MELO3C011709.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C011709.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionserine/arginine-rich splicing factor RS2Z32-like isoform X2
Locationchr10: 5628471 .. 5631190 (-)
RNA-Seq ExpressionMELO3C011709.jh1
SyntenyMELO3C011709.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTGCGAAAGACGTAAAATTTAGGGTTTCGCATCCTTATTGTTTCCAGGTGCGCTTCGCCTCCTCCTGCGATTTTTCTAGGTCTTCTCTTCTCGAATCCTCCCACTCCATATTCATAGCATTTTTCTATTCAAATTTTTGCTCAATCACATTCCTGTACGTTCTCTATTTTGCTTATTAATTGGGTTTTCCTCTTCGATTTGTCAAATTGTTGAATTGTGTATATTTTCACTTGTTTCAACGTATTTTTGATTTGAATACTTGCTCAAGTAATTGGTTTTTGAATTCTGTCGCTGACTGTAGTGCTGTGGTTGATTTTTTTAGATAAAATGCCTCGCTATGACGATCGTTACGGCGGTACTCGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGGTATGCCTATTTTTGCCGGGTGCAATCCGATATCGGTCGAATTTGTGTGGCAAAAGTAATTTTATGAATACGGAAAATTTGTGTGTGTTTAGTTGTGTCTTTTTCTTTGCTTCTATTGGCCGGTTTTGCTATTGCTAACATCCTTGTCAGAGTAAATTTTTAATTGATACTTCTCTCGAGACCTCTTGAGGTATTTGCCAAGCCCTTTTTTGGGTGCACGACTGTGAATGTGTATTTTGATATATCCATGAAAGTGTGGAATTGTTGATGGGTCTGTGTGGTTTAACTTGAGTGATCTTGTTGAAGGTTTCTTGGCTTATGCCAAACCTGGAGGTCTATGGTGAGAGGGTTCCCTTGGTGGATTTGGCGAGTCTTTCTATTATGTTATTGCCTGTTTTTATGGAAATGCCAAGAATCTCAGAATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGGTACTTGTATCAAATGATGGCCTTACCTGTTTCTGGAACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGTATGTATTTCTCTCCCTATACTTCTTTCATTTTTATTTAAGCTATTTTTGGAAGATAAAATGATATATGCTAGGATCCTTTCTCTATACTTAATGGCGCATGTTAATTTTGCAAGTGTGATCTTTTTCTTGGTCTATTTGCTTAAACATCTGATATCAGGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTGAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTATGTTCCATTATCTTTCCTGACAAACCTTTCATGAACTTTTTAATTTCTTTCAGACAAGTTACCTCTGTTTTTTCCAGGCTAGTCATCATTTTTATCTTTTTAAGTGGTTAACTGTTTCATATTTATGGTGGATTGATAACTGTTTTGTGATTTTGAATTATTATTTTGGTTTGTGGAACTTGGAAGATATCCTTCACGTTCTTTTGCAATTGTGCTCTTTTCATAGTCTCATTTGTTCATTTTTATAAAGGCTATGTGTAGTTTTCCTGGCTTGTGCAGGTAAGTTAAAGCTTGTTTATATCTTGTACATTAATTTTGTGAACTATTTTATTTCTTTTGAATGTAATGAAAATTTCCAATATTGATTTAGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCGAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAGTTGAAGTATATTATCTTTTCAAATTTTCTTTCCCTTCCCTTTTTAATTTTTCCCTGTTGATCATTCTGAATAAAGAAATTGTATGGCACAGGCGTGGAAGTTACTCACGTTCACCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTATAGCAGAGGTCGAAGCTACAGGTTTGTTTCAATTGAACCATCTCCCTCTAGTCTGGTATTGAAGTTTTCCTCTTCCTTCATAGCCTTCATGAGCAACAATTAATTATTTTACTTGAGGCTTTATTACTTCCTGATTGAGCAATTCGTGTATTGTGTCCTCAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCAAGAGGAAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGAAGTCCAGAAGAAGATGCAAGACGCAGTCTGTCCCCAGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAACGGTGGTGGAAGTAGAAATTATCGAAGGGAAGAAAACGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGTGAATCTGCATAATAGAGAGTTCCTTATTTTGCTTCTGCTTAAACACATGCGTTTGCGTTGGAATTTTATAAGACAGACTTAAATAGTGTATTGTGATTGAATCCCTCCTCAAATGTTCATCAGCACCGTATTTTTCCTATTTATAATTCCAGCTAAATTATGATAAATTATATATAATAATCTGTTTCTTATTA

mRNA sequence

ATTTTTGCGAAAGACGTAAAATTTAGGGTTTCGCATCCTTATTGTTTCCAGGTGCGCTTCGCCTCCTCCTGCGATTTTTCTAGATAAAATGCCTCGCTATGACGATCGTTACGGCGGTACTCGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGGTATGCCTATTTTTGCCGGGTGCAATCCGATATCGGTCGAATTTGTGTGGCAAAAGTAATTTTATGAATACGGAAAATTTGTGTGTGTTTAGTTGTGTCTTTTTCTTTGCTTCTATTGGCCGGTTTTGCTATTGCTAACATCCTTGTCAGAGTAAATTTTTAATTGATACTTCTCTCGAGACCTCTTGAGGTATTTGCCAAGCCCTTTTTTGGGTGCACGACTGTGAATGTGTATTTTGATATATCCATGAAAGTGTGGAATTGTTGATGGGTCTGTGTGGTTTAACTTGAGTGATCTTGTTGAAGGTTTCTTGGCTTATGCCAAACCTGGAGGTCTATGGTGAGAGGGTTCCCTTGGTGGATTTGGCGAGTCTTTCTATTATGTTATTGCCTGTTTTTATGGAAATGCCAAGAATCTCAGAATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGGTACTTGTATCAAATGATGGCCTTACCTGTTTCTGGAACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTGAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCGAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAGTTGAAGCGTGGAAGTTACTCACGTTCACCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTATAGCAGAGGTCGAAGCTACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCAAGAGGAAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGAAGTCCAGAAGAAGATGCAAGACGCAGTCTGTCCCCAGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAACGGTGGTGGAAGTAGAAATTATCGAAGGGAAGAAAACGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGTGAATCTGCATAATAGAGAGTTCCTTATTTTGCTTCTGCTTAAACACATGCGTTTGCGTTGGAATTTTATAAGACAGACTTAAATAGTGTATTGTGATTGAATCCCTCCTCAAATGTTCATCAGCACCGTATTTTTCCTATTTATAATTCCAGCTAAATTATGATAAATTATATATAATAATCTGTTTCTTATTA

Coding sequence (CDS)

ATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGGTACTTGTATCAAATGATGGCCTTACCTGTTTCTGGAACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTGAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCGAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAGTTGAAGCGTGGAAGTTACTCACGTTCACCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTATAGCAGAGGTCGAAGCTACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCAAGAGGAAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGAAGTCCAGAAGAAGATGCAAGACGCAGTCTGTCCCCAGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAACGGTGGTGGAAGTAGAAATTATCGAAGGGAAGAAAACGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGTGAATCTGCATAA

Protein sequence

MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA
Homology
[Close]
BLAST of MELO3C011709.jh1 vs. NCBI nr
Match: XP_008445810.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform X3 [Cucumis melo] >XP_008445811.1 PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform X3 [Cucumis melo])

HSP 1 Score: 585 bits (1509), Expect = 1.98e-210
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0 

Query: 1   MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL 60
           MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL
Sbjct: 1   MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL 60

Query: 61  NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK 120
           NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK
Sbjct: 61  NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK 120

Query: 121 CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS 180
           CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS
Sbjct: 121 CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS 180

Query: 181 LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG 240
           LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG
Sbjct: 181 LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG 240

Query: 241 RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG 300
           RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG
Sbjct: 241 RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG 300

Query: 301 GSESA 305
           GSESA
Sbjct: 301 GSESA 305

[Close]
BLAST of MELO3C011709.jh1 vs. NCBI nr
Match: XP_011654931.1 (serine/arginine-rich splicing factor RS2Z33 isoform X3 [Cucumis sativus] >XP_011654932.1 serine/arginine-rich splicing factor RS2Z33 isoform X3 [Cucumis sativus])

HSP 1 Score: 584 bits (1505), Expect = 8.07e-210
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0 

Query: 1   MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL 60
           MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL
Sbjct: 1   MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL 60

Query: 61  NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK 120
           NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK
Sbjct: 61  NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK 120

Query: 121 CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS 180
           CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS
Sbjct: 121 CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS 180

Query: 181 LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG 240
           LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG
Sbjct: 181 LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG 240

Query: 241 RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG 300
           RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG
Sbjct: 241 RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG 300

Query: 301 GSES 304
           GSES
Sbjct: 301 GSES 304

[Close]
BLAST of MELO3C011709.jh1 vs. NCBI nr
Match: XP_008445803.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo] >XP_008445804.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo] >XP_008445805.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo])

HSP 1 Score: 580 bits (1496), Expect = 6.20e-208
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0 

Query: 4   SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 63
           SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR
Sbjct: 36  SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 95

Query: 64  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 123
           DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR
Sbjct: 96  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 155

Query: 124 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 183
           CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER
Sbjct: 156 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 215

Query: 184 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 243
           SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR
Sbjct: 216 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 275

Query: 244 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 303
           SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE
Sbjct: 276 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 335

Query: 304 SA 305
           SA
Sbjct: 336 SA 337

[Close]
BLAST of MELO3C011709.jh1 vs. NCBI nr
Match: KAA0034024.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 580 bits (1496), Expect = 1.16e-207
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0 

Query: 4   SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 63
           SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR
Sbjct: 53  SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 112

Query: 64  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 123
           DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR
Sbjct: 113 DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 172

Query: 124 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 183
           CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER
Sbjct: 173 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 232

Query: 184 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 243
           SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR
Sbjct: 233 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 292

Query: 244 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 303
           SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE
Sbjct: 293 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 352

Query: 304 SA 305
           SA
Sbjct: 353 SA 354

[Close]
BLAST of MELO3C011709.jh1 vs. NCBI nr
Match: XP_011654929.1 (serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_011654930.1 serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_031741873.1 serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus])

HSP 1 Score: 579 bits (1492), Expect = 2.52e-207
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 4   SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 63
           SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR
Sbjct: 36  SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 95

Query: 64  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 123
           DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR
Sbjct: 96  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 155

Query: 124 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 183
           CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER
Sbjct: 156 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 215

Query: 184 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 243
           SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR
Sbjct: 216 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 275

Query: 244 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 303
           SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE
Sbjct: 276 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 335

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy Swiss-Prot
Match: Q8VYA5 (Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.8e-60
Identity = 162/289 (56.06%), Postives = 188/289 (65.05%), Query Frame = 0 

Query: 32  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 91
           RVRDVDMKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  R
Sbjct: 36  RVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSR 95

Query: 92  G-PPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRS 151
           G PPG GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRS
Sbjct: 96  GPPPGAGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRS 155

Query: 152 P----SPRRGRSRSRSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSP 211
           P    SPRR RS SRS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S 
Sbjct: 156 PVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSL 215

Query: 212 PPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGS 271
            P+A  RSP  D                 D  SP+    SP    +   + G D +GG  
Sbjct: 216 SPRARDRSPVLD-----------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP 275

Query: 272 RNYRREENGYSRSPSPL-------PREERSPVND--EDNNGSPRGGSES 305
                ++NG +   SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 276 -----QDNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 289

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy Swiss-Prot
Match: Q9FYB7 (Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-59
Identity = 151/244 (61.89%), Postives = 173/244 (70.90%), Query Frame = 0 

Query: 32  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 91
           RVRDVDMKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   R
Sbjct: 36  RVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSR 95

Query: 92  G-PPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYS 151
           G PPG+GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP   K  + GSYS
Sbjct: 96  GPPPGSGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYS 155

Query: 152 RSP----SPRRGR--SRSRSYSRGRSYSRSRSPVKRDRSLE---RSDK---RSRSPRGRS 211
           RSP    SPRR R  SRSRSYSRGRSYSRSRSPV+R++S+E   RS K   RS SP+GR 
Sbjct: 156 RSPVKSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD 215

Query: 212 SPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRS 256
                SLSP  K +  SP   +R  + D     +   R+S SP  G   SP    G+ RS
Sbjct: 216 ----QSLSPDRKVIDASP---KRGSDYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRS 269

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy Swiss-Prot
Match: Q3T106 (Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-15
Identity = 79/196 (40.31%), Postives = 97/196 (49.49%), Query Frame = 0 

Query: 42  YAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFN 101
           +AFVEF DPRDA+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ 
Sbjct: 49  FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYE 108

Query: 102 CGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRS 161
           CG  GH+A DC     + +  R   R H     +  +  +   RG  SRS SPRR RS S
Sbjct: 109 CGEKGHYAYDCHRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVS 168

Query: 162 RSYSRGRSYSRSRS-PVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDER 221
              SR  S  RSRS  +K  RS  RS  RSRS     S +  S SP PK          R
Sbjct: 169 LRRSRSASLRRSRSGSIKGSRSRSRSRSRSRSLSRPRSSRSKSRSPSPKR--------SR 228

Query: 222 SPEEDARRSLSPGNRD 235
           SP    RRS SP   D
Sbjct: 229 SPSGSPRRSASPERVD 235

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy Swiss-Prot
Match: Q16629 (Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.8e-14
Identity = 77/196 (39.29%), Postives = 99/196 (50.51%), Query Frame = 0 

Query: 42  YAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFN 101
           +AFVEF DPRDA+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ 
Sbjct: 49  FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYE 108

Query: 102 CGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRS 161
           CG  GH+A DC     + +  R   R H     +  +  +   RG  SRS SPRR RS S
Sbjct: 109 CGEKGHYAYDCHRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSIS 168

Query: 162 RSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPD-ER 221
              SR  S  RSRS   +     +S  RSRS R RS  +  S     ++  RSP+P   R
Sbjct: 169 LRRSRSASLRRSRSGSIKGSRYFQSPSRSRS-RSRSISRPRS----SRSKSRSPSPKRSR 228

Query: 222 SPEEDARRSLSPGNRD 235
           SP    RRS SP   D
Sbjct: 229 SPSGSPRRSASPERMD 238

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy Swiss-Prot
Match: Q8BL97 (Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.0e-13
Identity = 76/196 (38.78%), Postives = 97/196 (49.49%), Query Frame = 0 

Query: 42  YAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFN 101
           +AFVEF DPRDA+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ 
Sbjct: 78  FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYE 137

Query: 102 CGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRS 161
           CG  GH+A DC     + +  R   R H     +  +  +   RG  SRS SPRR RS S
Sbjct: 138 CGEKGHYAYDCHRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVS 197

Query: 162 RSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPD-ER 221
              SR  S  RSRS         +S  RSRS R RS  +  S     ++  RSP+P   R
Sbjct: 198 LRRSRSASLRRSRSGSIIGSRYFQSRSRSRS-RSRSISRPRS----SRSKSRSPSPKRSR 257

Query: 222 SPEEDARRSLSPGNRD 235
           SP     RS SP   D
Sbjct: 258 SPSGSPHRSASPERMD 267

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BEE4 (serine/arginine-rich splicing factor RS2Z33-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 585 bits (1509), Expect = 9.59e-211
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0 

Query: 1   MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL 60
           MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL
Sbjct: 1   MVFSSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSL 60

Query: 61  NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK 120
           NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK
Sbjct: 61  NGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNK 120

Query: 121 CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS 180
           CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS
Sbjct: 121 CYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRS 180

Query: 181 LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG 240
           LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG
Sbjct: 181 LERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRG 240

Query: 241 RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG 300
           RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG
Sbjct: 241 RSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRG 300

Query: 301 GSESA 305
           GSESA
Sbjct: 301 GSESA 305

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BD24 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 3.00e-208
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0 

Query: 4   SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 63
           SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR
Sbjct: 36  SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 95

Query: 64  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 123
           DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR
Sbjct: 96  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 155

Query: 124 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 183
           CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER
Sbjct: 156 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 215

Query: 184 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 243
           SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR
Sbjct: 216 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 275

Query: 244 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 303
           SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE
Sbjct: 276 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 335

Query: 304 SA 305
           SA
Sbjct: 336 SA 337

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SS39 (Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00080 PE=4 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 5.62e-208
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0 

Query: 4   SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 63
           SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR
Sbjct: 53  SSSMRGEVSTLWYLYQMMALPVSGTNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGR 112

Query: 64  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 123
           DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR
Sbjct: 113 DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 172

Query: 124 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 183
           CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER
Sbjct: 173 CGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER 232

Query: 184 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 243
           SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR
Sbjct: 233 SDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSR 292

Query: 244 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 303
           SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE
Sbjct: 293 SPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSE 352

Query: 304 SA 305
           SA
Sbjct: 353 SA 354

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BDJ7 (serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 525 bits (1353), Expect = 6.59e-187
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 

Query: 32  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 91
           RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR
Sbjct: 36  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 95

Query: 92  GPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPS 151
           GPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPS
Sbjct: 96  GPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPS 155

Query: 152 PRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKR 211
           PRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKR
Sbjct: 156 PRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKR 215

Query: 212 SPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREE 271
           SPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREE
Sbjct: 216 SPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREE 275

Query: 272 NGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA 305
           NGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA
Sbjct: 276 NGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA 309

[Close]
BLAST of MELO3C011709.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KS31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1)

HSP 1 Score: 524 bits (1349), Expect = 2.55e-185
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0 

Query: 32  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 91
           RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR
Sbjct: 98  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 157

Query: 92  GPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPS 151
           GPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPS
Sbjct: 158 GPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPS 217

Query: 152 PRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKR 211
           PRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKR
Sbjct: 218 PRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKR 277

Query: 212 SPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREE 271
           SPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREE
Sbjct: 278 SPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREE 337

Query: 272 NGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 304
           NGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 338 NGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 370

[Close]
BLAST of MELO3C011709.jh1 vs. TAIR 10
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 232.6 bits (592), Expect = 4.1e-61
Identity = 162/289 (56.06%), Postives = 188/289 (65.05%), Query Frame = 0 

Query: 32  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 91
           RVRDVDMKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  R
Sbjct: 36  RVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSR 95

Query: 92  G-PPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRS 151
           G PPG GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRS
Sbjct: 96  GPPPGAGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRS 155

Query: 152 P----SPRRGRSRSRSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSP 211
           P    SPRR RS SRS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S 
Sbjct: 156 PVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSL 215

Query: 212 PPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGS 271
            P+A  RSP  D                 D  SP+    SP    +   + G D +GG  
Sbjct: 216 SPRARDRSPVLD-----------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP 275

Query: 272 RNYRREENGYSRSPSPL-------PREERSPVND--EDNNGSPRGGSES 305
                ++NG +   SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 276 -----QDNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 289

[Close]
BLAST of MELO3C011709.jh1 vs. TAIR 10
Match: AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-60
Identity = 151/244 (61.89%), Postives = 173/244 (70.90%), Query Frame = 0 

Query: 32  RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGR 91
           RVRDVDMKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   R
Sbjct: 36  RVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSR 95

Query: 92  G-PPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYS 151
           G PPG+GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP   K  + GSYS
Sbjct: 96  GPPPGSGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYS 155

Query: 152 RSP----SPRRGR--SRSRSYSRGRSYSRSRSPVKRDRSLE---RSDK---RSRSPRGRS 211
           RSP    SPRR R  SRSRSYSRGRSYSRSRSPV+R++S+E   RS K   RS SP+GR 
Sbjct: 156 RSPVKSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD 215

Query: 212 SPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRS 256
                SLSP  K +  SP   +R  + D     +   R+S SP  G   SP    G+ RS
Sbjct: 216 ----QSLSPDRKVIDASP---KRGSDYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRS 269

[Close]
BLAST of MELO3C011709.jh1 vs. TAIR 10
Match: AT2G37340.3 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-57
Identity = 156/283 (55.12%), Postives = 182/283 (64.31%), Query Frame = 0 

Query: 38  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 97
           MKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG 
Sbjct: 1   MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGA 60

Query: 98  GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----S 157
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    S
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRS 120

Query: 158 PRRGRSRSRSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMK 217
           PRR RS SRS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S  P+A  
Sbjct: 121 PRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARD 180

Query: 218 RSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRRE 277
           RSP  D                 D  SP+    SP    +   + G D +GG       +
Sbjct: 181 RSPVLD-----------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----Q 240

Query: 278 ENGYSRSPSPL-------PREERSPVND--EDNNGSPRGGSES 305
           +NG +   SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 241 DNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 248

[Close]
BLAST of MELO3C011709.jh1 vs. TAIR 10
Match: AT3G53500.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 219.5 bits (558), Expect = 3.6e-57
Identity = 145/238 (60.92%), Postives = 167/238 (70.17%), Query Frame = 0 

Query: 38  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 97
           MKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+
Sbjct: 1   MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGS 60

Query: 98  GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP--- 157
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP   
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKS 120

Query: 158 -SPRRGR--SRSRSYSRGRSYSRSRSPVKRDRSLE---RSDK---RSRSPRGRSSPKRHS 217
            SPRR R  SRSRSYSRGRSYSRSRSPV+R++S+E   RS K   RS SP+GR      S
Sbjct: 121 RSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD----QS 180

Query: 218 LSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRSPMDE 256
           LSP  K +  SP   +R  + D     +   R+S SP  G   SP    G+ RSP+D+
Sbjct: 181 LSPDRKVIDASP---KRGSDYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDD 228

[Close]
BLAST of MELO3C011709.jh1 vs. TAIR 10
Match: AT2G37340.2 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52
Identity = 148/275 (53.82%), Postives = 174/275 (63.27%), Query Frame = 0 

Query: 46  EFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGI 105
           EF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+
Sbjct: 20  EFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGV 79

Query: 106 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRS 165
           DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS S
Sbjct: 80  DGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPS 139

Query: 166 RSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDER 225
           RS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S  P+A  RSP  D  
Sbjct: 140 RSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARDRSPVLD-- 199

Query: 226 SPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSP 285
                          D  SP+    SP    +   + G D +GG       ++NG +   
Sbjct: 200 ---------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVV 259

Query: 286 SPL-------PREERSPVND--EDNNGSPRGGSES 305
           SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 260 SPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 259

The following BLAST results are available for this feature:
BLAST of MELO3C011709.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445810.11.98e-210100.00PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform X3 [Cucumis ... [more]
XP_011654931.18.07e-210100.00serine/arginine-rich splicing factor RS2Z33 isoform X3 [Cucumis sativus] >XP_011... [more]
XP_008445803.16.20e-208100.00PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis ... [more]
KAA0034024.11.16e-207100.00serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. m... [more]
XP_011654929.12.52e-207100.00serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_011... [more]
BLAST of MELO3C011709.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VYA55.8e-6056.06Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q9FYB72.2e-5961.89Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q3T1061.9e-1540.31Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1[more]
Q166294.8e-1439.29Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=... [more]
Q8BL979.0e-1338.78Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV... [more]
BLAST of MELO3C011709.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BEE49.59e-211100.00serine/arginine-rich splicing factor RS2Z33-like isoform X3 OS=Cucumis melo OX=3... [more]
A0A1S3BD243.00e-208100.00serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3... [more]
A0A5A7SS395.62e-208100.00Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var.... [more]
A0A1S3BDJ76.59e-187100.00serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3... [more]
A0A0A0KS312.55e-185100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1[more]
BLAST of MELO3C011709.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37340.14.1e-6156.06arginine/serine-rich zinc knuckle-containing protein 33 [more]
AT3G53500.21.6e-6061.89RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT2G37340.31.2e-5755.12arginine/serine-rich zinc knuckle-containing protein 33 [more]
AT3G53500.13.6e-5760.92RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT2G37340.21.2e-5253.82arginine/serine-rich zinc knuckle-containing protein 33 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 12..77
e-value: 2.0E-19
score: 80.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 13..74
e-value: 6.6E-15
score: 54.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 11..81
score: 17.216459
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 102..118
e-value: 2.9E-4
score: 30.1
coord: 124..140
e-value: 0.0022
score: 27.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 123..139
e-value: 1.8E-4
score: 21.4
coord: 102..117
e-value: 2.1E-6
score: 27.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 102..117
score: 10.147202
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 124..140
score: 10.575755
NoneNo IPR availableGENE3D4.10.60.10coord: 94..121
e-value: 1.6E-6
score: 29.6
coord: 122..162
e-value: 8.0E-6
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..309
NoneNo IPR availablePANTHERPTHR23147:SF152SERINE/ARGININE-RICH SPLICING FACTOR RS2Z33coord: 6..290
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 6..290
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..87
e-value: 1.5E-22
score: 81.6
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 95..141
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 9..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011709.jh1.t1MELO3C011709.jh1.t1mRNA
MELO3C011709.jh1.t2MELO3C011709.jh1.t2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding