MELO3C011698 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011698
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	MYB transcription factor
Location	chr03: 9684159 .. 9686058 (+)
RNA-Seq Expression	MELO3C011698
Synteny	MELO3C011698

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGGGTTGCAGGGGATGATGCGAAGTCCTGTCCTCGGGGACATTGGCGTCCAGCCGAGGATGAGAAGCTCCGACAGTTAGTCCAGCAGCACGGCCCGCAAAACTGGAATTTTATTGCAGAAAAACTACAAGGAAGATCAGGCATGTCTCTTTTTGTAATATCATTATTTGACACGTTTTTGTGGTTTTTCTTCCCTCTTTCCTATTGAAAAGAAAAAGGAAAAGATTTTTAATAAGTCTCTTGCTTATTTATTTAGTGTTTTTAAAGATCTTTCCCTTTCCTTTCTTTTTTTTTTTTTTTTTTAAAGTAGTTTTTGTGAAGTATCGGAGAATTGAATCTCTTTTAGAAGTACGTGACTTAAAAGTAGTTTTTACATGAGAAATGATTGTCTTAAAATTATTATATGATATATTAAGTAGTTTTTTGAATCCATACATCTTCCAAAAACTAAAAGAGTGCAATAACTGATGATGAAGTTTATATATTAGAAATGGAATATATCTATTGATTTTATTAACTCCGGACATCGAAAACATAAAATAAGAAATTAGAATTTTAATCTTTATTTGGTTTTGTGATTGTTTTCAGTTTTTTCTACTTAGAGTCCAACTCTTTAATTTACTTAAAATAGATTAGAATCGTGGTAAGAAACTAAATCTAATTTTTAAAATTAAAAAATTAAAAAATTGAATAGTAATTACCAAACGAAATCATAGTTTGTCAATGGAAGAATCCTCTTTACTGGGAGAAAGACAGCCAACTTTGCAAGCACTTCTCCTTGAGTGTTGTTAATTAAAGCTTTTCACTAACTATAATGCTTATTTCTATAGATTTGAACTGCCTTCTTATATATGTTTCTCATATAAGTCATCAAGTATTCTTTGTCGTCTCTAAAAAACTGAGAACTTTTGTTGATCATCATTTTTAAACTTAGTACATAATCACAAAAACTCAAGAAATGCATACTATTAAAAAAAAAAAAAATCACTATTATAAAATCGTCAAATGAAGATAAGAAAGAAAAAATGTGAAGAGCAGAGAGTAGTTAATACAAAGAGTTTACGTAATTTACTAACACTCTGTGCTAGCTATGTGCCAATTATATGTTCAGGATAGAGGGAGAGAGGAATAATTCAAATAACTCATATTAAAGCATGTCTCAACCATTCTAGAGTTTGTGTAGTGCATTTTCCTAAACCTTAAAGTCAGCTTACAAGTAACAAATTTAAGACATTTCAAAGAATTAAACCAAGAAATAGAAACGTCACTAAAACACAAAGATATGATCAAATATATGTTTTTTCTTTTTCTTTTCTTTTTTATGAAGTTGGATTAATAATTTTGATGATGCAGGGAAGAGTTGCAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCACAGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGGAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTATTTCCTGGAAGAACTGATAATGCTGTCAAGAACCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATAATAATCTCCCTACAAGGAAGAAAATTACAAGCAATTACCAACAATTTCTCCTTCATTCCAAATTGATCTCTCACTCACATGGTGACGGTCACGGGGGCGGGGAATTGTTCGGCAGATTCTGGCAGCCGAAAATTCGAAACCCTAACAACCGGTGGGATTATAACTTAAATATGTTCCTCAGATCATGTTATCAAAATTCATTCCGTTCAGAGAATTTTAGACTGAATATTCGATCAAAATCCACAATTAAGTTTGAGATTTTGAATGAATCTGTTGAGAGGAAGGATGCCAAGTTCATAGATTTTCTTGGGGTTGAGCAGTGA

mRNA sequence

ATGGCCGGGGTTGCAGGGGATGATGCGAAGTCCTGTCCTCGGGGACATTGGCGTCCAGCCGAGGATGAGAAGCTCCGACAGTTAGTCCAGCAGCACGGCCCGCAAAACTGGAATTTTATTGCAGAAAAACTACAAGGAAGATCAGGCATTTGCAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCACAGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGGAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTATTTCCTGGAAGAACTGATAATGCTGTCAAGAACCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATAATAATCTCCCTACAAGGAAGAAAATTACAAGCAATTACCAACAATTTCTCCTTCATTCCAAATTGATCTCTCACTCACATGGTGACGGTCACGGGGGCGGGGAATTGTTCGGCAGATTCTGGCAGCCGAAAATTCGAAACCCTAACAACCGGTGGGATTATAACTTAAATATGTTCCTCAGATCATGTTATCAAAATTCATTCCGTTCAGAGAATTTTAGACTGAATATTCGATCAAAATCCACAATTAAGTTTGAGATTTTGAATGAATCTGTTGAGAGGAAGGATGCCAAGTTCATAGATTTTCTTGGGGTTGAGCAGTGA

Coding sequence (CDS)

ATGGCCGGGGTTGCAGGGGATGATGCGAAGTCCTGTCCTCGGGGACATTGGCGTCCAGCCGAGGATGAGAAGCTCCGACAGTTAGTCCAGCAGCACGGCCCGCAAAACTGGAATTTTATTGCAGAAAAACTACAAGGAAGATCAGGCATTTGCAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCACAGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGGAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTATTTCCTGGAAGAACTGATAATGCTGTCAAGAACCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATAATAATCTCCCTACAAGGAAGAAAATTACAAGCAATTACCAACAATTTCTCCTTCATTCCAAATTGATCTCTCACTCACATGGTGACGGTCACGGGGGCGGGGAATTGTTCGGCAGATTCTGGCAGCCGAAAATTCGAAACCCTAACAACCGGTGGGATTATAACTTAAATATGTTCCTCAGATCATGTTATCAAAATTCATTCCGTTCAGAGAATTTTAGACTGAATATTCGATCAAAATCCACAATTAAGTTTGAGATTTTGAATGAATCTGTTGAGAGGAAGGATGCCAAGTTCATAGATTTTCTTGGGGTTGAGCAGTGA

Protein sequence

MAGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSGICRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLPTRKKITSNYQQFLLHSKLISHSHGDGHGGGELFGRFWQPKIRNPNNRWDYNLNMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ

Homology

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BLAST of MELO3C011698 vs. NCBI nr
Match: KAE8651846.1 (hypothetical protein Csa_006140 [Cucumis sativus])

HSP 1 Score: 445.3 bits (1144), Expect = 3.2e-121
Identity = 212/228 (92.98%), Postives = 219/228 (96.05%), Query Frame = 0


Query: 1   MAGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQL 60
           MAGVAGDD KSCPRGHWRPAEDEKLRQLVQQHGPQNWNF+AEKLQGRSG  CRLRWFNQL
Sbjct: 1   MAGVAGDDVKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFVAEKLQGRSGKSCRLRWFNQL 60

Query: 61  DPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 120
           DPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN
Sbjct: 61  DPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 120

Query: 121 NNNLPTRKKITSNYQQFLLHSKLISHSHGDGHGGGELFGRFWQPKIRNPNNRWDYNLNMF 180
           NNNL TRKKIT++YQQF+LHSKLISH HGD HG G LFGRFWQPK+RNPNNRWDYNLN+F
Sbjct: 121 NNNLSTRKKITNSYQQFVLHSKLISHPHGDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLF 180

Query: 181 LRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ 228
           LRSCYQNSFRSE+FR NIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
Sbjct: 181 LRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ 228

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BLAST of MELO3C011698 vs. NCBI nr
Match: XP_023535350.1 (transcription factor MYB105-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.3 bits (726), Expect = 9.5e-73
Identity = 159/240 (66.25%), Postives = 179/240 (74.58%), Query Frame = 0


Query: 2   AGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLD 61
           A  +GDD KSC RGHWRP EDEKLR+LV+Q+G QNWNFIAEKLQGRSG  CRLRWFNQLD
Sbjct: 8   ASTSGDDTKSCSRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRSGKSCRLRWFNQLD 67

Query: 62  PRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           PRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 
Sbjct: 68  PRINRRPFTEEEEERLLTAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNF 127

Query: 122 NNLPTRKKITSNYQQFLLHSK--------LISHSHGDGHGGGELFGRFWQPKIRNPNNRW 181
           +          N+ +F + SK          + +HG G GGG LF RFW+   +NPNN+W
Sbjct: 128 S------ATKLNFPEFFIGSKSSPTASAIARTRTHGGGCGGG-LFRRFWEH--QNPNNQW 187

Query: 182 DYNL------NMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFLGVE 227
           + +L      ++FLR  YQ+S    NF+ N RSKS I FEI NESVE+KD KFIDFLGVE
Sbjct: 188 NNSLFPHFPSSLFLR-WYQSSLDLRNFKDN-RSKS-INFEISNESVEKKDIKFIDFLGVE 235

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BLAST of MELO3C011698 vs. NCBI nr
Match: XP_022936691.1 (transcription factor MYB117-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-72
Identity = 158/240 (65.83%), Postives = 178/240 (74.17%), Query Frame = 0


Query: 2   AGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLD 61
           A  +GDD KSCPRGHWRP EDEKLR+LV+Q+G QNWNFIAEKLQGRSG  CRLRWFNQLD
Sbjct: 8   ASTSGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRSGKSCRLRWFNQLD 67

Query: 62  PRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           PRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 
Sbjct: 68  PRINRRPFTEEEEERLLTAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNF 127

Query: 122 NNLPTRKKITSNYQQFLLHSK--------LISHSHGDGHGGGELFGRFWQPKIRNPNNRW 181
           +          N+ +F + SK          + +HG G GGG LF RFW+   +NPNN+W
Sbjct: 128 S------ATKLNFPEFFIGSKSSLAASAIARTRTHGGGCGGG-LFRRFWER--QNPNNQW 187

Query: 182 D------YNLNMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFLGVE 227
           +      +  ++FLR  YQ+S    NF+ N RSKS I FEI NE VE+KD KFIDFLGVE
Sbjct: 188 NNSFFPHFPSSLFLR-WYQSSLDLRNFKEN-RSKS-INFEISNELVEKKDIKFIDFLGVE 235

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BLAST of MELO3C011698 vs. NCBI nr
Match: KAG6592163.1 (Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.6 bits (719), Expect = 6.1e-72
Identity = 157/240 (65.42%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 2   AGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLD 61
           A  +GDD KSCPRGHWRP EDEKLR+LV+Q+G QNWNFIAEKLQGRSG  CRLRWFNQLD
Sbjct: 8   ASTSGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRSGKSCRLRWFNQLD 67

Query: 62  PRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           PRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 
Sbjct: 68  PRINRRPFTEEEEERLLTAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNF 127

Query: 122 NNLPTRKKITSNYQQFLLHSK--------LISHSHGDGHGGGELFGRFWQPKIRNPNNRW 181
           +          N+ +F + SK          +  HG G GGG LF RFW+   +NPNN+W
Sbjct: 128 S------ATKLNFPEFFIGSKSSLTASTIARTRMHGGGCGGG-LFRRFWER--QNPNNQW 187

Query: 182 D------YNLNMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFLGVE 227
           +      +  ++FLR  YQ+S    NF+ N +SKS I FEI  ESVE+KD KFIDFLGVE
Sbjct: 188 NNSFFPHFPSSLFLR-WYQSSLDLRNFKEN-QSKS-INFEISKESVEKKDIKFIDFLGVE 235

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BLAST of MELO3C011698 vs. NCBI nr
Match: XP_022975017.1 (transcription factor CSA-like [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 9.8e-70
Identity = 156/244 (63.93%), Postives = 177/244 (72.54%), Query Frame = 0


Query: 2   AGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLD 61
           A   GDD KSCPRGHWRP EDEKLR+LV+Q+G QNWNFIAEKLQGRSG  CRLRWFNQLD
Sbjct: 8   ASTFGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRSGKSCRLRWFNQLD 67

Query: 62  PRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           PRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 
Sbjct: 68  PRINRRPFTEEEEERLLTAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNF 127

Query: 122 NNLPTRKKITSNYQQFLLHSK--------LISHSHGDGHG---GGELFGRFWQPKIRNPN 181
           +          N+ +  + SK          + +HG G G   GG LF RF   + +NPN
Sbjct: 128 S------ATKLNFHELFIGSKSSPTAPAIARTRTHGGGGGCGCGGGLFRRF--SERQNPN 187

Query: 182 NRWDYNL------NMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFL 228
           N+W+ +L      ++FLR  Y++S    N + N RSKS I FEI NESVE+KD KFIDFL
Sbjct: 188 NQWNNSLFPHFSSSVFLR-WYKSSLDLRNCKDN-RSKS-INFEISNESVEKKDVKFIDFL 240

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BLAST of MELO3C011698 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 7.6e-49
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 12  CPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFTE 71
           C RGHWRPAEDEKL+ LV+Q+GP NWN IA KL GRSG  CRLRWFNQLDPRINR PFTE
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 72  EEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLPTRKKIT 131
           EEEERLL AH IHGN+W++IARLFPGRTDNAVKNHWHVIMAR+ RQ S    LP+    T
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPS----T 123

Query: 132 SNYQQFLLHSKLISHSHGDGH 152
           ++    +   +++  S G  H
Sbjct: 124 TSSSSLMASEQIMMSSGGYNH 140

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BLAST of MELO3C011698 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48
Identity = 90/114 (78.95%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 6   GDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRIN 65
           G   K C RGHWRPAED KL+ LV Q+GPQNWN IAEKL GRSG  CRLRWFNQLDPRIN
Sbjct: 41  GVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRIN 100

Query: 66  RRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS 119
           RR FTEEEEERL+ AH  +GNKWALIARLFPGRTDNAVKNHWHV+MAR+ R+QS
Sbjct: 101 RRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQS 154

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BLAST of MELO3C011698 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 11  SCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFT 70
           S  RGHWRPAED KL++LV  +GPQNWN IAEKLQGRSG  CRLRWFNQLDPRINRR FT
Sbjct: 104 SVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFT 163

Query: 71  EEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           EEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHVIMARK R+QS++
Sbjct: 164 EEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSS 214

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BLAST of MELO3C011698 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 12  CPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFTE 71
           C RGHWRPAEDEKLR+LV+Q GP NWN IA+KL GRSG  CRLRWFNQLDPRINR PFTE
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 72  EEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS 119
           EEEERLL +H IHGN+W++IAR FPGRTDNAVKNHWHVIMAR+ R++S
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERS 110

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BLAST of MELO3C011698 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.2e-47
Identity = 89/128 (69.53%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 14  RGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFTEEE 73
           RGHWRPAED KL++LV  +GPQNWN IAEKLQGRSG  CRLRWFNQLDPRINRR FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 74  EERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN-------NNNLPT 133
           EERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHV+MARK R+ S+        +N P 
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPL 217

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BLAST of MELO3C011698 vs. ExPASy TrEMBL
Match: A0A0A0LKW9 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G229940 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.8e-92
Identity = 165/177 (93.22%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 51  CRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIM 110
           CRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIM
Sbjct: 63  CRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIM 122

Query: 111 ARKQRQQSNNNNLPTRKKITSNYQQFLLHSKLISHSHGDGHGGGELFGRFWQPKIRNPNN 170
           ARKQRQQSNNNNL TRKKIT++YQQF+LHSKLISH HGD HG G LFGRFWQPK+RNPNN
Sbjct: 123 ARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPHGDSHGRGGLFGRFWQPKLRNPNN 182

Query: 171 RWDYNLNMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ 228
           RWDYNLN+FLRSCYQNSFRSE+FR NIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
Sbjct: 183 RWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ 239

[Close]

BLAST of MELO3C011698 vs. ExPASy TrEMBL
Match: A0A6J1F870 (transcription factor MYB117-like OS=Cucurbita moschata OX=3662 GN=LOC111443207 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 6.0e-73
Identity = 158/240 (65.83%), Postives = 178/240 (74.17%), Query Frame = 0


Query: 2   AGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLD 61
           A  +GDD KSCPRGHWRP EDEKLR+LV+Q+G QNWNFIAEKLQGRSG  CRLRWFNQLD
Sbjct: 8   ASTSGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRSGKSCRLRWFNQLD 67

Query: 62  PRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           PRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 
Sbjct: 68  PRINRRPFTEEEEERLLTAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNF 127

Query: 122 NNLPTRKKITSNYQQFLLHSK--------LISHSHGDGHGGGELFGRFWQPKIRNPNNRW 181
           +          N+ +F + SK          + +HG G GGG LF RFW+   +NPNN+W
Sbjct: 128 S------ATKLNFPEFFIGSKSSLAASAIARTRTHGGGCGGG-LFRRFWER--QNPNNQW 187

Query: 182 D------YNLNMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFLGVE 227
           +      +  ++FLR  YQ+S    NF+ N RSKS I FEI NE VE+KD KFIDFLGVE
Sbjct: 188 NNSFFPHFPSSLFLR-WYQSSLDLRNFKEN-RSKS-INFEISNELVEKKDIKFIDFLGVE 235

[Close]

BLAST of MELO3C011698 vs. ExPASy TrEMBL
Match: A0A6J1IBV4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111473941 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.7e-70
Identity = 156/244 (63.93%), Postives = 177/244 (72.54%), Query Frame = 0


Query: 2   AGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLD 61
           A   GDD KSCPRGHWRP EDEKLR+LV+Q+G QNWNFIAEKLQGRSG  CRLRWFNQLD
Sbjct: 8   ASTFGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRSGKSCRLRWFNQLD 67

Query: 62  PRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           PRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN 
Sbjct: 68  PRINRRPFTEEEEERLLTAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNF 127

Query: 122 NNLPTRKKITSNYQQFLLHSK--------LISHSHGDGHG---GGELFGRFWQPKIRNPN 181
           +          N+ +  + SK          + +HG G G   GG LF RF   + +NPN
Sbjct: 128 S------ATKLNFHELFIGSKSSPTAPAIARTRTHGGGGGCGCGGGLFRRF--SERQNPN 187

Query: 182 NRWDYNL------NMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERKDAKFIDFL 228
           N+W+ +L      ++FLR  Y++S    N + N RSKS I FEI NESVE+KD KFIDFL
Sbjct: 188 NQWNNSLFPHFSSSVFLR-WYKSSLDLRNCKDN-RSKS-INFEISNESVEKKDVKFIDFL 240

[Close]

BLAST of MELO3C011698 vs. ExPASy TrEMBL
Match: A0A1U8AR74 (transcription factor MYB23 OS=Nelumbo nucifera OX=4432 GN=LOC104606735 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 8.7e-56
Identity = 116/177 (65.54%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 5   AGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRI 64
           A DD K+CPRGHWRPAEDEKLRQLV+Q+GPQNWN IAEKLQGRSG  CRLRWFNQLDPRI
Sbjct: 8   ASDDGKTCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 67

Query: 65  NRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNL 124
           NRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARK R++S     
Sbjct: 68  NRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKHRERSKLYG- 127

Query: 125 PTRKKITSNYQQFLLHSKLISHSHGDGHGGGELFGRFWQPKIRNPNNRWDYNLNMFL 181
              K+   N+  FL +S   SH           +G+  +P+I N +  + +N + FL
Sbjct: 128 ---KRGCQNF--FLRNSSASSHD----------YGKCSRPQIENQSKEFQFNRSEFL 168

[Close]

BLAST of MELO3C011698 vs. ExPASy TrEMBL
Match: W9RYV9 (Transcription factor OS=Morus notabilis OX=981085 GN=L484_005386 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 7.3e-55
Identity = 115/167 (68.86%), Postives = 124/167 (74.25%), Query Frame = 0


Query: 5   AGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRI 64
           + DDAKSCPRGHWRPAEDEKLRQLV+Q+G QNWN IAEKLQGRSG  CRLRWFNQLDPRI
Sbjct: 11  SADDAKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 70

Query: 65  NRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS----- 124
           NRRPFTEEEEE+LL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQR++S     
Sbjct: 71  NRRPFTEEEEEKLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREESKLCGK 130

Query: 125 --------------NNNNLPTRKKITSNYQQFLLHSKLISHSHGDGH 152
                         +  N P R KITS    F ++   I H H  GH
Sbjct: 131 RSSCQLQDHVYCNDSEGNFPAR-KITS----FGIYDNNIDHYHNHGH 172

[Close]

BLAST of MELO3C011698 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 195.3 bits (495), Expect = 5.4e-50
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 12  CPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFTE 71
           C RGHWRPAEDEKL+ LV+Q+GP NWN IA KL GRSG  CRLRWFNQLDPRINR PFTE
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 72  EEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLPTRKKIT 131
           EEEERLL AH IHGN+W++IARLFPGRTDNAVKNHWHVIMAR+ RQ S    LP+    T
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPS----T 123

Query: 132 SNYQQFLLHSKLISHSHGDGH 152
           ++    +   +++  S G  H
Sbjct: 124 TSSSSLMASEQIMMSSGGYNH 140

[Close]

BLAST of MELO3C011698 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-49
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 11  SCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFT 70
           S  RGHWRPAED KL++LV  +GPQNWN IAEKLQGRSG  CRLRWFNQLDPRINRR FT
Sbjct: 104 SVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFT 163

Query: 71  EEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN 121
           EEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHVIMARK R+QS++
Sbjct: 164 EEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSS 214

[Close]

BLAST of MELO3C011698 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-49
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 12  CPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFTE 71
           C RGHWRPAEDEKLR+LV+Q GP NWN IA+KL GRSG  CRLRWFNQLDPRINR PFTE
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 72  EEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS 119
           EEEERLL +H IHGN+W++IAR FPGRTDNAVKNHWHVIMAR+ R++S
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERS 110

[Close]

BLAST of MELO3C011698 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-48
Identity = 89/128 (69.53%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 14  RGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFTEEE 73
           RGHWRPAED KL++LV  +GPQNWN IAEKLQGRSG  CRLRWFNQLDPRINRR FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 74  EERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN-------NNNLPT 133
           EERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHV+MARK R+ S+        +N P 
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPL 217

[Close]

BLAST of MELO3C011698 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-48
Identity = 89/128 (69.53%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 14  RGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG-ICRLRWFNQLDPRINRRPFTEEE 73
           RGHWRPAED KL++LV  +GPQNWN IAEKLQGRSG  CRLRWFNQLDPRINRR FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 74  EERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN-------NNNLPT 133
           EERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHV+MARK R+ S+        +N P 
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPL 217

The following BLAST results are available for this feature:

BLAST of MELO3C011698 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651846.1	3.2e-121	92.98	hypothetical protein Csa_006140 [Cucumis sativus]	[more]
XP_023535350.1	9.5e-73	66.25	transcription factor MYB105-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936691.1	1.2e-72	65.83	transcription factor MYB117-like [Cucurbita moschata]	[more]
KAG6592163.1	6.1e-72	65.42	Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022975017.1	9.8e-70	63.93	transcription factor CSA-like [Cucurbita maxima]	[more]

BLAST of MELO3C011698 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX36	7.6e-49	66.67	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q5NBM8	1.3e-48	78.95	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9SEZ4	1.1e-47	79.28	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q6R0C4	1.1e-47	79.63	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q9LQX5	3.2e-47	69.53	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]

BLAST of MELO3C011698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKW9	5.8e-92	93.22	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G22994...	[more]
A0A6J1F870	6.0e-73	65.83	transcription factor MYB117-like OS=Cucurbita moschata OX=3662 GN=LOC111443207 P...	[more]
A0A6J1IBV4	4.7e-70	63.93	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111473941 PE=4 S...	[more]
A0A1U8AR74	8.7e-56	65.54	transcription factor MYB23 OS=Nelumbo nucifera OX=4432 GN=LOC104606735 PE=4 SV=1	[more]
W9RYV9	7.3e-55	68.86	Transcription factor OS=Morus notabilis OX=981085 GN=L484_005386 PE=4 SV=1	[more]

BLAST of MELO3C011698 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73410.1	5.4e-50	66.67	myb domain protein 54	[more]
AT1G69560.1	7.8e-49	79.28	myb domain protein 105	[more]
AT1G17950.1	7.8e-49	79.63	myb domain protein 52	[more]
AT1G26780.1	2.3e-48	69.53	myb domain protein 117	[more]
AT1G26780.2	2.3e-48	69.53	myb domain protein 117	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 64..112 e-value: 6.3E-16 score: 68.9 coord: 13..61 e-value: 3.0E-9 score: 46.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 14..59 score: 8.652646
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 60..110 score: 9.697762
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 79..107 e-value: 4.05237E-5 score: 37.9402
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..57 e-value: 6.45366E-10 score: 51.037
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..58 e-value: 7.8E-11 score: 42.0 coord: 65..108 e-value: 2.6E-16 score: 59.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 60..114 score: 28.137375
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..59 score: 16.896364
None	No IPR available	GENE3D	1.10.10.60		coord: 14..64 e-value: 1.4E-20 score: 75.0
None	No IPR available	GENE3D	1.10.10.60		coord: 66..136 e-value: 1.1E-20 score: 75.5
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 8..129
None	No IPR available	PANTHER	PTHR45614:SF176	OS08G0435700 PROTEIN	coord: 8..129
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011698.1	MELO3C011698.1	mRNA