MELO3C011581 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGTGGCCAGCATGCAGTGGGTTCTGCTGGAACGATGATGTAAAATACATAATTACGGAGAAGCAAGTCGTCGATAACTGGGTTAGGGTAAGGAAAATAATCTAAATGTGACACTACTTGCGCATTGTACATTTAGTTTACAATTTCTGTATAAGTAGTTTTAAGTGGTCCTTTTTTTTTATGCAGTCGCATCCTGTAGCAAAGGACATCCTTAACAAATCCTTGCCGTATTACGACGAACTTGCATATGTGTTCGATCGAGATAGGGCGACGGGTCACTTTGTTGAGACATTCACCAACGTCGGGTTTAACGAGCCTAATGGGTATGAGGGGTTTGACATGTCGGATGGGAACAAAGAGTTTTCATCCTTGTACAGCCAAGGGATTGACATTTCCCAAGATGATGTACGTGCATCATGA ATGCGGTGGCCAGCATGCAGTGGGTTCTGCTGGAACGATGATGTAAAATACATAATTACGGAGAAGCAAGTCGTCGATAACTGGGTTAGGTCGCATCCTGTAGCAAAGGACATCCTTAACAAATCCTTGCCGTATTACGACGAACTTGCATATGTGTTCGATCGAGATAGGGCGACGGGTCACTTTGTTGAGACATTCACCAACGTCGGGTTTAACGAGCCTAATGGGTATGAGGGGTTTGACATGTCGGATGGGAACAAAGAGTTTTCATCCTTGTACAGCCAAGGGATTGACATTTCCCAAGATGATGTACGTGCATCATGA ATGCGGTGGCCAGCATGCAGTGGGTTCTGCTGGAACGATGATGTAAAATACATAATTACGGAGAAGCAAGTCGTCGATAACTGGGTTAGGTCGCATCCTGTAGCAAAGGACATCCTTAACAAATCCTTGCCGTATTACGACGAACTTGCATATGTGTTCGATCGAGATAGGGCGACGGGTCACTTTGTTGAGACATTCACCAACGTCGGGTTTAACGAGCCTAATGGGTATGAGGGGTTTGACATGTCGGATGGGAACAAAGAGTTTTCATCCTTGTACAGCCAAGGGATTGACATTTCCCAAGATGATGTACGTGCATCATGA MRWPACSGFCWNDDVKYIITEKQVVDNWVRSHPVAKDILNKSLPYYDELAYVFDRDRATGHFVETFTNVGFNEPNGYEGFDMSDGNKEFSSLYSQGIDISQDDVRAS Homology
BLAST of MELO3C011581 vs. NCBI nr
Match: KAA0063924.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK11308.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 231.1 bits (588), Expect = 4.5e-57 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MELO3C011581 vs. NCBI nr
Match: KAA0033884.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01268.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38 Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of MELO3C011581 vs. NCBI nr
Match: KAA0045003.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38 Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of MELO3C011581 vs. NCBI nr
Match: KAA0041550.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK19704.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 167.9 bits (424), Expect = 4.7e-38 Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of MELO3C011581 vs. NCBI nr
Match: KAA0060332.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22081.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 167.2 bits (422), Expect = 7.9e-38 Identity = 76/104 (73.08%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of MELO3C011581 vs. ExPASy TrEMBL
Match: A0A5A7V9L7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1827G00170 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.2e-57 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MELO3C011581 vs. ExPASy TrEMBL
Match: A0A5D3BQI7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00550 PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 7.8e-39 Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of MELO3C011581 vs. ExPASy TrEMBL
Match: A0A5A7TNB5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G003130 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.0e-38 Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of MELO3C011581 vs. ExPASy TrEMBL
Match: A0A5D3D831 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001060 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.3e-38 Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of MELO3C011581 vs. ExPASy TrEMBL
Match: A0A5A7UWV7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00660 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.8e-38 Identity = 76/104 (73.08%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of MELO3C011581 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 8.0e-04 Identity = 18/56 (32.14%), Postives = 32/56 (57.14%), Query Frame = 0
BLAST of MELO3C011581 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 8.0e-04 Identity = 18/56 (32.14%), Postives = 32/56 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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