MELO3C011458 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011458
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CBFD_NFYB_HMF domain-containing protein
Location	chr03: 23564378 .. 23565287 (+)
RNA-Seq Expression	MELO3C011458
Synteny	MELO3C011458

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATAATTTGTTCGTAATTCTGGATCGAAAGCCATTTTTCGGCAGCCATCACTTCATTCAGATTCCGGATATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGTCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAGGCGCTCAATCTTCAACGGGCAAAAGCTCACAAGCACAATTTATGGCTTACTTTTTGGCGTTTGTTTGTCTAGAGTTAGCAACTCCATATTTGATCACTAGAGGATAAAATTGTTTGTTAAAGAACATTACATGACTTATACTATCTTGTTTATTTCAACAAAATTTCATTTAAATTTCACATAAGTAGAACAAAATTCAAACTAGAACACTGAATTGATGCAGTTGAGATGAAGTTTGATACAACGTGGACAATCAAAACGAAGGGTGGTTGACTTTCACTCTCTATGTATAAGCATTATTTTGTGGACCTAGATTGAGGTTTGTACAGGAAAAATAATTGAAATGAAAAAGAAAGTCAGACAGAATAATTACTCGAGTATCTCTCTATTTTCCACTAAGACATAAGCTTATTCGC

mRNA sequence

AGAATAATTTGTTCGTAATTCTGGATCGAAAGCCATTTTTCGGCAGCCATCACTTCATTCAGATTCCGGATATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGTCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAGGCGCTCAATCTTCAACGGGCAAAAGCTCACAAGCACAATTTATGGCTTACTTTTTGGCGTTTGTTTGTCTAGAGTTAGCAACTCCATATTTGATCACTAGAGGATAAAATTGTTTGTTAAAGAACATTACATGACTTATACTATCTTGTTTATTTCAACAAAATTTCATTTAAATTTCACATAAGTAGAACAAAATTCAAACTAGAACACTGAATTGATGCAGTTGAGATGAAGTTTGATACAACGTGGACAATCAAAACGAAGGGTGGTTGACTTTCACTCTCTATGTATAAGCATTATTTTGTGGACCTAGATTGAGGTTTGTACAGGAAAAATAATTGAAATGAAAAAGAAAGTCAGACAGAATAATTACTCGAGTATCTCTCTATTTTCCACTAAGACATAAGCTTATTCGC

Coding sequence (CDS)

ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGTCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG

Protein sequence

MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTRRIDDFFRRPTKTTSAETNES

Homology

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BLAST of MELO3C011458 vs. NCBI nr
Match: XP_008445504.1 (PREDICTED: dr1-associated corepressor [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MELO3C011458 vs. NCBI nr
Match: KAA0064731.1 (dr1-associated corepressor [Cucumis melo var. makuwa])

HSP 1 Score: 260.8 bits (665), Expect = 6.9e-66
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDA AKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MELO3C011458 vs. NCBI nr
Match: XP_004144200.1 (DNA polymerase epsilon subunit C [Cucumis sativus] >KGN47612.1 hypothetical protein Csa_018931 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 2.5e-60
Identity = 130/137 (94.89%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MEEEE GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAE AA
Sbjct: 1   MEEEEFGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDA AKDENR RAVVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAET 138
           RIDDFFRR TKT SAET
Sbjct: 121 RIDDFFRRSTKTKSAET 137

[Close]

BLAST of MELO3C011458 vs. NCBI nr
Match: XP_038884228.1 (NCT transcriptional regulatory complex subunit A [Benincasa hispida])

HSP 1 Score: 240.7 bits (613), Expect = 7.4e-60
Identity = 128/140 (91.43%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEESG+AIRPEFPTGRVKKIMKLDKDI KVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MAEEESGDAIRPEFPTGRVKKIMKLDKDIEKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLP QPSDA AKDENR R VVDKV P GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPPQPSDAPAKDENRTRTVVDKVVPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRP KTTSAE NES
Sbjct: 121 RIDDFFRRPAKTTSAENNES 140

[Close]

BLAST of MELO3C011458 vs. NCBI nr
Match: XP_022997291.1 (DNA polymerase epsilon subunit C [Cucurbita maxima])

HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRH+SISDFLLDSLPLPSQPSDA AKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of MELO3C011458 vs. ExPASy Swiss-Prot
Match: B0XTT5 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=nctA PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.9e-08
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 70  EHIRMAVKRHRSISDFLLDSL-PLPSQPSDASAKDEN 106
            H++ AV +   + DFL D +  +P QP+     D++
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDD 225

[Close]

BLAST of MELO3C011458 vs. ExPASy Swiss-Prot
Match: Q4X095 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=nctA PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.9e-08
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 70  EHIRMAVKRHRSISDFLLDSL-PLPSQPSDASAKDEN 106
            H++ AV +   + DFL D +  +P QP+     D++
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDD 225

[Close]

BLAST of MELO3C011458 vs. ExPASy Swiss-Prot
Match: Q9W256 (DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 8   EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTV 67
           EA   + P  R++ IMKLD D+   N+EA+F+V+ A ELF+  L+ +S    A+ K+KT+
Sbjct: 72  EAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTI 131

Query: 68  KLEHIRMAV 77
           +   + MA+
Sbjct: 132 QKRDVDMAI 140

[Close]

BLAST of MELO3C011458 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 14 FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D++IGKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71

Query: 74 MAVKRHRSISDFLLD 89
            ++  +   DFL D
Sbjct: 72 QCIELEQQF-DFLKD 85

[Close]

BLAST of MELO3C011458 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 14 FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D++IGKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71

Query: 74 MAVKRHRSISDFLLD 89
            ++  +   DFL D
Sbjct: 72 QCIELEQQF-DFLKD 85

[Close]

BLAST of MELO3C011458 vs. ExPASy TrEMBL
Match: A0A1S3BDL4 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.2e-67
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MELO3C011458 vs. ExPASy TrEMBL
Match: A0A5A7VG98 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00350 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-66
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDA AKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MELO3C011458 vs. ExPASy TrEMBL
Match: A0A0A0KGV1 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G365140 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60
Identity = 130/137 (94.89%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MEEEE GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAE AA
Sbjct: 1   MEEEEFGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDA AKDENR RAVVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAET 138
           RIDDFFRR TKT SAET
Sbjct: 121 RIDDFFRRSTKTKSAET 137

[Close]

BLAST of MELO3C011458 vs. ExPASy TrEMBL
Match: A0A6J1K737 (DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.0e-59
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRH+SISDFLLDSLPLPSQPSDA AKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of MELO3C011458 vs. ExPASy TrEMBL
Match: A0A6J1HCT3 (DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.8e-59
Identity = 124/140 (88.57%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKS+EVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRH+SI DFLLDSLPLPSQPSDA AKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSIGDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of MELO3C011458 vs. TAIR 10
Match: AT5G43250.1 (nuclear factor Y, subunit C13 )

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-36
Identity = 89/139 (64.03%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MEEEE   +IRPEFP GRVKKIMKLDKDI K+NSEAL +++ +TELFL  LAEKSA V A
Sbjct: 1   MEEEEG--SIRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPA--- 120
           EKKRKTV L+H+R+AVKRH+  SDFLLDSLPLP+QP           ++V DK  PA   
Sbjct: 61  EKKRKTVNLDHLRIAVKRHQPTSDFLLDSLPLPAQP-------VKHTKSVSDKKIPAPPI 120

Query: 121 GTRRIDDFFRR-PTKTTSA 136
           GTRRIDDFF +   KT SA
Sbjct: 121 GTRRIDDFFSKGKAKTDSA 130

[Close]

BLAST of MELO3C011458 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 )

HSP 1 Score: 55.8 bits (133), Expect = 3.1e-08
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 14 FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D+D+GK+      LVS + ELFL+ L +++ E+  E+  KTV   H++
Sbjct: 9  FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLK 68

Query: 74 MAVKRHRSISDFL 87
            V+R+ ++ DFL
Sbjct: 69 HCVERY-NVFDFL 80

[Close]

BLAST of MELO3C011458 vs. TAIR 10
Match: AT1G07980.1 (nuclear factor Y, subunit C10 )

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 28/91 (30.77%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 2   EEEESG-EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 61
           EE++ G E  + +FP  R+++IM+ D    ++  +A+FLV+ ATE+F++  +E++ + + 
Sbjct: 97  EEDDGGAEDAKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSV 156

Query: 62  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLP 92
           + K+K +  +H+   V   +   +FL DS+P
Sbjct: 157 KDKKKFIHYKHLSSVVSNDQRY-EFLADSVP 186

[Close]

BLAST of MELO3C011458 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++  FP  R+KKIM+ D+++GK+      LVS A ELFL+ L   + +V   +  KTV  
Sbjct: 5   LQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNA 64

Query: 70  EHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDEN--RIRAVVD 113
            H++  V+   ++ DFL D++        +  +D++  + R VVD
Sbjct: 65  FHLKQCVQA-TNVFDFLRDTVAKVPDLGGSDTEDQSATKRRKVVD 108

[Close]

BLAST of MELO3C011458 vs. TAIR 10
Match: AT5G27910.1 (nuclear factor Y, subunit C8 )

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06
Identity = 39/106 (36.79%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 13  EFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHI 72
           + P  R+KKIMK D D+  + SEA  L+S A E+F+  L  +S   A E KR T++  ++
Sbjct: 36  DLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNV 95

Query: 73  RMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAG 119
             AV +   I DFLLD      + S A+A D   +  + D   P G
Sbjct: 96  DAAVAQ-TVIFDFLLDDDIEVKRESVAAAADPVAMPPIDDGELPPG 140

The following BLAST results are available for this feature:

BLAST of MELO3C011458 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445504.1	1.1e-66	100.00	PREDICTED: dr1-associated corepressor [Cucumis melo]	[more]
KAA0064731.1	6.9e-66	98.57	dr1-associated corepressor [Cucumis melo var. makuwa]	[more]
XP_004144200.1	2.5e-60	94.89	DNA polymerase epsilon subunit C [Cucumis sativus] >KGN47612.1 hypothetical prot...	[more]
XP_038884228.1	7.4e-60	91.43	NCT transcriptional regulatory complex subunit A [Benincasa hispida]	[more]
XP_022997291.1	2.2e-59	90.00	DNA polymerase epsilon subunit C [Cucurbita maxima]	[more]

BLAST of MELO3C011458 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0XTT5	8.9e-08	35.05	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q4X095	8.9e-08	35.05	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q9W256	1.3e-06	39.13	DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2...	[more]
Q2YDP3	1.7e-06	37.33	Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1	[more]
Q14919	1.7e-06	37.33	Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3	[more]

BLAST of MELO3C011458 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDL4	5.2e-67	100.00	dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1	[more]
A0A5A7VG98	3.3e-66	98.57	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KGV1	1.2e-60	94.89	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G3651...	[more]
A0A6J1K737	1.0e-59	90.00	DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=...	[more]
A0A6J1HCT3	6.8e-59	88.57	DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 P...	[more]

BLAST of MELO3C011458 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43250.1	1.6e-36	64.03	nuclear factor Y, subunit C13	[more]
AT3G12480.1	3.1e-08	41.10	nuclear factor Y, subunit C11	[more]
AT1G07980.1	3.5e-07	30.77	nuclear factor Y, subunit C10	[more]
AT5G19490.1	3.5e-07	32.38	Histone superfamily protein	[more]
AT5G27910.1	2.3e-06	36.79	nuclear factor Y, subunit C8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..91 e-value: 8.7E-24 score: 86.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 12..91
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 13..76 e-value: 2.3E-20 score: 72.6
None	No IPR available	PANTHER	PTHR10252:SF95	NUCLEAR FACTOR Y, SUBUNIT C13	coord: 2..130
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011458.1	MELO3C011458.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046982	protein heterodimerization activity