MELO3C011201 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011201
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	PAP_fibrillin domain-containing protein
Location	chr03: 25552106 .. 25554890 (-)
RNA-Seq Expression	MELO3C011201
Synteny	MELO3C011201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGTAAACACAACCCCGCAATCCATCTCGTCGTGGGTCCGACCTCCGATTTTCCCCACGCAAATTTCAGCGGCGAGCCAAATGCCATCCCAGCGTTCATCTTCTGATCCTGTATGACTTCCATGGCTGCCTCGGCAACCTCCGTTGCACTTTTGCCTTCAAAACTGGTTTTCAGGGGACGATTCGAGCAGTCGAGATCGAAGTTTCTTACTCCAAGCTCAGCATCCTCAATTCCATGTCATTCCATTTCAATTTCATCTCCGTTCCATCGGCGCAAGCCATTAGGAATTCAGGCGTCGGTTTCGACCTCGGATCCTCAAGTCCGAACTGGTCCTGATGATCTCGTTGCGTCTATCCTCTCGAAGGTAATGTTTGAAGATTTGCTTAGTTTATTTGGTCTTGCAACTGGTTATAGGGTAAATTATAGTGGCTTCGGAATTGAGTTTGGGAAAATTTTAGTAGAAAATGCGTAGCAAATAGAGGCCAGTAAGTTGCGGCAACGAGTGGTACTGGACTTGGAAATTTCCAGAAATTTTTTCTGGATAATGATCATTCGGTTGGTAGAGGCAGTTTACGTGACTTCCTCACGAGCGTCTTAAGATTTCAGTATGATCTTGGTCAACAGTGCACAAGTTGATGTTACACTTTGAAACAGGTGACAGGAAGCGATAGAGGAGTATTACTAAGTGAAGAAAAGCACAAAGAGGTTGCTGAAGTCGCGCAAGAATTGCAGAAGTATTGTGTAAACGAGCCTGTTAAATGTCCTCTCATATTTGGAGGTAAAACTTAAACAGTTCTGCTGTTTTTTGTTTGATATGTTTGAATATTTCATCTACTCATCTTCCTTATGGAGCCTATGTTCGAGCTTTGTATCCGCATAAAGAAAGTTTAAGGGATGATTTCATATCACCTTATTTGAAATACCAGAAATTATTTGAATTCTTTATCTAGATGGTTGTTGAAAAGGAATGGGGAAAAACCCTATACAGTCCTTCAGTCCTGATTTATGAGAAGGTTAAATTAGCTGTTTAGTTGGGCATGTTTTAAAACCACTTTGGTTTAACTTACGAGCTTAGTCTCTAAACTTTTAGATTTTCGTCCACCTAGTTTCTAACTTTCTCTATTACAATTCAATGTAGCTTTCATAATTTTCAAAACTTCCGAATCTACAAGACACGAGTTACAAAGCTTAGGGTTTCGTTTGATATCAAATTCAATTCTATATTTAATTACAATTCAATGTAGCTTTCATAATTTTCAAAACTTGTGAATCTACAAGACACAAGTTACAAAGCTTAGAGTTCTGTTTGATATCAAATTCAATTCTATATTTAATAGATCAATTAATTCTTAAAAATTGTGTATTCGTCGTAGACTTATAAGACACTCTTGAAATTTCAAGAACCACATAGACAAAAACCTAAAGTTGAGATACTAAATTGAAAATTGAACCAATCATATTCTTTGATGGATGAGAAATATTTGTATTGACTTGTAAGTCATCTGAATCTAAAATCACGTTTAGACCCAAAAAGAGTATTTCATCCAAGTTGTTGCTCATTTTCCAGCTCTAGTTTGGCTAACATGATTAAATGCTTGGTGTCTCAGCTTGGGATGTTGTGTATTGCTCTGTACCAACATCGCCTGGGGGTGGATACAGAAGTGCAGTGGGTCGCATTTTTTTCAAGACAAAGGAAATGATTCAGGTTGTGGAAGCTCCTGATACTATAAAAAACAAGGTGTCATTTTCTGCCCTTGGTTTCTTGGATGGACAAGTCTCTTTGACAGGTAAAACTTCAAATTTCCTTTGTGAAAAATAGAACTTGAGCCCTACATTGGTAAATATATCAGAGAATCAAATCAATGGCTGGAACATAGCTGACATAGCCTCTGGATTTTTGGTTGACTTGCTGTGATATATGTAATCTAGTTCAGACCACTAGTTTTTATTAGAGAACTCGATATGACTTTTGAGAGTAATATTTTTAATTGAAATATATTTGTTGAACTTATTTTGAAGGAACTAAATGTAAAATAGCTTCACTTTAAATTATTACTCTAAAAAAGAGACTTTTTCAACCCAACAGAAATGAATACTTGGTTGATAATCATTTAGTTTTTTCTAATTAAAAATTTGTAAACTACTTTTGAGTTTGTATTGAAACAACTTGCAAAATTTGGAATATGTTATTACTCACTTCAGCAATTTAATTACATTGTTACTGATTAAAGCATCTTCTTTTTCTTCAGCACGATTCTGAAGGATTATGAACTTATTGACCAAGTTTTAGGAATTTAAGACGCCAACCCTTACTCTTAGAATTGATTTAGATGATTATGTTTCATCCAGTGTCTTCAATTTACCTGTCCATGGAGGAGATTCTCATGAATTCTCCCTTCTTTGATGAAGAAAGAATTTTGTGGCATATTTGTTTCTCTGCTATTTTATAGGATGGGTAACTTGCAAAATTTGGAATATGTTTTAAGGTTTCTAGGGATAAGGTTAGGGGCGTTTGGCCATTGAGTGAATGTAATAATTATGGAGTTTGTAAATTTGTAAGATTGAGTTCTTTATAATTTGAGAAAAGTAGATGAATCTAGATGAAGTTATTGGATAAATATGAAAAATAGGGATTGAGAAAAAGATGGTGTTATTCAATAAGCTTGAAAAATAGAAAAAGGTAGAAAGATGAAATTATTCGATAAGTGTGTAAACTTCAATAATTTTTGCCATCGAAGTTGAGTTATTTACACCAACTTAAAGTAGTTGGTGAGCTAAAAAGAA

mRNA sequence

GGCGTAAACACAACCCCGCAATCCATCTCGTCGTGGGTCCGACCTCCGATTTTCCCCACGCAAATTTCAGCGGCGAGCCAAATGCCATCCCAGCGTTCATCTTCTGATCCTGTATGACTTCCATGGCTGCCTCGGCAACCTCCGTTGCACTTTTGCCTTCAAAACTGGTTTTCAGGGGACGATTCGAGCAGTCGAGATCGAAGTTTCTTACTCCAAGCTCAGCATCCTCAATTCCATGTCATTCCATTTCAATTTCATCTCCGTTCCATCGGCGCAAGCCATTAGGAATTCAGGCGTCGGTTTCGACCTCGGATCCTCAAGTCCGAACTGGTCCTGATGATCTCGTTGCGTCTATCCTCTCGAAGGTGACAGGAAGCGATAGAGGAGTATTACTAAGTGAAGAAAAGCACAAAGAGGTTGCTGAAGTCGCGCAAGAATTGCAGAAGTATTGTGTAAACGAGCCTGTTAAATGTCCTCTCATATTTGGAGCTTGGGATGTTGTGTATTGCTCTGTACCAACATCGCCTGGGGGTGGATACAGAAGTGCAGTGGGTCGCATTTTTTTCAAGACAAAGGAAATGATTCAGGTTGTGGAAGCTCCTGATACTATAAAAAACAAGGTGTCATTTTCTGCCCTTGGTTTCTTGGATGGACAAGTCTCTTTGACAGGTAAAACTTCAAATTTCCTTTGTGAAAAATAGAACTTGAGCCCTACATTGGTAAATATATCAGAGAATCAAATCAATGGCTGGAACATAGCTGACATAGCCTCTGGATTTTTGGTTGACTTGCTGTGATATATGTAATCTAGTTCAGACCACTAGTTTTTATTAGAGAACTCGATATGACTTTTGAGAGTAATATTTTTAATTGAAATATATTTGTTGAACTTATTTTGAAGGAACTAAATGTAAAATAGCTTCACTTTAAATTATTACTCTAAAAAAGAGACTTTTTCAACCCAACAGAAATGAATACTTGGTTGATAATCATTTAGTTTTTTCTAATTAAAAATTTGTAAACTACTTTTGAGTTTGTATTGAAACAACTTGCAAAATTTGGAATATGTTATTACTCACTTCAGCAATTTAATTACATTGTTACTGATTAAAGCATCTTCTTTTTCTTCAGCACGATTCTGAAGGATTATGAACTTATTGACCAAGTTTTAGGAATTTAAGACGCCAACCCTTACTCTTAGAATTGATTTAGATGATTATGTTTCATCCAGTGTCTTCAATTTACCTGTCCATGGAGGAGATTCTCATGAATTCTCCCTTCTTTGATGAAGAAAGAATTTTGTGGCATATTTGTTTCTCTGCTATTTTATAGGATGGGTAACTTGCAAAATTTGGAATATGTTTTAAGGTTTCTAGGGATAAGGTTAGGGGCGTTTGGCCATTGAGTGAATGTAATAATTATGGAGTTTGTAAATTTGTAAGATTGAGTTCTTTATAATTTGAGAAAAGTAGATGAATCTAGATGAAGTTATTGGATAAATATGAAAAATAGGGATTGAGAAAAAGATGGTGTTATTCAATAAGCTTGAAAAATAGAAAAAGGTAGAAAGATGAAATTATTCGATAAGTGTGTAAACTTCAATAATTTTTGCCATCGAAGTTGAGTTATTTACACCAACTTAAAGTAGTTGGTGAGCTAAAAAGAA

Coding sequence (CDS)

ATGACTTCCATGGCTGCCTCGGCAACCTCCGTTGCACTTTTGCCTTCAAAACTGGTTTTCAGGGGACGATTCGAGCAGTCGAGATCGAAGTTTCTTACTCCAAGCTCAGCATCCTCAATTCCATGTCATTCCATTTCAATTTCATCTCCGTTCCATCGGCGCAAGCCATTAGGAATTCAGGCGTCGGTTTCGACCTCGGATCCTCAAGTCCGAACTGGTCCTGATGATCTCGTTGCGTCTATCCTCTCGAAGGTGACAGGAAGCGATAGAGGAGTATTACTAAGTGAAGAAAAGCACAAAGAGGTTGCTGAAGTCGCGCAAGAATTGCAGAAGTATTGTGTAAACGAGCCTGTTAAATGTCCTCTCATATTTGGAGCTTGGGATGTTGTGTATTGCTCTGTACCAACATCGCCTGGGGGTGGATACAGAAGTGCAGTGGGTCGCATTTTTTTCAAGACAAAGGAAATGATTCAGGTTGTGGAAGCTCCTGATACTATAAAAAACAAGGTGTCATTTTCTGCCCTTGGTTTCTTGGATGGACAAGTCTCTTTGACAGGTAAAACTTCAAATTTCCTTTGTGAAAAATAG

Protein sequence

MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKCPLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDGQVSLTGKTSNFLCEK

Homology

[Close]

BLAST of MELO3C011201 vs. NCBI nr
Match: XP_008445102.1 (PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Cucumis melo])

HSP 1 Score: 365.5 bits (937), Expect = 2.8e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ
Sbjct: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC
Sbjct: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG
Sbjct: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
           QVSLTGK
Sbjct: 181 QVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. NCBI nr
Match: KAA0064987.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 2.8e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ
Sbjct: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC
Sbjct: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG
Sbjct: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
           QVSLTGK
Sbjct: 181 QVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. NCBI nr
Match: XP_004138759.1 (probable plastid-lipid-associated protein 8, chloroplastic [Cucumis sativus])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 179/187 (95.72%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTP+S SS PCHSISISSPFHRRKP GIQ
Sbjct: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPTSTSSFPCHSISISSPFHRRKPFGIQ 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVS SDPQVRTGPDDLVASILSKVTGSDRGVLLSEE+HKEVAEVA+ELQKYCVNEPVKC
Sbjct: 61  ASVSISDPQVRTGPDDLVASILSKVTGSDRGVLLSEEQHKEVAEVAEELQKYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQ VEAPDTIKNKVSFSALGFLDG
Sbjct: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQAVEAPDTIKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
           QVSLTGK
Sbjct: 181 QVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. NCBI nr
Match: XP_038884041.1 (probable plastid-lipid-associated protein 8, chloroplastic [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86
Identity = 166/184 (90.22%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 4   MAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQASV 63
           MAASATSVALLP+K VFRGR E S+SKFL PSS+S IPCHS+SISS F RRKP GIQASV
Sbjct: 1   MAASATSVALLPAKFVFRGRIEPSKSKFLAPSSSSPIPCHSVSISSRFRRRKPFGIQASV 60

Query: 64  STSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKCPLI 123
           S SDPQV+TGPDDLVASILSKVTGSDRGVLL+EEKHKEVAE AQELQKYCVNEPVKCPLI
Sbjct: 61  SISDPQVQTGPDDLVASILSKVTGSDRGVLLTEEKHKEVAEAAQELQKYCVNEPVKCPLI 120

Query: 124 FGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDGQVS 183
           FG WDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDT+KNKVSFSALGFLDGQVS
Sbjct: 121 FGDWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTVKNKVSFSALGFLDGQVS 180

Query: 184 LTGK 188
           LTGK
Sbjct: 181 LTGK 184

[Close]

BLAST of MELO3C011201 vs. NCBI nr
Match: XP_022132330.1 (probable plastid-lipid-associated protein 8, chloroplastic [Momordica charantia])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 163/187 (87.17%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           M SMAASATSVALLP+K VFRGR E SRSKFL   S SS+PC S SISS  +RRKPL I 
Sbjct: 1   MISMAASATSVALLPAKSVFRGRVEPSRSKFLASRSTSSVPCQSASISSSSYRRKPLVIL 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVSTSDPQVRTGPD LVASILSKVT SDRGVLL+EEKHKEVAEVAQELQ YCVNEPVKC
Sbjct: 61  ASVSTSDPQVRTGPDHLVASILSKVTQSDRGVLLTEEKHKEVAEVAQELQNYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFG WDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDT+KNKVSFSALGFLDG
Sbjct: 121 PLIFGDWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTVKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
            VSLTGK
Sbjct: 181 HVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. ExPASy Swiss-Prot
Match: Q941D3 (Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP8 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-48
Identity = 103/185 (55.68%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 4   MAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLG-IQAS 63
           MAA+A+S+ +  S       F + R++  +    +    +SI       R + LG + +S
Sbjct: 1   MAATASSLTIASS-------FSEPRTQIHSSRRLNLPLQYSIPYKVLRSRSRRLGLVVSS 60

Query: 64  VSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKCPL 123
           VS  + ++RTGPDDL++++LSKV  SD GV LS E+HKEVA+VA ELQKYCV EPVK PL
Sbjct: 61  VSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPL 120

Query: 124 IFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDGQV 183
           IFG W+VVYCS PTSPGGGYRS +GR+FFKTKEMIQ ++APD ++NKVS +A GFLDG V
Sbjct: 121 IFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDV 178

Query: 184 SLTGK 188
           SLTGK
Sbjct: 181 SLTGK 178

[Close]

BLAST of MELO3C011201 vs. ExPASy TrEMBL
Match: A0A5A7VD74 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003090 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ
Sbjct: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC
Sbjct: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG
Sbjct: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
           QVSLTGK
Sbjct: 181 QVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. ExPASy TrEMBL
Match: A0A1S3BBV9 (probable plastid-lipid-associated protein 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488243 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ
Sbjct: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC
Sbjct: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG
Sbjct: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
           QVSLTGK
Sbjct: 181 QVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. ExPASy TrEMBL
Match: A0A0A0LM49 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G379140 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.9e-94
Identity = 179/187 (95.72%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTP+S SS PCHSISISSPFHRRKP GIQ
Sbjct: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPTSTSSFPCHSISISSPFHRRKPFGIQ 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVS SDPQVRTGPDDLVASILSKVTGSDRGVLLSEE+HKEVAEVA+ELQKYCVNEPVKC
Sbjct: 61  ASVSISDPQVRTGPDDLVASILSKVTGSDRGVLLSEEQHKEVAEVAEELQKYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQ VEAPDTIKNKVSFSALGFLDG
Sbjct: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQAVEAPDTIKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
           QVSLTGK
Sbjct: 181 QVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. ExPASy TrEMBL
Match: A0A6J1BS60 (probable plastid-lipid-associated protein 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005210 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.0e-81
Identity = 163/187 (87.17%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MTSMAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQ 60
           M SMAASATSVALLP+K VFRGR E SRSKFL   S SS+PC S SISS  +RRKPL I 
Sbjct: 1   MISMAASATSVALLPAKSVFRGRVEPSRSKFLASRSTSSVPCQSASISSSSYRRKPLVIL 60

Query: 61  ASVSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKC 120
           ASVSTSDPQVRTGPD LVASILSKVT SDRGVLL+EEKHKEVAEVAQELQ YCVNEPVKC
Sbjct: 61  ASVSTSDPQVRTGPDHLVASILSKVTQSDRGVLLTEEKHKEVAEVAQELQNYCVNEPVKC 120

Query: 121 PLIFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDG 180
           PLIFG WDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDT+KNKVSFSALGFLDG
Sbjct: 121 PLIFGDWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTVKNKVSFSALGFLDG 180

Query: 181 QVSLTGK 188
            VSLTGK
Sbjct: 181 HVSLTGK 187

[Close]

BLAST of MELO3C011201 vs. ExPASy TrEMBL
Match: A0A6J1KBD6 (probable plastid-lipid-associated protein 8, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492369 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.3e-80
Identity = 161/184 (87.50%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 4   MAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLGIQASV 63
           MA SATSVA L +K+V RGR E S+SKFL  SS SSI C S SISS FHRRKP  IQASV
Sbjct: 1   MAVSATSVAPLLAKVVSRGRIEPSKSKFLASSSTSSILCQSTSISSRFHRRKPFVIQASV 60

Query: 64  STSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKCPLI 123
           S SDPQVRTGPDDLVASILSKVTGSDRGVLL+E KHKEVAEVAQELQKYCVNEPVKCPLI
Sbjct: 61  SISDPQVRTGPDDLVASILSKVTGSDRGVLLTEGKHKEVAEVAQELQKYCVNEPVKCPLI 120

Query: 124 FGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDGQVS 183
           FG WDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTI+NKVSFSALGFLDGQVS
Sbjct: 121 FGDWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIRNKVSFSALGFLDGQVS 180

Query: 184 LTGK 188
           LTGK
Sbjct: 181 LTGK 184

[Close]

BLAST of MELO3C011201 vs. TAIR 10
Match: AT5G19940.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.3e-49
Identity = 103/185 (55.68%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 4   MAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLG-IQAS 63
           MAA+A+S+ +  S       F + R++  +    +    +SI       R + LG + +S
Sbjct: 1   MAATASSLTIASS-------FSEPRTQIHSSRRLNLPLQYSIPYKVLRSRSRRLGLVVSS 60

Query: 64  VSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKCPL 123
           VS  + ++RTGPDDL++++LSKV  SD GV LS E+HKEVA+VA ELQKYCV EPVK PL
Sbjct: 61  VSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPL 120

Query: 124 IFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDGQV 183
           IFG W+VVYCS PTSPGGGYRS +GR+FFKTKEMIQ ++APD ++NKVS +A GFLDG V
Sbjct: 121 IFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDV 178

Query: 184 SLTGK 188
           SLTGK
Sbjct: 181 SLTGK 178

[Close]

BLAST of MELO3C011201 vs. TAIR 10
Match: AT5G19940.2 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.3e-49
Identity = 103/185 (55.68%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 4   MAASATSVALLPSKLVFRGRFEQSRSKFLTPSSASSIPCHSISISSPFHRRKPLG-IQAS 63
           MAA+A+S+ +  S       F + R++  +    +    +SI       R + LG + +S
Sbjct: 1   MAATASSLTIASS-------FSEPRTQIHSSRRLNLPLQYSIPYKVLRSRSRRLGLVVSS 60

Query: 64  VSTSDPQVRTGPDDLVASILSKVTGSDRGVLLSEEKHKEVAEVAQELQKYCVNEPVKCPL 123
           VS  + ++RTGPDDL++++LSKV  SD GV LS E+HKEVA+VA ELQKYCV EPVK PL
Sbjct: 61  VSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPL 120

Query: 124 IFGAWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTIKNKVSFSALGFLDGQV 183
           IFG W+VVYCS PTSPGGGYRS +GR+FFKTKEMIQ ++APD ++NKVS +A GFLDG V
Sbjct: 121 IFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDV 178

Query: 184 SLTGK 188
           SLTGK
Sbjct: 181 SLTGK 178

The following BLAST results are available for this feature:

BLAST of MELO3C011201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445102.1	2.8e-97	100.00	PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Cucumis m...	[more]
KAA0064987.1	2.8e-97	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_004138759.1	1.4e-93	95.72	probable plastid-lipid-associated protein 8, chloroplastic [Cucumis sativus]	[more]
XP_038884041.1	2.2e-86	90.22	probable plastid-lipid-associated protein 8, chloroplastic [Benincasa hispida]	[more]
XP_022132330.1	2.1e-81	87.17	probable plastid-lipid-associated protein 8, chloroplastic [Momordica charantia]	[more]

BLAST of MELO3C011201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941D3	3.2e-48	55.68	Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of MELO3C011201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD74	1.3e-97	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BBV9	1.3e-97	100.00	probable plastid-lipid-associated protein 8, chloroplastic OS=Cucumis melo OX=36...	[more]
A0A0A0LM49	6.9e-94	95.72	PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G3791...	[more]
A0A6J1BS60	1.0e-81	87.17	probable plastid-lipid-associated protein 8, chloroplastic OS=Momordica charanti...	[more]
A0A6J1KBD6	3.3e-80	87.50	probable plastid-lipid-associated protein 8, chloroplastic OS=Cucurbita maxima O...	[more]

BLAST of MELO3C011201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19940.1	2.3e-49	55.68	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT5G19940.2	2.3e-49	55.68	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 79..187 e-value: 3.2E-6 score: 27.2
None	No IPR available	PANTHER	PTHR31906:SF25	PLASTID-LIPID-ASSOCIATED PROTEIN 8, CHLOROPLASTIC-RELATED	coord: 26..188
IPR039633	Plastid-lipid-associated protein	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 26..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011201.1	MELO3C011201.1	mRNA