MELO3C011239 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATATGATAAGTACAGAGAAAGACGTACGTATACTTGTGAACTCTGAAGTCATAGTGAATAATATTGGTGGCAGTGATAAAGAAGTTACAGAATTGTTCAACAATCTAGCTAAATTTATCAATTCTTTCAACATAAATTCTTCCAAGTTCAACCATATCAGTAAAGCTTTGCATAAGCACTGTAATGGAAGGTGGAACAAGGCGAAAGCTTCACTGAAACATAACTATTTCAATACGCCATGGGCCTTTATCTCCTTCTTTGCTGGATCCTTCCTCCTTCTTCTCACACTTCCTCAAACCATTTTCTCTGGCATCTCTGCATTTCCTAGCTAG ATGGATGATATGATAAGTACAGAGAAAGACGTACGTATACTTGTGAACTCTGAAGTCATAGTGAATAATATTGGTGGCAGTGATAAAGAAGTTACAGAATTGTTCAACAATCTAGCTAAATTTATCAATTCTTTCAACATAAATTCTTCCAAGTTCAACCATATCAGTAAAGCTTTGCATAAGCACTGTAATGGAAGGTGGAACAAGGCGAAAGCTTCACTGAAACATAACTATTTCAATACGCCATGGGCCTTTATCTCCTTCTTTGCTGGATCCTTCCTCCTTCTTCTCACACTTCCTCAAACCATTTTCTCTGGCATCTCTGCATTTCCTAGCTAG ATGGATGATATGATAAGTACAGAGAAAGACGTACGTATACTTGTGAACTCTGAAGTCATAGTGAATAATATTGGTGGCAGTGATAAAGAAGTTACAGAATTGTTCAACAATCTAGCTAAATTTATCAATTCTTTCAACATAAATTCTTCCAAGTTCAACCATATCAGTAAAGCTTTGCATAAGCACTGTAATGGAAGGTGGAACAAGGCGAAAGCTTCACTGAAACATAACTATTTCAATACGCCATGGGCCTTTATCTCCTTCTTTGCTGGATCCTTCCTCCTTCTTCTCACACTTCCTCAAACCATTTTCTCTGGCATCTCTGCATTTCCTAGCTAG MDDMISTEKDVRILVNSEVIVNNIGGSDKEVTELFNNLAKFINSFNINSSKFNHISKALHKHCNGRWNKAKASLKHNYFNTPWAFISFFAGSFLLLLTLPQTIFSGISAFPS Homology
BLAST of MELO3C011239 vs. NCBI nr
Match: XP_016899961.1 (PREDICTED: uncharacterized protein LOC107990712 [Cucumis melo]) HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MELO3C011239 vs. NCBI nr
Match: KAA0064948.1 (UPF0481 protein [Cucumis melo var. makuwa]) HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of MELO3C011239 vs. NCBI nr
Match: KAA0064945.1 (UPF0481 protein [Cucumis melo var. makuwa]) HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43 Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of MELO3C011239 vs. NCBI nr
Match: XP_008445584.2 (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]) HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43 Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of MELO3C011239 vs. NCBI nr
Match: KAA0064946.1 (UPF0481 protein [Cucumis melo var. makuwa]) HSP 1 Score: 180.6 bits (457), Expect = 7.3e-42 Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of MELO3C011239 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.5e-09 Identity = 34/108 (31.48%), Postives = 66/108 (61.11%), Query Frame = 0
BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A1S4DVE9 (uncharacterized protein LOC107990712 OS=Cucumis melo OX=3656 GN=LOC107990712 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A5A7VBG0 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002670 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A5A7VGD0 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002640 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43 Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A1S3BDS2 (UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488564 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43 Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of MELO3C011239 vs. ExPASy TrEMBL
Match: A0A5A7VF39 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002650 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.5e-42 Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 78.6 bits (192), Expect = 3.6e-15 Identity = 42/110 (38.18%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 74.7 bits (182), Expect = 5.2e-14 Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 0
BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 71.2 bits (173), Expect = 5.8e-13 Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 0
BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50160.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 69.7 bits (169), Expect = 1.7e-12 Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 0
BLAST of MELO3C011239 vs. TAIR 10
Match: AT3G50150.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 69.3 bits (168), Expect = 2.2e-12 Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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