MELO3C011356 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011356
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Sec-independent protein translocase protein TATC
Location	chr03: 24408956 .. 24410226 (+)
RNA-Seq Expression	MELO3C011356
Synteny	MELO3C011356

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTAACAATTCCTCTGTAAATGGGTTGCTGATAAACCCCATCATCCATTCTTTGGATCAATCAAACATATACATTTTTCTAACTCTTCTATTGATTCTGGGTTGTGTTATTTTCTGTTTTTCAAAAAGAAAAACCCTCTTTTTTTTGTTCAAATTCATACGAATTTCTTTACGATAGTCTATCTTTTTGTTTCGATTGGGACTCTGTTTTCCTTTTCCTTTTTAACTGCAGCGTTTTGATTTTTGTTGATTTTTTCAGGTTCAGATATTTGTAAAGTGCAGCAATGGAGGTAGTTTTGATTCCATTTTCTGCTGATCAATCTCGCAGTTTTAATCCTCAAAATTTATCTCCGGCCACCGTTCACGCCGGTCTTCTTAACTTCCCTCTGCGGGGAATCCCATATAACGGCCGCCGCCACCACCAGCAACCGCCACTTCTCCCTTTGCCCCGCCGTCCACTTCCCCCTTCGGAAACCGGAGCCACGTCCTTCTTTCGCCAAAAGTGTGTGAAATTCAGAGACCAATCTCTTAACCCAAAGAAATCAAAGCCAATAAAACGAAGTAGGGGTCCACCAGCGGCGAAATCGACGGTGGAATTAGTGATCATTGATTCCACCAATAGACTGGGGCCGGAGCCGTGCCACGTTCCTAAAGATTTATGGAGAGTTCTAGGATTACGGCCGTCGGCGCCGATGTGCAAAAGTACCCGAAGTTGGGAGACGGCGGCGGAAATTGAGTTTTCGGGGTCGGCATGCAGCCAATCGCCGCCGCCGAGTAGCGTTCCGCTTCCGAAATTCTCTCTGAGACGGAAGGTGGTTGGTTGTAACGTGGAGGGCGCCGGAGTAGACGCCGGCGCCACTGACAATCTCAGGCGACTATTGCGCCTCCGATGAAGAAGGTTTATGGTTTAATATTGAAAGGGTATTTGTTTGTGTGTTTCTCGCGATCACTACCTTGGTTTTTTGAAATGGGAGGTGAACAAACCAAAACCTGAAAGTCTCTACTTGTAAGTTGTAACCTTTTAGATTCATTAGGGTTTGTAATTCAACAAAGAATATGGTTAAATACATTAGGGTTTGTATGTTAAAAATGGTCACGATGGTCTCTCAACTTTGACTTTTAAAATGCTATTAACTTGGTCATATTTTAGCGCACGCAACAATTTAGAGTAAAGTATCGAGAAAGCATGGGTTGAGAGGTTTGACTAGTAAATATTGGAGCCAAGTGTAAAAACTGAGATCGGAATATAAAATTGATGTTTTTTTAAGTGG

mRNA sequence

AGCTAACAATTCCTCTGTAAATGGGTTGCTGATAAACCCCATCATCCATTCTTTGGATCAATCAAACATATACATTTTTCTAACTCTTCTATTGATTCTGGGTTGTGTTATTTTCTGTTTTTCAAAAAGAAAAACCCTCTTTTTTTTGTTCAAATTCATACGAATTTCTTTACGATAGTCTATCTTTTTGTTTCGATTGGGACTCTGTTTTCCTTTTCCTTTTTAACTGCAGCGTTTTGATTTTTGTTGATTTTTTCAGGTTCAGATATTTGTAAAGTGCAGCAATGGAGGTAGTTTTGATTCCATTTTCTGCTGATCAATCTCGCAGTTTTAATCCTCAAAATTTATCTCCGGCCACCGTTCACGCCGGTCTTCTTAACTTCCCTCTGCGGGGAATCCCATATAACGGCCGCCGCCACCACCAGCAACCGCCACTTCTCCCTTTGCCCCGCCGTCCACTTCCCCCTTCGGAAACCGGAGCCACGTCCTTCTTTCGCCAAAAGTGTGTGAAATTCAGAGACCAATCTCTTAACCCAAAGAAATCAAAGCCAATAAAACGAAGTAGGGGTCCACCAGCGGCGAAATCGACGGTGGAATTAGTGATCATTGATTCCACCAATAGACTGGGGCCGGAGCCGTGCCACGTTCCTAAAGATTTATGGAGAGTTCTAGGATTACGGCCGTCGGCGCCGATGTGCAAAAGTACCCGAAGTTGGGAGACGGCGGCGGAAATTGAGTTTTCGGGGTCGGCATGCAGCCAATCGCCGCCGCCGAGTAGCGTTCCGCTTCCGAAATTCTCTCTGAGACGGAAGGTGGTTGGTTGTAACGTGGAGGGCGCCGGAGTAGACGCCGGCGCCACTGACAATCTCAGGCGACTATTGCGCCTCCGATGAAGAAGGTTTATGGTTTAATATTGAAAGGGTATTTGTTTGTGTGTTTCTCGCGATCACTACCTTGGTTTTTTGAAATGGGAGGTGAACAAACCAAAACCTGAAAGTCTCTACTTGTAAGTTGTAACCTTTTAGATTCATTAGGGTTTGTAATTCAACAAAGAATATGGTTAAATACATTAGGGTTTGTATGTTAAAAATGGTCACGATGGTCTCTCAACTTTGACTTTTAAAATGCTATTAACTTGGTCATATTTTAGCGCACGCAACAATTTAGAGTAAAGTATCGAGAAAGCATGGGTTGAGAGGTTTGACTAGTAAATATTGGAGCCAAGTGTAAAAACTGAGATCGGAATATAAAATTGATGTTTTTTTAAGTGG

Coding sequence (CDS)

ATGGAGGTAGTTTTGATTCCATTTTCTGCTGATCAATCTCGCAGTTTTAATCCTCAAAATTTATCTCCGGCCACCGTTCACGCCGGTCTTCTTAACTTCCCTCTGCGGGGAATCCCATATAACGGCCGCCGCCACCACCAGCAACCGCCACTTCTCCCTTTGCCCCGCCGTCCACTTCCCCCTTCGGAAACCGGAGCCACGTCCTTCTTTCGCCAAAAGTGTGTGAAATTCAGAGACCAATCTCTTAACCCAAAGAAATCAAAGCCAATAAAACGAAGTAGGGGTCCACCAGCGGCGAAATCGACGGTGGAATTAGTGATCATTGATTCCACCAATAGACTGGGGCCGGAGCCGTGCCACGTTCCTAAAGATTTATGGAGAGTTCTAGGATTACGGCCGTCGGCGCCGATGTGCAAAAGTACCCGAAGTTGGGAGACGGCGGCGGAAATTGAGTTTTCGGGGTCGGCATGCAGCCAATCGCCGCCGCCGAGTAGCGTTCCGCTTCCGAAATTCTCTCTGAGACGGAAGGTGGTTGGTTGTAACGTGGAGGGCGCCGGAGTAGACGCCGGCGCCACTGACAATCTCAGGCGACTATTGCGCCTCCGATGA

Protein sequence

MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLPPSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCHVPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGCNVEGAGVDAGATDNLRRLLRLR

Homology

[Close]

BLAST of MELO3C011356 vs. NCBI nr
Match: KAA0064835.1 (sec-independent protein translocase protein TATC [Cucumis melo var. makuwa])

HSP 1 Score: 416.0 bits (1068), Expect = 1.9e-112
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP
Sbjct: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH
Sbjct: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC
Sbjct: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVEGAGVDAGATDNLRRLLRLR
Sbjct: 181 NVEGAGVDAGATDNLRRLLRLR 202

[Close]

BLAST of MELO3C011356 vs. NCBI nr
Match: KGN62252.1 (hypothetical protein Csa_018627 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 3.6e-92
Identity = 171/202 (84.65%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           MEVV IPFSADQSR FNPQN SPA VH G LNFPL GI YN  R HQQPPLLPLPRRPLP
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           PSE GAT   R KC++FRDQSL PKKSKPIKRSRGPPAAKSTVELVI+DSTNRLGPEP H
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDL  +LGLRPS P+C+STRSWETAAEIEFSGSA SQSPPPSSVPLPKFSLRRKVVGC
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVE +GVDAGATDNLRRLLR+R
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of MELO3C011356 vs. NCBI nr
Match: XP_038884839.1 (uncharacterized protein LOC120075485 [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 2.9e-81
Identity = 159/203 (78.33%), Postives = 170/203 (83.74%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           ME VL+PFS  +SRSFNPQN SPATVH GL NFP   + Y   RHHQQPPLLPLPRRP P
Sbjct: 1   MEAVLVPFS--ESRSFNPQNFSPATVHGGLFNFPPPAVTYFSHRHHQQPPLLPLPRRPFP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSR-GPPAAKSTVELVIIDSTNRLGPEPC 120
           P ETGAT+F R KC K RDQSL PKKSKPIKRS+ GPPA KSTVE VI+DSTNRLGPEP 
Sbjct: 61  PPETGATAFCRPKC-KSRDQSLTPKKSKPIKRSKGGPPAVKSTVEFVIVDSTNRLGPEPS 120

Query: 121 HVPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVG 180
           HVPKDLW+VLGL+ SAP C+ +RS  TAAE+EFSGSA S SPPPSSVPLPKFSLRRKVV 
Sbjct: 121 HVPKDLWKVLGLQSSAPPCEGSRSLGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVS 180

Query: 181 CNVEGAGVDAGATDNLRRLLRLR 203
           CNVE AGVDAGATDNLRRLLRLR
Sbjct: 181 CNVEAAGVDAGATDNLRRLLRLR 200

[Close]

BLAST of MELO3C011356 vs. NCBI nr
Match: XP_023546813.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 7.9e-71
Identity = 145/202 (71.78%), Postives = 155/202 (76.73%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           ME VLIPFSA++SRS    N SPATVH GLLN P   +P    RHHQQPPLLPLPRRP P
Sbjct: 1   MEAVLIPFSAERSRSLKSCNFSPATVHDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           P+  GA    R K  K RDQSL PKKSKPIKRSRGPPA KST E +I+DSTNRLGPEP H
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLWRVLGLR SAP  +  RS+ET    EFSGS    SPPPSSVPLPKF+LRR+ V C
Sbjct: 121 VPKDLWRVLGLRSSAPPREGGRSFET----EFSGSGFGVSPPPSSVPLPKFNLRRE-VSC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVE AGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of MELO3C011356 vs. NCBI nr
Match: XP_022997633.1 (uncharacterized protein LOC111492508 [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-70
Identity = 143/202 (70.79%), Postives = 155/202 (76.73%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           ME VLIPFSA++SRS   +N SPATVH G+LN P   +P    RHHQQPPLLPLP RP P
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPFP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           P+  G     R K  K RDQSL PKKSKPIKRSRGPPA KST E +I+DSTNRLGPEP H
Sbjct: 61  PTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLWRVLGLR SAP  +  RS+ET    EFSGSA   SPPPSSVPLPKF+LRR+ V C
Sbjct: 121 VPKDLWRVLGLRSSAPPREGGRSFET----EFSGSAFGVSPPPSSVPLPKFTLRRE-VSC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVE AGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of MELO3C011356 vs. ExPASy TrEMBL
Match: A0A5A7VG22 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001470 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 9.0e-113
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP
Sbjct: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH
Sbjct: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC
Sbjct: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVEGAGVDAGATDNLRRLLRLR
Sbjct: 181 NVEGAGVDAGATDNLRRLLRLR 202

[Close]

BLAST of MELO3C011356 vs. ExPASy TrEMBL
Match: A0A0A0LN70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 171/202 (84.65%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           MEVV IPFSADQSR FNPQN SPA VH G LNFPL GI YN  R HQQPPLLPLPRRPLP
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           PSE GAT   R KC++FRDQSL PKKSKPIKRSRGPPAAKSTVELVI+DSTNRLGPEP H
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDL  +LGLRPS P+C+STRSWETAAEIEFSGSA SQSPPPSSVPLPKFSLRRKVVGC
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVE +GVDAGATDNLRRLLR+R
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of MELO3C011356 vs. ExPASy TrEMBL
Match: A0A6J1KEH8 (uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 143/202 (70.79%), Postives = 155/202 (76.73%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           ME VLIPFSA++SRS   +N SPATVH G+LN P   +P    RHHQQPPLLPLP RP P
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPFP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           P+  G     R K  K RDQSL PKKSKPIKRSRGPPA KST E +I+DSTNRLGPEP H
Sbjct: 61  PTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLWRVLGLR SAP  +  RS+ET    EFSGSA   SPPPSSVPLPKF+LRR+ V C
Sbjct: 121 VPKDLWRVLGLRSSAPPREGGRSFET----EFSGSAFGVSPPPSSVPLPKFTLRRE-VSC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVE AGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of MELO3C011356 vs. ExPASy TrEMBL
Match: A0A6J1HFM4 (uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC111463019 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.7e-68
Identity = 141/202 (69.80%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60
           ME VLIPFSA++SRS   +N  PATVH GLLN P   +P    R  QQPPLLPLPRRP P
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRLRQQPPLLPLPRRPFP 60

Query: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120
           P+  GA    R K  K RDQSL PKKSKPIKRSRGPPA KST E +I+DSTNRLGPEP H
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLWRVLGLR SAP  +  R +ET    EFSGSA   SPPPSSVPLPKF+LRR+ + C
Sbjct: 121 VPKDLWRVLGLRSSAPPREGGRRFET----EFSGSAFGVSPPPSSVPLPKFTLRRE-MSC 180

Query: 181 NVEGAGVDAGATDNLRRLLRLR 203
           NVE AGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of MELO3C011356 vs. ExPASy TrEMBL
Match: A0A6J1GI76 (uncharacterized protein LOC111454434 OS=Cucurbita moschata OX=3662 GN=LOC111454434 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 8.0e-45
Identity = 113/189 (59.79%), Postives = 126/189 (66.67%), Query Frame = 0


Query: 18  PQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLPPSETGATSFFRQKCVKF 77
           P N SPA         P      + RRH +QPP  PLPRR  PPS   A    R K V+F
Sbjct: 7   PHNFSPAA--------PAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRF 66

Query: 78  RDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCHVPKDLWRVLGLR---PS 137
           RDQSL PKKSK IKR R  P  + T E +I+DSTNR+GPEP HVPKDL  VLGLR   PS
Sbjct: 67  RDQSLAPKKSKSIKRCRELP-VEMTAEALIVDSTNRMGPEPSHVPKDLCVVLGLRLPPPS 126

Query: 138 APMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGCNVE-GAGVDAGATD 197
           +P  + +RS   AAEIEFSGSA + SPPPSSVPLP F L RK + CNVE  AG+DAGATD
Sbjct: 127 SPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK-LNCNVEAAAGIDAGATD 185

Query: 198 NLRRLLRLR 203
           NLRRLLRLR
Sbjct: 187 NLRRLLRLR 185

[Close]

BLAST of MELO3C011356 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07
Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 160 SPPPSSVPLPKFSLRRKVVGCNVEGAGVDAGATDNLRRLLRLR 203
           SPPPSS+P+P+FS++ K + CNVE AG    AT+N+RR+L+LR
Sbjct: 152 SPPPSSLPMPRFSIKPK-LRCNVEAAGKSDVATNNIRRVLQLR 193

[Close]

BLAST of MELO3C011356 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 6.8e-04
Identity = 25/66 (37.88%), Postives = 35/66 (53.03%), Query Frame = 0


Query: 106 VIIDSTNRLGPEPCHVPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSS 165
           +I+ +TNR+GPEP  + K +   LGL+                   F+G+ CS SPPPS 
Sbjct: 97  LIVSATNRIGPEPEILMKQI-GALGLQ------------------SFAGANCSLSPPPSC 143

Query: 166 VPLPKF 172
           VP+P F
Sbjct: 157 VPIPCF 143

The following BLAST results are available for this feature:

BLAST of MELO3C011356 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064835.1	1.9e-112	100.00	sec-independent protein translocase protein TATC [Cucumis melo var. makuwa]	[more]
KGN62252.1	3.6e-92	84.65	hypothetical protein Csa_018627 [Cucumis sativus]	[more]
XP_038884839.1	2.9e-81	78.33	uncharacterized protein LOC120075485 [Benincasa hispida]	[more]
XP_023546813.1	7.9e-71	71.78	proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]	[more]
XP_022997633.1	3.0e-70	70.79	uncharacterized protein LOC111492508 [Cucurbita maxima]	[more]

BLAST of MELO3C011356 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C011356 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG22	9.0e-113	100.00	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LN70	1.8e-92	84.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1	[more]
A0A6J1KEH8	1.4e-70	70.79	uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508...	[more]
A0A6J1HFM4	6.7e-68	69.80	uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A6J1GI76	8.0e-45	59.79	uncharacterized protein LOC111454434 OS=Cucurbita moschata OX=3662 GN=LOC1114544...	[more]

BLAST of MELO3C011356 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20070.1	1.7e-07	58.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02040.1	6.8e-04	37.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670:SF14	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 18..202
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 18..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011356.1	MELO3C011356.1	mRNA