MELO3C011239 (gene) Melon (DHL92) v4

Overview
NameMELO3C011239
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUPF0481 protein At3g47200-like
Locationchr03: 25208359 .. 25208697 (+)
RNA-Seq ExpressionMELO3C011239
SyntenyMELO3C011239
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATATGATAAGTACAGAGAAAGACGTACGTATACTTGTGAACTCTGAAGTCATAGTGAATAATATTGGTGGCAGTGATAAAGAAGTTACAGAATTGTTCAACAATCTAGCTAAATTTATCAATTCTTTCAACATAAATTCTTCCAAGTTCAACCATATCAGTAAAGCTTTGCATAAGCACTGTAATGGAAGGTGGAACAAGGCGAAAGCTTCACTGAAACATAACTATTTCAATACGCCATGGGCCTTTATCTCCTTCTTTGCTGGATCCTTCCTCCTTCTTCTCACACTTCCTCAAACCATTTTCTCTGGCATCTCTGCATTTCCTAGCTAG

mRNA sequence

ATGGATGATATGATAAGTACAGAGAAAGACGTACGTATACTTGTGAACTCTGAAGTCATAGTGAATAATATTGGTGGCAGTGATAAAGAAGTTACAGAATTGTTCAACAATCTAGCTAAATTTATCAATTCTTTCAACATAAATTCTTCCAAGTTCAACCATATCAGTAAAGCTTTGCATAAGCACTGTAATGGAAGGTGGAACAAGGCGAAAGCTTCACTGAAACATAACTATTTCAATACGCCATGGGCCTTTATCTCCTTCTTTGCTGGATCCTTCCTCCTTCTTCTCACACTTCCTCAAACCATTTTCTCTGGCATCTCTGCATTTCCTAGCTAG

Coding sequence (CDS)

ATGGATGATATGATAAGTACAGAGAAAGACGTACGTATACTTGTGAACTCTGAAGTCATAGTGAATAATATTGGTGGCAGTGATAAAGAAGTTACAGAATTGTTCAACAATCTAGCTAAATTTATCAATTCTTTCAACATAAATTCTTCCAAGTTCAACCATATCAGTAAAGCTTTGCATAAGCACTGTAATGGAAGGTGGAACAAGGCGAAAGCTTCACTGAAACATAACTATTTCAATACGCCATGGGCCTTTATCTCCTTCTTTGCTGGATCCTTCCTCCTTCTTCTCACACTTCCTCAAACCATTTTCTCTGGCATCTCTGCATTTCCTAGCTAG

Protein sequence

MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALHKHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS
Homology
BLAST of MELO3C011239 vs. NCBI nr
Match: XP_016899961.1 (PREDICTED: uncharacterized protein LOC107990712 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH
Sbjct: 192 MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 251

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS
Sbjct: 252 KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 303

BLAST of MELO3C011239 vs. NCBI nr
Match: KAA0064948.1 (UPF0481 protein [Cucumis melo var. makuwa])

HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH
Sbjct: 466 MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 525

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFA SFL+LLTL QTIFSGISAFPS
Sbjct: 526 KHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVLLTLLQTIFSGISAFPS 577

BLAST of MELO3C011239 vs. NCBI nr
Match: KAA0064945.1 (UPF0481 protein [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           +DD+ISTEKDVR+LVNS VI+NNIGGSDKEV+ELFNNL KF+N    N   FNHISKAL 
Sbjct: 427 IDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKFVNHCR-NPYMFNHISKALR 486

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTL QTIFSGISAFPS
Sbjct: 487 KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLLQTIFSGISAFPS 537

BLAST of MELO3C011239 vs. NCBI nr
Match: XP_008445584.2 (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           +DD+ISTEKDVR+LVNS VI+NNIGGSDKEV+ELFNNL KF+N    N   FNHISKAL 
Sbjct: 427 IDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKFVNHCR-NPYMFNHISKALR 486

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTL QTIFSGISAFPS
Sbjct: 487 KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLLQTIFSGISAFPS 537

BLAST of MELO3C011239 vs. NCBI nr
Match: KAA0064946.1 (UPF0481 protein [Cucumis melo var. makuwa])

HSP 1 Score: 180.6 bits (457), Expect = 7.3e-42
Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MDD+ISTEKDVR+LVNS VI+NNIGGSDKEV+ELFNNL KF+N    +   FNHISKAL 
Sbjct: 426 MDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKFVNQCP-SPYMFNHISKALR 485

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFA SFL+LLTL QTIFSGISAFPS
Sbjct: 486 KHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVLLTLLQTIFSGISAFPS 536

BLAST of MELO3C011239 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.5e-09
Identity = 34/108 (31.48%), Postives = 66/108 (61.11%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           M  +++ E+DV  L N ++I+ N  GS+ EV+E F  ++K +  F +++S  N++ K ++
Sbjct: 351 MGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKTISKDV-VFEVDTSYLNNVFKGVN 410

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGIS 109
           ++    +N   A  +H +F +PW F+S  A  F++LLT+ Q+  + +S
Sbjct: 411 EYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFVILLTMLQSTVAILS 457

BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A1S4DVE9 (uncharacterized protein LOC107990712 OS=Cucumis melo OX=3656 GN=LOC107990712 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH
Sbjct: 192 MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 251

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS
Sbjct: 252 KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 303

BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A5A7VBG0 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002670 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH
Sbjct: 466 MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 525

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFA SFL+LLTL QTIFSGISAFPS
Sbjct: 526 KHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVLLTLLQTIFSGISAFPS 577

BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A5A7VGD0 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002640 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           +DD+ISTEKDVR+LVNS VI+NNIGGSDKEV+ELFNNL KF+N    N   FNHISKAL 
Sbjct: 427 IDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKFVNHCR-NPYMFNHISKALR 486

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTL QTIFSGISAFPS
Sbjct: 487 KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLLQTIFSGISAFPS 537

BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A1S3BDS2 (UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488564 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           +DD+ISTEKDVR+LVNS VI+NNIGGSDKEV+ELFNNL KF+N    N   FNHISKAL 
Sbjct: 427 IDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKFVNHCR-NPYMFNHISKALR 486

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTL QTIFSGISAFPS
Sbjct: 487 KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLLQTIFSGISAFPS 537

BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A5A7VF39 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002650 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.5e-42
Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MDD+ISTEKDVR+LVNS VI+NNIGGSDKEV+ELFNNL KF+N    +   FNHISKAL 
Sbjct: 426 MDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKFVNQCP-SPYMFNHISKALR 485

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS 113
           KHCNGRWNKAKASLKHNYFNTPWAFISFFA SFL+LLTL QTIFSGISAFPS
Sbjct: 486 KHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVLLTLLQTIFSGISAFPS 536

BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-15
Identity = 42/110 (38.18%), Postives = 72/110 (65.45%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MD++I + +D+R L   ++I + + G+D EV ++FN L + + +F++ ++  + +S  + 
Sbjct: 428 MDNLIDSAEDIRYLHYYDIIEHWL-GNDSEVADVFNRLCQEV-AFDLENTYLSELSNKVD 487

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAF 111
           ++ N +WN  KA+LKH YF+ PWA+ SFFA   LLLLTL Q+ F+    F
Sbjct: 488 RYYNRKWNVLKATLKHKYFSNPWAYFSFFAAVILLLLTLFQSFFTSYPYF 535

BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 74.7 bits (182), Expect = 5.2e-14
Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MD++I + +DVR L    +I + + G+D EV +LFN L + + +F+  +S  + +S  + 
Sbjct: 453 MDNLIDSSEDVRYLHYCGIIEHWL-GNDYEVADLFNRLCQEV-AFDPQNSYLSQLSNKVD 512

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAF 111
           ++ + +WN  KA LKH YFN PWA+ SFFA   LL+LTL Q+ F+    F
Sbjct: 513 RNYSRKWNVLKAILKHKYFNNPWAYFSFFAALVLLVLTLFQSFFTAYPYF 560

BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 71.2 bits (173), Expect = 5.8e-13
Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MD++I++ +DV  L    +I + + GSD EV +LFN L + +  F+   S  + +S  ++
Sbjct: 428 MDNLINSSEDVSYLHYCGIIEHWL-GSDSEVADLFNRLCQEV-VFDPKDSHLSRLSGDVN 487

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFS 106
           ++ N +WN  KA+L H YFN PWA+ SF A   LLLLTL Q+ ++
Sbjct: 488 RYYNRKWNVLKATLTHKYFNNPWAYFSFSAAVILLLLTLCQSFYA 530

BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50160.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-12
Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MD++I++ +DV  L +  +I N + GSD EV++LFN L K +  F+ N    + ++  ++
Sbjct: 390 MDNLINSSEDVSYLHHYGIIENWL-GSDSEVSDLFNGLGKEV-IFDPNDGYLSALTGEVN 449

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAF 111
            +   +WN  KA+L+H YFN PWA+ SF A   LL+ T  Q+ F+  + F
Sbjct: 450 IYYRRKWNYLKATLRHKYFNNPWAYFSFIAAVTLLIFTFCQSFFAVFAYF 497

BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50150.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-12
Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = 0

Query: 1   MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALH 60
           MD++I++ +DV  L + + I+ +  GSD EV +LFN L K +  F+      + +S+ ++
Sbjct: 398 MDNLINSSQDVSYL-HHDGIIEHWLGSDSEVADLFNRLCKEV-IFDPKDGYLSQLSREVN 457

Query: 61  KHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFS 106
           ++ + +WN  KA+L+  YFN PWA+ SF A   LL LT  Q+ F+
Sbjct: 458 RYYSRKWNSLKATLRQKYFNNPWAYFSFSAAVILLFLTFFQSFFA 500

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016899961.12.2e-54100.00PREDICTED: uncharacterized protein LOC107990712 [Cucumis melo][more]
KAA0064948.13.5e-5297.32UPF0481 protein [Cucumis melo var. makuwa][more]
KAA0064945.13.9e-4384.82UPF0481 protein [Cucumis melo var. makuwa][more]
XP_008445584.23.9e-4384.82PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo][more]
KAA0064946.17.3e-4283.04UPF0481 protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9SD536.5e-0931.48UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S4DVE91.1e-54100.00uncharacterized protein LOC107990712 OS=Cucumis melo OX=3656 GN=LOC107990712 PE=... [more]
A0A5A7VBG01.7e-5297.32UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00267... [more]
A0A5A7VGD01.9e-4384.82UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00264... [more]
A0A1S3BDS21.9e-4384.82UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488564 PE=4 SV=1[more]
A0A5A7VF393.5e-4283.04UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00265... [more]
Match NameE-valueIdentityDescription
AT3G50140.13.6e-1538.18Plant protein of unknown function (DUF247) [more]
AT3G50130.15.2e-1440.00Plant protein of unknown function (DUF247) [more]
AT3G50170.15.8e-1340.00Plant protein of unknown function (DUF247) [more]
AT3G50160.11.7e-1237.27Plant protein of unknown function (DUF247) [more]
AT3G50150.12.2e-1237.14Plant protein of unknown function (DUF247) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 1..97
e-value: 2.4E-25
score: 89.6
NoneNo IPR availablePANTHERPTHR31170BNAC04G53230D PROTEINcoord: 1..107
NoneNo IPR availablePANTHERPTHR31170:SF13BNAC04G53230D PROTEINcoord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011239.1MELO3C011239.1mRNA