct: 132 APSAGQPWKCPVLILDDLSVL-LSLGVTSLQVLDFMHYCRATVCTQYKGNVLCLVHGAEE 191

Query: 199 YMDIKRPLSLQ-LEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQ 258
             D +  L L+ L + + ++++   L+TG  KDVHGQL ++   V     + +N+ + +Q
Sbjct: 192 SGDEENELVLRSLSHQSHLILQAEGLSTGFCKDVHGQLKIIRGAVSS-GKRGKNQPEIYQ 251

Query: 259 FYIKENGTEFFYSGSRA 261
           + I++    FF  G  A
Sbjct: 252 YKIQDKHVAFFARGLSA 262

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy Swiss-Prot
Match: Q8BK75 (Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.7e-17
Identity = 73/249 (29.32%), Postives = 123/249 (49.40%), Query Frame = 0


Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAVIFLAFSQSFVHYDRILRKLGCNLAA 85
           G L L+ D  +T G+F++HH L        ++  V F+A  QSF HY+ + +KLG +L A
Sbjct: 19  GTLTLLCD-AKTDGSFLVHHFLSFYL---KANCKVCFVALVQSFSHYNIVGQKLGVSLTA 78

Query: 86  QRDNGRFVFFDMLTLGCSD-----------RSGKETDEGVLVGLYCKIQRAVDALIQENK 145
            RD G+ VF + L                 +  +E   G L  LY  IQ  +     E  
Sbjct: 79  ARDRGQLVFLEGLKSSVEVLFHSQDEPHPLQFLREAGTGNLQSLYTFIQDTLKPADSEES 138

Query: 146 --KHVTIVIDDISLLEVAANGSSNLVLDFLHYCH-TLLSEVGCSIIALDH--EDVYMDIK 205
             K+  +++D++S+L ++    +  VLDF+ YC  T+  E+  +++AL H  E    +  
Sbjct: 139 PWKYPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGNVVALVHDTEGATDEGN 198

Query: 206 RPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVL-NKPVEGLQDKLRNRVQNFQFYIKE 258
             L   L + + ++++   LATG  KDVHGQL++L  +P      + ++    +Q+ I++
Sbjct: 199 DTLLNGLSHQSHLILRAEGLATGFCKDVHGQLSILWRRPSRSTAQRAQS--LTYQYKIQD 258

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy Swiss-Prot
Match: Q28CX0 (Elongator complex protein 6 OS=Xenopus tropicalis OX=8364 GN=elp6 PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16
Identity = 67/250 (26.80%), Postives = 121/250 (48.40%), Query Frame = 0


Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAVIFLAFSQSFVHYDRILRKLGCNLAA 85
           G+  L+ D  +T G+F++HH L        +   V F+A  QSF HY  + +KLG NL++
Sbjct: 19  GKFTLLCDS-KTDGSFLVHHFLSYYL---RAGCRVCFVALVQSFSHYSIVAQKLGVNLSS 78

Query: 86  QRDNGRFVFFDMLTLGCSDRSGKETDEGV------------LVGLYCKIQRAVDALIQEN 145
            +D G+ VF + L        G   +  V            L  LY  +  A+     ++
Sbjct: 79  AKDEGQLVFLEGLRSYTDLLFGDNPEAEVTNPLCFLRAGSDLKPLYSFVSAALAPSAGQS 138

Query: 146 KKHVTIVIDDISLLEVAANGSSNLVLDFLHYCH-TLLSEVGCSIIALDH--EDVYMDIKR 205
            K   +++DD+S+L ++       +LDF+HYC  T+ ++   +++ L H  E+   + K 
Sbjct: 139 WKCPVLILDDVSVL-LSLGVPPLQLLDFMHYCRATVCTQYQGNVVCLVHGAEESGDEEKE 198

Query: 206 PLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENG 261
            L   L + + V++    L++G  K+VHGQL +    V   + + + + + +Q+ I++  
Sbjct: 199 LLRRSLSHQSQVILWAEGLSSGFCKEVHGQLKIFRGAVSSGKKRGQTQPEIYQYKIQDKH 258

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy Swiss-Prot
Match: B2RYG8 (Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.7e-16
Identity = 77/252 (30.56%), Postives = 124/252 (49.21%), Query Frame = 0


Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAVIFLAFSQSFVHYDRILRKLGCNLAA 85
           G+L L+ D  +T G+F++HH L        ++  V F+A  QSF HY+ + +KLG +L A
Sbjct: 19  GKLTLLCD-AKTDGSFLVHHFLSFYL---KANCKVCFVALVQSFSHYNIVGQKLGVSLTA 78

Query: 86  QRDNGRFVFFDML-----TLGCSDRSG------KETDEGVLVGLYCKIQRAVDALIQENK 145
            R+ G+ VF + L      L  S          +E   G L  LY  IQ  +        
Sbjct: 79  ARERGQLVFLEGLKSSVEVLFHSQEEPHPLQFLREAGAGNLQSLYTFIQDTLKPADSGES 138

Query: 146 --KHVTIVIDDISLLEVAANGSSNLVLDFLHYCH-TLLSEVGCSIIALDH--EDVYMDIK 205
             K   +++D++S+L ++    +  VLDF+ YC  T+  E+  +++AL H  E    +  
Sbjct: 139 PWKCPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGNVVALVHDTEGAEDEEN 198

Query: 206 RPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKEN 261
             L   L + + ++++   LATG  KDVHGQL++L +         R R   +Q+ I++ 
Sbjct: 199 NILLNGLSHQSHLILRTQGLATGFCKDVHGQLSILWRR-SSQPTAQRARSLTYQYKIQDK 258

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SX52 (Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00250 PE=3 SV=1)

HSP 1 Score: 514 bits (1325), Expect = 3.30e-184
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV
Sbjct: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC
Sbjct: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSII+LD
Sbjct: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIISLD 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ
Sbjct: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSRA
Sbjct: 241 NFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BDL6 (elongator complex protein 6 OS=Cucumis melo OX=3656 GN=LOC103488736 PE=3 SV=1)

HSP 1 Score: 514 bits (1325), Expect = 3.30e-184
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV
Sbjct: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC
Sbjct: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSII+LD
Sbjct: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIISLD 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ
Sbjct: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSRA
Sbjct: 241 NFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KLF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 4.64e-172
Identity = 247/260 (95.00%), Postives = 251/260 (96.54%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           MDRM SNLLD AIGFDDPT   PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSP+SSN V
Sbjct: 1   MDRMTSNLLDEAIGFDDPT---PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IFLAFSQSF+HYDRILRKLGCNLAAQRD+GRFVFFDMLTLGCSDRSGKET EGVLVGLYC
Sbjct: 61  IFLAFSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAV ALIQENKKHVTIVIDDISLLEVAANGSSN VLDFLHYCHTLLSEVGCSIIALD
Sbjct: 121 KIQRAVHALIQENKKHVTIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALD 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVYMDI+RPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ
Sbjct: 181 HEDVYMDIERPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSRA
Sbjct: 241 NFQFYIKENGTEFFYSGSRA 257

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CBS2 (elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 1.46e-162
Identity = 226/260 (86.92%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           MDRMASN+LD A+G DDP  PSPLIGRLLLVEDCVETSGAF+LHHLLKR+ SSP SSNAV
Sbjct: 1   MDRMASNMLDEALGLDDPAKPSPLIGRLLLVEDCVETSGAFLLHHLLKRSLSSPQSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IF+AFSQ F HYDR+LRKLGCNL AQRD+GRF+FFDMLTLGCSDRSGKETDEGVLVGLYC
Sbjct: 61  IFIAFSQXFAHYDRVLRKLGCNLVAQRDSGRFIFFDMLTLGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAV+ALIQ+NKKHVTIVIDDI LLEVAANGSSN VLDFLHYCHTL SE+GCS+IAL+
Sbjct: 121 KIQRAVNALIQQNKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSLIALN 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVYMD +RP  LQ+EYLADVLIKVGPLATGIAKDVHGQLTVLNKPV GLQD LRNRV+
Sbjct: 181 HEDVYMDTERPRILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQDNLRNRVR 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSR 
Sbjct: 241 NFQFYIKENGTEFFYSGSRT 260

[Close]

BLAST of MELO3C011718.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GYT6 (elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458756 PE=3 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 6.91e-161
Identity = 227/260 (87.31%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60
           M RM SNLLD AIG DD TN SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSP+SSNAV
Sbjct: 1   MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120
           IF+AFSQSFVHYDR+LRKLGCNLAAQRD+ RF F DMLT+GCSDRSGKETDEGVLVGLYC
Sbjct: 61  IFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIIALD 180
           KIQRAV ALIQENK+HVTI+IDDI LLEVAANGSSN VLDFLHYCHTL SE+GCSIIAL 
Sbjct: 121 KIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180

Query: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240
           HEDVY+DI+RPL LQ+EYLA++LIKVGPLATGIAKDVHGQLTVLNKPV GLQ+ LRNRV 
Sbjct: 181 HEDVYLDIERPLILQMEYLAEILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVH 240

Query: 241 NFQFYIKENGTEFFYSGSRA 260
           NFQFYIKENGTEFFYSGSRA
Sbjct: 241 NFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of MELO3C011718.jh1 vs. TAIR 10
Match: AT4G10090.1 (elongator protein 6 )

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-75
Identity = 148/264 (56.06%), Postives = 192/264 (72.73%), Query Frame = 0


Query: 1   MDRMASNLLDGAIGFDDP-TNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNA 60
           MDR + NLLD A+GFD+    PSPL G+++L+EDCVETSG+FVLH L+KR  SS NSS+A
Sbjct: 1   MDR-SLNLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSDA 60

Query: 61  VIFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           +IFLAF++ F HYDRILRKLGCNLA  + N R VFFDML + CSD    E +   +  L+
Sbjct: 61  LIFLAFARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKLF 120

Query: 121 CKIQRAVDALIQENKKHVTIVIDDISLLEVAANGS-SNLVLDFLHYCHTLLSEVGCSIIA 180
            +IQ  V  L      ++T+++DD+SLLE+A  GS S+ VLDFLHYCHTL SE  CS++ 
Sbjct: 121 REIQETVRKLQSVTSGNITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLVI 180

Query: 181 LDHEDVYMDIKRP-LSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGL-QDKLR 240
           L+HED+Y  ++RP   LQ+  LADV+IK  PLA+G+A DVHGQLTVLNK +    +   R
Sbjct: 181 LNHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSSR 240

Query: 241 NRVQNFQFYIKENGTEFFYSGSRA 261
           N++QNFQF IKENG ++FY G R+
Sbjct: 241 NKLQNFQFRIKENGIDYFYPGCRS 262

The following BLAST results are available for this feature:

BLAST of MELO3C011718.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445832.1	6.81e-184	99.62	PREDICTED: elongator complex protein 6 [Cucumis melo] >KAA0034041.1 elongator co...	[more]
XP_011654922.1	9.58e-172	95.00	elongator complex protein 6 [Cucumis sativus] >KGN50480.1 hypothetical protein C...	[more]
XP_038893352.1	3.28e-166	89.23	elongator complex protein 6 [Benincasa hispida]	[more]
XP_022139240.1	3.01e-162	86.92	elongator complex protein 6 [Momordica charantia]	[more]
XP_022957322.1	1.43e-160	87.31	elongator complex protein 6 isoform X1 [Cucurbita moschata]	[more]

BLAST of MELO3C011718.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9Y2	1.6e-74	56.06	Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1	[more]
Q0IHA2	7.9e-18	28.79	Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1	[more]
Q8BK75	6.7e-17	29.32	Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1	[more]
Q28CX0	1.1e-16	26.80	Elongator complex protein 6 OS=Xenopus tropicalis OX=8364 GN=elp6 PE=2 SV=2	[more]
B2RYG8	5.7e-16	30.56	Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1	[more]

BLAST of MELO3C011718.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SX52	3.30e-184	99.62	Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3BDL6	3.30e-184	99.62	elongator complex protein 6 OS=Cucumis melo OX=3656 GN=LOC103488736 PE=3 SV=1	[more]
A0A0A0KLF1	4.64e-172	95.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1	[more]
A0A6J1CBS2	1.46e-162	86.92	elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 ...	[more]
A0A6J1GYT6	6.91e-161	87.31	elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of MELO3C011718.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10090.1	1.1e-75	56.06	elongator protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018627	Elongator complex protein 6	PFAM	PF09807	ELP6	coord: 23..247 e-value: 2.7E-31 score: 108.9
IPR018627	Elongator complex protein 6	PANTHER	PTHR16184	ELONGATOR COMPLEX PROTEIN 6	coord: 2..259
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 19..256 e-value: 1.5E-33 score: 118.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011718.jh1.t1	MELO3C011718.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0033588	elongator holoenzyme complex