MELO3C011121 (gene) Melon (DHL92) v4

Overview
NameMELO3C011121
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRNA polymerase sigma factor sigC
Locationchr03: 26159174 .. 26163942 (-)
RNA-Seq ExpressionMELO3C011121
SyntenyMELO3C011121
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCATGTATTTTTTCTAAGAAGAAACGATGGTCTCTTGACAATTTTCCAACTCGGGACCCGACCCGCCAAGAAATATCCATTCGAAACTCGTCGACGGAGAGGAGATATTTTCTTGAACTTTTTTTGTTCGAGTAAGCAAAAGGAAACTTGTTGATTTTCCAAATTCTTAAAAAAAGGGATTAAGAATTGGTGGTAGAGAATTTGCAGTTTCGACGTCCACATTTTTCACTCATCAGATTGCATATGACTAATTTACTACTACTTCACCACCAAGCTTCTGCCTCTCCCTGGCTCCAATTTTCATGATGGGAACATGTTTTAGGCCAAATCTCAAGTGGGGTTTTCAAATTCAGACTCATTCCCTCAAGAATTCCCCTTCCAAGCTTTCCCCATATGCCTGTTAGTCCCCTTTTCCCTTAACCACTTCATGATTTTGTGTTTTGACGTCGATTCATATCTGGGTTTATAGTTATGAGATATAGAGCTTGTTTTTAGTTATTTTGATTCTGTAATTCATCGAACTTCATCGTTCTCTCTATTGGGTTTTACATTTTTAAGCTTACATTGTTCTGCTTTTTATACGTTTTAAGTTGTTTTGCGATTATCTCGATCATTTGAAGATGGAAAATTTTTGGGGTTTATTTGGGAATTTGGATTGAAGATGATGAACATCCCGCCAAAATCTTGCTCCGGAACGGTTATATATGTATACATCTGTTACATGTCCTGAATTTACACTTGTTTAAGTTTTTGGGGGATTGTTAGGCTCTGAAATTTTCCTCAAGGACTACTGACTACCACTGGACTGATTATGAAGTGAATTTTCGATGATCTATCTTTAATTTGTTTTTCTCCTGCATGGATACGAGTGAGAAAGAGCCTCATTTCTTAATATATATATAAATTGAATCGTCTTTTTAAGGTTATATGACGATATTGGCATTGGGAATGCATTGATAAGTTAGGCTGGTAAAGTGAAACTCCTTTGGATGGGAATGGTATTTTTTAGACCTATGGGGATATCTTCACTCTTATATCCTTCCTTTCAAGAAGGATAAATTGATCCTTTGACTTGATCATATCCATATTTGAGCTTTTTATTGGAACGCTTCGTAATGCCTGCATCTTCACAGATAAGAATCGTAGGTAGCATACGCTATTTTTTGTTGGAATTTGCCTCTCTTTTGGCACTTACAATTTAGCTACCCTCGTTTACCAATAGAGGTATTTTTTCTTATTATTATCTGATAGGATCATCTTTTATATTTGGTTTCACCATATATGGTTTTTGTTTCCTATAAAAGAATAAAATTAGAATACTAGTTATAGTCTCTAATTTGGTTCAGTTCTACATTTTAAAACAGCTAAAGGCAGGGAAGCCGCCTTTAATTCAGGAAGACTTTCCTTCTTCTCAAGTATTTGTGAAGAAGGAGAATCTATACCTAGAGAAACCTTGAAAACATACACTTGCTTGTCTGAAGCTCCACAAACCTCGCCCGATGATCTGTTAAATTTGGAAGAGATTGAGGTTAGCCCTTTGCAATGAACTTCACAACACAAAACCCACACGTAATCTTGACATCACCTAGTTATTTGCTTTTGATAGGATGGATTTCATATGTTATCGTGGGTTTATTATTCTTATCTTTCAGATGAACAGTGGGGCAAAGTCACTTAGTTCTTTGCATTATGGGATTAAAAGTACCAGGCCGTCCAAGGTAGAGGACAATTTTTCTTCCCCTACGAGCATGCCTACTGGCAAGGCGTCACCTTTTGGCATCTTAATGGAAAACCTTGATGTTTTGGAGGAAACTTTTGCTGAATCAGGCATGCTCAGCTTGGAAAGAGATATTGTGCTGCAACTAACGAAACTTGGAGCTTTGGAGTTTTTTAATACCTGTCTATCTAGGACTCTTAAAACTTCAAGTTTTCATGATTTGTCAGACTTACCCGTTGAGGATGGTGAAGATCATAATGTAAACCAGAAAACTAATGACCAGAATTGCGATGTCACAGTTTACTCTGGAAAAAGAGCAGGAAGAAGATCAGTAAAAAAGAGAGCAATGGATAATGCTGATAAAGTTGCTTCCAGGCCGCTGGCTACAAGAGCTGTTAAAGAAAAAATCCACAGTTCGACTATATTTTCGAGAAAAAAATCATCTAATTCTAGTAAAAGAAGACTGGTTGTTGCAAGAAATGAAGCTGAAATGTCCACAGGGATTAAGGTCGATACATCTTTGATGTTTGCACAATCATCTTTTCGATACATATTATGCTAACATTGCTAAGCTTCTATCTCATTCCAGGTAGTTGCAAATTTAGAAAGAATTAGAGAAACCTTAGAAAAGGAATCTGGAAGAATAGCAAGCATGAGTTGTTGGGCCGAAGCTGCCAGCGTTGATATAAAAGACCTGCAGAAACAGTTACAATTTGGTTGGTTCTGCCGGGATGAGCTTTTAAGGAGCACTAATTCATTAGTTCTGTTCCTTGCAAAGAAATACCGATGCTCTGGGTTACCAATGGAGGACTTGGTTCAGGTCTATTCATTACTGTTCTATGAGAAACCTGAGTGCTTTGAATTTCAATGTATATATTCTTTTAAGTTTTGCTTTTTGAAAGAGTATGTGACATTTTTTCCCTTTGTTTAATCATTGATAATGGGTTATCATTTACAAGTTCCATTTTTATCTTGTATGAAACCAAATTTATAACACCATCTAATGGAGATGAAAAGCAGATAATGGTCTTTTCAGCCTACCACCGTAAATTTAGACGAGATTTGTGTTTGATGGTTAAGTATTTCATCAAATTAATGCTCAATGAGGAAATTGATGTCAACATATAAATATGCAAATTTTGAATACTGATGCCTTGCGGATAGAAATTCATTTCTCAAAAGAAATCATAAGGAAAATGCAAGAGCTTATGCATCTTGATATTTGTTTTCTCTTGGATTCGTAGGCAGGAGCCCTTGGTGTGCTGCAAGGTGTTGAAAGGTTTGACCCTAAAAGGGGTTTTAGATTCTCAACGTATATTCAATACTGGATAAGGAAATCAATGTCAAGAGTTGTGGCACGAAATTCAAGGGGAATTCAAATTCCAGTATGATTTCTTTTACACCAGGAGGCGAATTTCATAAAAATTTTCATATTCATGTATAGCTGACTCATCCTTATAATTCTTTGTAGTGGTCATTAACCAAGGCAATAAATCAGATACAAAAAGCGCGAAAAGTGTTGAACCAAGGTGGTAGGAGATATTCCGACGACGATATAGCAAGGGCTACTGGACTTCCTCTAGCCAAGGTTAGAGTTGCCAGCAACTGTTTAAAAGTTGTGGGTTCGGTTGATCAGAAGATGGGTGATGGACTAAATATGAAATATATGGTATGATTTGTTCGCTCTCTTGTTCCCTCTGTTATTGAAGATTTCATTAGCTCCCTACTTACTGTTTGAACTTACTAGACAACTCGGGCATGTTTTGTCTATTTTGTTTTTCTCTCTCATATGTTGATGGGAAATTGTCAAAAATAGCAAAATTGATAAAATATGTACACTTCATACAAAAAAATAAGTGAAATATAGAGGGTAAATAGTTTGTTTTTATATTATTTTTTTAAAAACCCCTGTGTTTGTTAATTGAGAGCGAAGATTTTGTTTAGTGAAGTTGGTTCATCAAAAGCTTATATATTGTTCAAAATGGCAACGCCAGCTTGTAAAGTTGAACTAACTTAAAACGATCGCATTTAAAATATCCCTTCGCAGACTTTTACCATGGGAGAGAAAATCTTAAGAACAATATTTTCCTCTGGATGTTACAGATTACAGAACATACGAAAACTCTGATTTGATATAATTTTCTTATGGTACAGGAATTTACAGCTGATACGTCAATACAGAGCCCAGAAGAGACTGTGAAGCGAAAACTGATGAAGAAAGACATCTTTAATATTCTTCAAGGGTTGGAATCAAGGGAGAGGCAGGTCCTGGTGCTGCGTTACGGACTTATGGATTTCCAGCCCAAGTCGCTGGAGGAAATTGGAAAACTTCTGCACGTAAGCAAGGAATGGGTTCGAAAAATAGAAAAGAAAGCCATGACAAAGCTGAAGAATGAAGAGACTGTGAAGAACTTGAGCCATTACTTGGATTGATCTACTTCTTTCAAGCATGAGAACCTCCAGTCTTTCAAAATTTGCAGCCGGGCGAAGAAGCCAAGGGGTTCGCATTGTGCTTTCGGGCCACACTAACAAAATTGGTTACAATGAGCATATCTCAATCCTCAACGATTTTCACTAAGCAAAGAATTCTGTACAGTTCCGTCGTGATCCATTACACACCAGCCTCTACACCACTGAAACATCAACCCATCTGGTTGCTGGTTCATGTTTTTTGCTGTAAATTATGATCTTTATTTCCATCATGCATTGATGGGACTGTACATAGAGATATGCACTTGAACATGGCCAAACCTTTCATATACATATATATACATGCATCATATAAAGCCACTTTAAGCCATATGGGACAACATGTATTAAATTGTATTTCACATACAGGGCAATTCATGCCATTGCTATAGAGGTGTATGTCTGGATGAGCATAGTATATTTATTAATACATAATTTATTTTAAGCTTTTGTATTCACATGTGACTTCAGGGCAGATTCATGACTTTGCTTACATTTCTTTACTGAGAAGAAATTTGAAGGACTGTACAATACTTTTCTTGCTTGAGAAGGAATGGACAGATGAAATTGTGAATTGAGAG

mRNA sequence

TTTCATGTATTTTTTCTAAGAAGAAACGATGGTCTCTTGACAATTTTCCAACTCGGGACCCGACCCGCCAAGAAATATCCATTCGAAACTCGTCGACGGAGAGGAGATATTTTCTTGAACTTTTTTTGTTCGAGTAAGCAAAAGGAAACTTGTTGATTTTCCAAATTCTTAAAAAAAGGGATTAAGAATTGGTGGTAGAGAATTTGCAGTTTCGACGTCCACATTTTTCACTCATCAGATTGCATATGACTAATTTACTACTACTTCACCACCAAGCTTCTGCCTCTCCCTGGCTCCAATTTTCATGATGGGAACATGTTTTAGGCCAAATCTCAAGTGGGGTTTTCAAATTCAGACTCATTCCCTCAAGAATTCCCCTTCCAAGCTTTCCCCATATGCCTATGATGAACATCCCGCCAAAATCTTGCTCCGGAACGCTAAAGGCAGGGAAGCCGCCTTTAATTCAGGAAGACTTTCCTTCTTCTCAAGTATTTGTGAAGAAGGAGAATCTATACCTAGAGAAACCTTGAAAACATACACTTGCTTGTCTGAAGCTCCACAAACCTCGCCCGATGATCTGTTAAATTTGGAAGAGATTGAGATGAACAGTGGGGCAAAGTCACTTAGTTCTTTGCATTATGGGATTAAAAGTACCAGGCCGTCCAAGGTAGAGGACAATTTTTCTTCCCCTACGAGCATGCCTACTGGCAAGGCGTCACCTTTTGGCATCTTAATGGAAAACCTTGATGTTTTGGAGGAAACTTTTGCTGAATCAGGCATGCTCAGCTTGGAAAGAGATATTGTGCTGCAACTAACGAAACTTGGAGCTTTGGAGTTTTTTAATACCTGTCTATCTAGGACTCTTAAAACTTCAAGTTTTCATGATTTGTCAGACTTACCCGTTGAGGATGGTGAAGATCATAATGTAAACCAGAAAACTAATGACCAGAATTGCGATGTCACAGTTTACTCTGGAAAAAGAGCAGGAAGAAGATCAGTAAAAAAGAGAGCAATGGATAATGCTGATAAAGTTGCTTCCAGGCCGCTGGCTACAAGAGCTGTTAAAGAAAAAATCCACAGTTCGACTATATTTTCGAGAAAAAAATCATCTAATTCTAGTAAAAGAAGACTGGTTGTTGCAAGAAATGAAGCTGAAATGTCCACAGGGATTAAGGTAGTTGCAAATTTAGAAAGAATTAGAGAAACCTTAGAAAAGGAATCTGGAAGAATAGCAAGCATGAGTTGTTGGGCCGAAGCTGCCAGCGTTGATATAAAAGACCTGCAGAAACAGTTACAATTTGGTTGGTTCTGCCGGGATGAGCTTTTAAGGAGCACTAATTCATTAGTTCTGTTCCTTGCAAAGAAATACCGATGCTCTGGGTTACCAATGGAGGACTTGGTTCAGGCAGGAGCCCTTGGTGTGCTGCAAGGTGTTGAAAGGTTTGACCCTAAAAGGGGTTTTAGATTCTCAACGTATATTCAATACTGGATAAGGAAATCAATGTCAAGAGTTGTGGCACGAAATTCAAGGGGAATTCAAATTCCATGGTCATTAACCAAGGCAATAAATCAGATACAAAAAGCGCGAAAAGTGTTGAACCAAGGTGGTAGGAGATATTCCGACGACGATATAGCAAGGGCTACTGGACTTCCTCTAGCCAAGGTTAGAGTTGCCAGCAACTGTTTAAAAGTTGTGGGTTCGGTTGATCAGAAGATGGGTGATGGACTAAATATGAAATATATGGAATTTACAGCTGATACGTCAATACAGAGCCCAGAAGAGACTGTGAAGCGAAAACTGATGAAGAAAGACATCTTTAATATTCTTCAAGGGTTGGAATCAAGGGAGAGGCAGGTCCTGGTGCTGCGTTACGGACTTATGGATTTCCAGCCCAAGTCGCTGGAGGAAATTGGAAAACTTCTGCACGTAAGCAAGGAATGGGTTCGAAAAATAGAAAAGAAAGCCATGACAAAGCTGAAGAATGAAGAGACTGTGAAGAACTTGAGCCATTACTTGGATTGATCTACTTCTTTCAAGCATGAGAACCTCCAGTCTTTCAAAATTTGCAGCCGGGCGAAGAAGCCAAGGGGTTCGCATTGTGCTTTCGGGCCACACTAACAAAATTGGTTACAATGAGCATATCTCAATCCTCAACGATTTTCACTAAGCAAAGAATTCTGTACAGTTCCGTCGTGATCCATTACACACCAGCCTCTACACCACTGAAACATCAACCCATCTGGTTGCTGGTTCATGTTTTTTGCTGTAAATTATGATCTTTATTTCCATCATGCATTGATGGGACTGTACATAGAGATATGCACTTGAACATGGCCAAACCTTTCATATACATATATATACATGCATCATATAAAGCCACTTTAAGCCATATGGGACAACATGTATTAAATTGTATTTCACATACAGGGCAATTCATGCCATTGCTATAGAGGTGTATGTCTGGATGAGCATAGTATATTTATTAATACATAATTTATTTTAAGCTTTTGTATTCACATGTGACTTCAGGGCAGATTCATGACTTTGCTTACATTTCTTTACTGAGAAGAAATTTGAAGGACTGTACAATACTTTTCTTGCTTGAGAAGGAATGGACAGATGAAATTGTGAATTGAGAG

Coding sequence (CDS)

ATGATGGGAACATGTTTTAGGCCAAATCTCAAGTGGGGTTTTCAAATTCAGACTCATTCCCTCAAGAATTCCCCTTCCAAGCTTTCCCCATATGCCTATGATGAACATCCCGCCAAAATCTTGCTCCGGAACGCTAAAGGCAGGGAAGCCGCCTTTAATTCAGGAAGACTTTCCTTCTTCTCAAGTATTTGTGAAGAAGGAGAATCTATACCTAGAGAAACCTTGAAAACATACACTTGCTTGTCTGAAGCTCCACAAACCTCGCCCGATGATCTGTTAAATTTGGAAGAGATTGAGATGAACAGTGGGGCAAAGTCACTTAGTTCTTTGCATTATGGGATTAAAAGTACCAGGCCGTCCAAGGTAGAGGACAATTTTTCTTCCCCTACGAGCATGCCTACTGGCAAGGCGTCACCTTTTGGCATCTTAATGGAAAACCTTGATGTTTTGGAGGAAACTTTTGCTGAATCAGGCATGCTCAGCTTGGAAAGAGATATTGTGCTGCAACTAACGAAACTTGGAGCTTTGGAGTTTTTTAATACCTGTCTATCTAGGACTCTTAAAACTTCAAGTTTTCATGATTTGTCAGACTTACCCGTTGAGGATGGTGAAGATCATAATGTAAACCAGAAAACTAATGACCAGAATTGCGATGTCACAGTTTACTCTGGAAAAAGAGCAGGAAGAAGATCAGTAAAAAAGAGAGCAATGGATAATGCTGATAAAGTTGCTTCCAGGCCGCTGGCTACAAGAGCTGTTAAAGAAAAAATCCACAGTTCGACTATATTTTCGAGAAAAAAATCATCTAATTCTAGTAAAAGAAGACTGGTTGTTGCAAGAAATGAAGCTGAAATGTCCACAGGGATTAAGGTAGTTGCAAATTTAGAAAGAATTAGAGAAACCTTAGAAAAGGAATCTGGAAGAATAGCAAGCATGAGTTGTTGGGCCGAAGCTGCCAGCGTTGATATAAAAGACCTGCAGAAACAGTTACAATTTGGTTGGTTCTGCCGGGATGAGCTTTTAAGGAGCACTAATTCATTAGTTCTGTTCCTTGCAAAGAAATACCGATGCTCTGGGTTACCAATGGAGGACTTGGTTCAGGCAGGAGCCCTTGGTGTGCTGCAAGGTGTTGAAAGGTTTGACCCTAAAAGGGGTTTTAGATTCTCAACGTATATTCAATACTGGATAAGGAAATCAATGTCAAGAGTTGTGGCACGAAATTCAAGGGGAATTCAAATTCCATGGTCATTAACCAAGGCAATAAATCAGATACAAAAAGCGCGAAAAGTGTTGAACCAAGGTGGTAGGAGATATTCCGACGACGATATAGCAAGGGCTACTGGACTTCCTCTAGCCAAGGTTAGAGTTGCCAGCAACTGTTTAAAAGTTGTGGGTTCGGTTGATCAGAAGATGGGTGATGGACTAAATATGAAATATATGGAATTTACAGCTGATACGTCAATACAGAGCCCAGAAGAGACTGTGAAGCGAAAACTGATGAAGAAAGACATCTTTAATATTCTTCAAGGGTTGGAATCAAGGGAGAGGCAGGTCCTGGTGCTGCGTTACGGACTTATGGATTTCCAGCCCAAGTCGCTGGAGGAAATTGGAAAACTTCTGCACGTAAGCAAGGAATGGGTTCGAAAAATAGAAAAGAAAGCCATGACAAAGCTGAAGAATGAAGAGACTGTGAAGAACTTGAGCCATTACTTGGATTGA

Protein sequence

MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD
Homology
[Close]
BLAST of MELO3C011121 vs. NCBI nr
Match: XP_008444981.1 (PREDICTED: RNA polymerase sigma factor sigC [Cucumis melo])

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 559/572 (97.73%), Postives = 560/572 (97.90%), Query Frame = 0 

Query: 1   MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFF 60
           MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYA            +KGREAAFNSGRLSFF
Sbjct: 1   MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYA------------SKGREAAFNSGRLSFF 60

Query: 61  SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS 120
           SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS
Sbjct: 61  SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS 120

Query: 121 KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN 180
           KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN
Sbjct: 121 KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN 180

Query: 181 TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 240
           TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA
Sbjct: 181 TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 240

Query: 241 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 300
           DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE
Sbjct: 241 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 300

Query: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 360
           TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL
Sbjct: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 360

Query: 361 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 420
           PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA
Sbjct: 361 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 420

Query: 421 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 480
           INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM
Sbjct: 421 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 480

Query: 481 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 540
           EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL
Sbjct: 481 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 540

Query: 541 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD
Sbjct: 541 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 560

[Close]
BLAST of MELO3C011121 vs. NCBI nr
Match: KAA0065060.1 (RNA polymerase sigma factor sigC [Cucumis melo var. makuwa])

HSP 1 Score: 1017.3 bits (2629), Expect = 5.2e-293
Identity = 527/528 (99.81%), Postives = 528/528 (100.00%), Query Frame = 0 

Query: 45  AKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGA 104
           AKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGA
Sbjct: 11  AKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGA 70

Query: 105 KSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLER 164
           KSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLER
Sbjct: 71  KSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLER 130

Query: 165 DIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSG 224
           DIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSG
Sbjct: 131 DIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSG 190

Query: 225 KRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAE 284
           KRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAE
Sbjct: 191 KRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAE 250

Query: 285 MSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRST 344
           MSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRST
Sbjct: 251 MSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRST 310

Query: 345 NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVV 404
           NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVV
Sbjct: 311 NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVV 370

Query: 405 ARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVV 464
           ARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVV
Sbjct: 371 ARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVV 430

Query: 465 GSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYG 524
           GSVDQKMGDGLNMKYMEFTADTSIQSPEETVKR+LMKKDIFNILQGLESRERQVLVLRYG
Sbjct: 431 GSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRELMKKDIFNILQGLESRERQVLVLRYG 490

Query: 525 LMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           LMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD
Sbjct: 491 LMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 538

[Close]
BLAST of MELO3C011121 vs. NCBI nr
Match: XP_004148429.2 (RNA polymerase sigma factor sigC isoform X1 [Cucumis sativus])

HSP 1 Score: 993.0 bits (2566), Expect = 1.0e-285
Identity = 518/572 (90.56%), Postives = 537/572 (93.88%), Query Frame = 0 

Query: 1   MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFF 60
           MMGT FRPNL+WGFQIQTHSLKNSPSKLSP+A            +KGREAAFNSGRLSFF
Sbjct: 1   MMGTSFRPNLRWGFQIQTHSLKNSPSKLSPHA------------SKGREAAFNSGRLSFF 60

Query: 61  SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS 120
           SSICEEGESIPRETLKTYTCLSEAPQTS +DLLNLEEIEMNSGAKSL  +HYGIKSTRPS
Sbjct: 61  SSICEEGESIPRETLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPS 120

Query: 121 KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN 180
           KVEDNFSS TS+PTGKASPFGILMENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFN
Sbjct: 121 KVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFN 180

Query: 181 TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 240
           TCLSRTLKTSSFHD S LP+E GEDHNVNQKTNDQN +VTVYS K+AGRRSVKKRAMDNA
Sbjct: 181 TCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNA 240

Query: 241 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 300
           DK+ASR L TRAVKEKIH ST+FSRKKSSNSSKRRL+VA NEAEMSTG+KVVANLERIRE
Sbjct: 241 DKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRE 300

Query: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 360
           TLEKESGRIASMSCWAEAASVDIKDLQKQLQFG FCRDELLRSTNSLV+FLAKKYRCSGL
Sbjct: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGL 360

Query: 361 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 420
           PMEDLVQAGALGVLQGVERFDPKRGFR STYIQYWIRKSMSRVVARNSRGIQIP SLTKA
Sbjct: 361 PMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKA 420

Query: 421 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 480
           INQIQKARKVLN  GRRYSDDDIARATGLPLAKVRVASNCLKVVGS DQKMGDG+NMKYM
Sbjct: 421 INQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYM 480

Query: 481 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 540
           EFTAD SIQSPEETVKRKLMKKDIFNILQ LESRERQVLVLRYGL+DF+PKSLEEIGKLL
Sbjct: 481 EFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLL 540

Query: 541 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           H+SKEWVRKIEKKAMTKLKNEETVK+LSHYLD
Sbjct: 541 HISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 560

[Close]
BLAST of MELO3C011121 vs. NCBI nr
Match: XP_038884658.1 (RNA polymerase sigma factor sigC isoform X1 [Benincasa hispida])

HSP 1 Score: 969.9 bits (2506), Expect = 9.4e-279
Identity = 502/576 (87.15%), Postives = 530/576 (92.01%), Query Frame = 0 

Query: 1   MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFF 60
           MMGT FRPNLKWGFQIQTHS K SPSKL PYA            +KGREAAFNSGRLSFF
Sbjct: 1   MMGTSFRPNLKWGFQIQTHSRKTSPSKLFPYA------------SKGREAAFNSGRLSFF 60

Query: 61  SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS 120
           SSI EEGESI RETLKTYTCLSEAPQTS DDLLNLEEIEMN GAKSLS LHYGIK+T PS
Sbjct: 61  SSIWEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNGGAKSLSPLHYGIKNTAPS 120

Query: 121 KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN 180
           KVEDNFSS TS P+GKASPFG+LMENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFN
Sbjct: 121 KVEDNFSSCTSFPSGKASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFN 180

Query: 181 TCLSRTLKTSSFHDLSDLPV----EDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRA 240
           TCLSRTLKTSSFHDLSDLP+    ED  DHNVNQKT D+N D+ VYSGKRA RRSVKKRA
Sbjct: 181 TCLSRTLKTSSFHDLSDLPIEQPTEDDGDHNVNQKTTDENDDIIVYSGKRAVRRSVKKRA 240

Query: 241 MDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLE 300
           MD+ADKV S+PLATRA KEKIHSS I SRKK+SNS KRRL++ARNEAEMSTG+KVVANLE
Sbjct: 241 MDSADKVYSQPLATRAAKEKIHSSAIISRKKASNSRKRRLIIARNEAEMSTGVKVVANLE 300

Query: 301 RIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYR 360
           RIRETLEKESGR+ SMSCWA AA VDIKDL+KQLQFGWFC+DELLRSTNSL+LFLA+KYR
Sbjct: 301 RIRETLEKESGRMVSMSCWANAAGVDIKDLKKQLQFGWFCQDELLRSTNSLILFLARKYR 360

Query: 361 CSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWS 420
           CSGLPMEDLVQAG+LGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARN+RGIQIPWS
Sbjct: 361 CSGLPMEDLVQAGSLGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNARGIQIPWS 420

Query: 421 LTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLN 480
           LTKAINQIQKARKVLN GGRRYSDDDIA+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLN
Sbjct: 421 LTKAINQIQKARKVLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLN 480

Query: 481 MKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEI 540
           MKYMEFTAD SIQSPEETVK+KLMKKDIFN+L+GLESRERQVLVLRYGL+DFQPKSLEEI
Sbjct: 481 MKYMEFTADMSIQSPEETVKQKLMKKDIFNVLEGLESRERQVLVLRYGLVDFQPKSLEEI 540

Query: 541 GKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           GKLLHVSKEWVRKIEKKAMTKL++EETV+N SHYLD
Sbjct: 541 GKLLHVSKEWVRKIEKKAMTKLRSEETVRNFSHYLD 564

[Close]
BLAST of MELO3C011121 vs. NCBI nr
Match: XP_022996944.1 (RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 921.8 bits (2381), Expect = 2.9e-264
Identity = 480/572 (83.92%), Postives = 517/572 (90.38%), Query Frame = 0 

Query: 2   MGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFFS 61
           MGT FRPNLKW FQIQTHS + SPSKLSPYA            +KGREA+FNSGRLSFFS
Sbjct: 1   MGTSFRPNLKWAFQIQTHSRRASPSKLSPYA------------SKGREASFNSGRLSFFS 60

Query: 62  SICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPSK 121
           S CEEGE+I RE LKTYTCLSEAPQT  D LL+LEE E+NSGAKSLS LHYG K++ PSK
Sbjct: 61  STCEEGEAISREALKTYTCLSEAPQTLADGLLDLEEKEINSGAKSLSHLHYGSKNSGPSK 120

Query: 122 VEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFNT 181
           VEDNF S TS+PTG+ASPF +LMENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFN 
Sbjct: 121 VEDNFCSCTSLPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNA 180

Query: 182 CLSRTLK-TSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 241
           CLSRTLK +SSF DLSDLP+E G DHNVNQKT+DQN ++ VYSGKRAGRRSVK+RAMDNA
Sbjct: 181 CLSRTLKASSSFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMDNA 240

Query: 242 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 301
           DKVASRPLATRA KEK  S    SRKK+SNS KRR +VARNEAEMSTG+KVVANLERIRE
Sbjct: 241 DKVASRPLATRAAKEKFRS----SRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRE 300

Query: 302 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 361
           TLEKESGR ASMSCWA+A+S+DIKDLQKQLQFGWFC+DELLRSTNSLV+FLAKKYRCSGL
Sbjct: 301 TLEKESGRTASMSCWADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGL 360

Query: 362 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 421
           PMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRGIQIPWSLTKA
Sbjct: 361 PMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKA 420

Query: 422 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 481
           INQIQKARK LN  GRRYSDDD+A+ATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMKYM
Sbjct: 421 INQIQKARKALNNSGRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYM 480

Query: 482 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 541
           E TADTSI+SPE+TVKR+LMKKDIFN+L+ LESRERQVLVLRYGLMD QPKSLEEIGKLL
Sbjct: 481 ELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLL 540

Query: 542 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
            VSKEWVRKIE+KA TKLKNEETV+NLSHYLD
Sbjct: 541 RVSKEWVRKIERKATTKLKNEETVRNLSHYLD 556

[Close]
BLAST of MELO3C011121 vs. ExPASy Swiss-Prot
Match: O24621 (RNA polymerase sigma factor sigC OS=Arabidopsis thaliana OX=3702 GN=SIGC PE=2 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 7.6e-114
Identity = 241/526 (45.82%), Postives = 344/526 (65.40%), Query Frame = 0 

Query: 56  RLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDL-LNLEEIEMNSGAKSLSSLHYGI 115
           R SF SS+ EE      ++LK   C S +P T+ +++ + L++ + N G  S        
Sbjct: 84  RWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNVYVELKDPKENIGVGS-------- 143

Query: 116 KSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLG 175
                   E ++SS + +       + +L +NL  LEETF     + +ERDI+LQ+ KLG
Sbjct: 144 -------AERSYSSRSML------QYNLLAKNLLALEETFVALDSVRMERDIMLQMGKLG 203

Query: 176 ALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKK 235
           A E F TCLSR   +S    LSD    +  D   NQ+       V V S     RR VKK
Sbjct: 204 AAELFKTCLSRYRGSSITSCLSD--TTELVDTTPNQQ-------VFVSS-----RRKVKK 263

Query: 236 RA------MDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTG 295
           +A       +N D+ +S P+  R     I    +   ++     K+R  ++RNE EMSTG
Sbjct: 264 KARRSSVTAENGDQ-SSLPIGLRTTWNNIDVPRV---RRPPKYRKKRERISRNETEMSTG 323

Query: 296 IKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLV 355
           +K+VA++ERIR  LE+ESG++AS+SCWA AA ++ K L + L +GW+CRDEL++ST SLV
Sbjct: 324 VKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLV 383

Query: 356 LFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNS 415
           LFLA+ YR  G+  EDL+QAG +GVLQG ERFD  RG++FSTY+QYWIRKSMS +V+R++
Sbjct: 384 LFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHA 443

Query: 416 RGIQIPWSLTKAINQIQKARKVL--NQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGS 475
           RG+ IP S+ + IN IQKARK L  + G +  +D++IA+ TG  + K+R A+ CLKVVGS
Sbjct: 444 RGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGS 503

Query: 476 VDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLM 535
           +D+K+GD    K++EFT DT+++SPEE V R+  ++DI ++L+GLE RE+QV+VLRYGL 
Sbjct: 504 IDKKVGDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQ 563

Query: 536 DFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           D++PKSLEEIGKLL VSKEW+RKIE++AM KL+++   ++L +YL+
Sbjct: 564 DYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLRDQPNAEDLRYYLN 570

[Close]
BLAST of MELO3C011121 vs. ExPASy Swiss-Prot
Match: O22056 (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 1.8e-54
Identity = 128/394 (32.49%), Postives = 236/394 (59.90%), Query Frame = 0 

Query: 186 TLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDN------ 245
           T   S+   + DL  E  E+  V       +  + V S ++  R++ + + ++       
Sbjct: 179 TASASNKESIGDLESEKQEE--VELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIP 238

Query: 246 ADKVASRPLATRAVKEKI-HSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERI 305
           + K  S P   R V +++ H+  +   + +++SSK  L+  R E E+S GI+ +  LER+
Sbjct: 239 SVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK--LLTVREEHELSAGIQDLLKLERL 298

Query: 306 RETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCS 365
           +  L + SGR  + + WA AA VD K L++++  G  C+D++++S   LV+ +AK Y+ +
Sbjct: 299 QTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGA 358

Query: 366 GLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLT 425
           G+ ++DLVQ G  G+++G E+FD  +GF+FSTY  +WI++++ + ++  SR I++P+ + 
Sbjct: 359 GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMV 418

Query: 426 KAINQIQKARKVL-NQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNM 485
           +A  ++++ARK L ++ G+   +++IA ATGL + ++       K   S+DQK+G   N+
Sbjct: 419 EATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNL 478

Query: 486 KYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIG 545
           K  E  AD    + E+ + ++ M++D+  +L  L +RE+QV+  R+G+ D + K+L+EIG
Sbjct: 479 KPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIG 538

Query: 546 KLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYL 572
           +++ VS+E VR+IE  A  KLKN++   +L  YL
Sbjct: 539 EMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568

[Close]
BLAST of MELO3C011121 vs. ExPASy Swiss-Prot
Match: P26683 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigA PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.4e-45
Identity = 110/335 (32.84%), Postives = 199/335 (59.40%), Query Frame = 0 

Query: 238 DNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLER 297
           D+A    +     R   +K H +    R       + RL+ A  E E++  I  +  LER
Sbjct: 56  DDAKSGKAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELER 115

Query: 298 IRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRC 357
           +RE L ++  R    S WAEA  + +   + +L  G   +D++++S   LV+ +AKKY  
Sbjct: 116 VRERLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMN 175

Query: 358 SGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSL 417
            GL  +DL+Q G+LG+++  E+FD ++G++FSTY  +WIR++++R +A  SR I++P  L
Sbjct: 176 RGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHL 235

Query: 418 TKAINQIQKARKVLNQG-GRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLN 477
            + I++I+K  K+L+Q  GR+ ++++IA    + + K+R  +   ++  S++  +G   +
Sbjct: 236 YETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEED 295

Query: 478 MKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEI 537
            +  +F  ++  ++PE+ V + L+++D+  +L  L  RER VL LRYGL D + K+LEEI
Sbjct: 296 SRLGDF-IESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEI 355

Query: 538 GKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYL 572
           G++ +V++E +R+IE KA+ KL++      L  Y+
Sbjct: 356 GQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEYI 389

[Close]
BLAST of MELO3C011121 vs. ExPASy Swiss-Prot
Match: P38023 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=sigA1 PE=3 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 9.8e-45
Identity = 112/339 (33.04%), Postives = 202/339 (59.59%), Query Frame = 0 

Query: 236 AMDNADKVASRPLATRAVKEKIHSSTIFS--RKKSSNSSKRRLVVARNEAEMSTGIKVVA 295
           A+D+ D V     A    K K+  +      R       + RL+ A  E E++  I  + 
Sbjct: 61  AIDDEDSVGEDEDAAAKAKAKVRKTYTEDSIRLYLQEIGRIRLLRADEEIELARQIADLL 120

Query: 296 NLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAK 355
            LERIR+ L ++  R+ S + WA A    + + +++L  G   +D++++S   LV+ +AK
Sbjct: 121 ALERIRDELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAK 180

Query: 356 KYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQI 415
           KY   GL  +DL+Q G+LG+++  E+FD ++G++FSTY  +WIR++++R +A  SR I++
Sbjct: 181 KYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRL 240

Query: 416 PWSLTKAINQIQKARKVLNQG-GRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMG 475
           P  L + I++I+K  K+L+Q  GR+ ++++IA    + + K+R  +   ++  S++  +G
Sbjct: 241 PVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIG 300

Query: 476 DGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKS 535
              + +  +F  +   ++PE+ V + L+++D+  +L  L  RER VL LRYGL D + K+
Sbjct: 301 KEEDSRLGDF-IEADGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKT 360

Query: 536 LEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYL 572
           LEEIG+L +V++E +R+IE KA+ KL++      L  Y+
Sbjct: 361 LEEIGQLFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 398

[Close]
BLAST of MELO3C011121 vs. ExPASy Swiss-Prot
Match: Q03066 (RNA polymerase sigma-C factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigC PE=3 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 1.7e-41
Identity = 95/259 (36.68%), Postives = 164/259 (63.32%), Query Frame = 0 

Query: 315 WAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVL 374
           WAE A + +++L+K    G   ++ ++++   LV+ +AKKY+  GL + DLVQ G LG+ 
Sbjct: 156 WAEIAKMTVEELEKMQSQGLQSKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLE 215

Query: 375 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKA-RKVLNQ 434
           + VE+FDP +G+RFSTY  +WIR+ ++R +A +SR I++P  +T+ +N+I+KA RK+  +
Sbjct: 216 RAVEKFDPTKGYRFSTYAYWWIRQGITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQE 275

Query: 435 GGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADTSIQSPEE 494
            GR  + +D+A    +   +VR     +    S++ K+G   + +  E   +T   +PEE
Sbjct: 276 KGRTPTLEDLAIELDMTPTQVREVLLRVPRSVSLETKVGKDKDTELGEL-LETDGVTPEE 335

Query: 495 TVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKK 554
            + R+ +++D+ ++L  L SRER V+++R+GL D  P SL EIG+ L +S+E VR+IE K
Sbjct: 336 MLMRESLQRDLQHLLADLTSRERDVILMRFGLADGHPYSLAEIGRALDLSRERVRQIESK 395

Query: 555 AMTKLKNEETVKNLSHYLD 573
           A+ KL+  +    +  YL+
Sbjct: 396 ALQKLRQPKRRNLIRDYLE 413

[Close]
BLAST of MELO3C011121 vs. ExPASy TrEMBL
Match: A0A1S3BBM8 (RNA polymerase sigma factor sigC OS=Cucumis melo OX=3656 GN=LOC103488161 PE=3 SV=1)

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 559/572 (97.73%), Postives = 560/572 (97.90%), Query Frame = 0 

Query: 1   MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFF 60
           MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYA            +KGREAAFNSGRLSFF
Sbjct: 1   MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYA------------SKGREAAFNSGRLSFF 60

Query: 61  SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS 120
           SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS
Sbjct: 61  SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS 120

Query: 121 KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN 180
           KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN
Sbjct: 121 KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN 180

Query: 181 TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 240
           TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA
Sbjct: 181 TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 240

Query: 241 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 300
           DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE
Sbjct: 241 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 300

Query: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 360
           TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL
Sbjct: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 360

Query: 361 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 420
           PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA
Sbjct: 361 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 420

Query: 421 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 480
           INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM
Sbjct: 421 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 480

Query: 481 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 540
           EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL
Sbjct: 481 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 540

Query: 541 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD
Sbjct: 541 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 560

[Close]
BLAST of MELO3C011121 vs. ExPASy TrEMBL
Match: A0A5A7VCX9 (RNA polymerase sigma factor sigC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003890 PE=3 SV=1)

HSP 1 Score: 1017.3 bits (2629), Expect = 2.5e-293
Identity = 527/528 (99.81%), Postives = 528/528 (100.00%), Query Frame = 0 

Query: 45  AKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGA 104
           AKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGA
Sbjct: 11  AKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGA 70

Query: 105 KSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLER 164
           KSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLER
Sbjct: 71  KSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLER 130

Query: 165 DIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSG 224
           DIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSG
Sbjct: 131 DIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSG 190

Query: 225 KRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAE 284
           KRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAE
Sbjct: 191 KRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAE 250

Query: 285 MSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRST 344
           MSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRST
Sbjct: 251 MSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRST 310

Query: 345 NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVV 404
           NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVV
Sbjct: 311 NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVV 370

Query: 405 ARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVV 464
           ARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVV
Sbjct: 371 ARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVV 430

Query: 465 GSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYG 524
           GSVDQKMGDGLNMKYMEFTADTSIQSPEETVKR+LMKKDIFNILQGLESRERQVLVLRYG
Sbjct: 431 GSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRELMKKDIFNILQGLESRERQVLVLRYG 490

Query: 525 LMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           LMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD
Sbjct: 491 LMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 538

[Close]
BLAST of MELO3C011121 vs. ExPASy TrEMBL
Match: A0A0A0LLW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372830 PE=3 SV=1)

HSP 1 Score: 993.0 bits (2566), Expect = 5.0e-286
Identity = 518/572 (90.56%), Postives = 537/572 (93.88%), Query Frame = 0 

Query: 1   MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFF 60
           MMGT FRPNL+WGFQIQTHSLKNSPSKLSP+A            +KGREAAFNSGRLSFF
Sbjct: 1   MMGTSFRPNLRWGFQIQTHSLKNSPSKLSPHA------------SKGREAAFNSGRLSFF 60

Query: 61  SSICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPS 120
           SSICEEGESIPRETLKTYTCLSEAPQTS +DLLNLEEIEMNSGAKSL  +HYGIKSTRPS
Sbjct: 61  SSICEEGESIPRETLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPS 120

Query: 121 KVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFN 180
           KVEDNFSS TS+PTGKASPFGILMENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFN
Sbjct: 121 KVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFN 180

Query: 181 TCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 240
           TCLSRTLKTSSFHD S LP+E GEDHNVNQKTNDQN +VTVYS K+AGRRSVKKRAMDNA
Sbjct: 181 TCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNA 240

Query: 241 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 300
           DK+ASR L TRAVKEKIH ST+FSRKKSSNSSKRRL+VA NEAEMSTG+KVVANLERIRE
Sbjct: 241 DKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRE 300

Query: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 360
           TLEKESGRIASMSCWAEAASVDIKDLQKQLQFG FCRDELLRSTNSLV+FLAKKYRCSGL
Sbjct: 301 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGL 360

Query: 361 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 420
           PMEDLVQAGALGVLQGVERFDPKRGFR STYIQYWIRKSMSRVVARNSRGIQIP SLTKA
Sbjct: 361 PMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKA 420

Query: 421 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 480
           INQIQKARKVLN  GRRYSDDDIARATGLPLAKVRVASNCLKVVGS DQKMGDG+NMKYM
Sbjct: 421 INQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYM 480

Query: 481 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 540
           EFTAD SIQSPEETVKRKLMKKDIFNILQ LESRERQVLVLRYGL+DF+PKSLEEIGKLL
Sbjct: 481 EFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLL 540

Query: 541 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           H+SKEWVRKIEKKAMTKLKNEETVK+LSHYLD
Sbjct: 541 HISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 560

[Close]
BLAST of MELO3C011121 vs. ExPASy TrEMBL
Match: A0A6J1KA34 (RNA polymerase sigma factor sigC-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492024 PE=3 SV=1)

HSP 1 Score: 921.8 bits (2381), Expect = 1.4e-264
Identity = 480/572 (83.92%), Postives = 517/572 (90.38%), Query Frame = 0 

Query: 2   MGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFFS 61
           MGT FRPNLKW FQIQTHS + SPSKLSPYA            +KGREA+FNSGRLSFFS
Sbjct: 1   MGTSFRPNLKWAFQIQTHSRRASPSKLSPYA------------SKGREASFNSGRLSFFS 60

Query: 62  SICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPSK 121
           S CEEGE+I RE LKTYTCLSEAPQT  D LL+LEE E+NSGAKSLS LHYG K++ PSK
Sbjct: 61  STCEEGEAISREALKTYTCLSEAPQTLADGLLDLEEKEINSGAKSLSHLHYGSKNSGPSK 120

Query: 122 VEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFNT 181
           VEDNF S TS+PTG+ASPF +LMENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFN 
Sbjct: 121 VEDNFCSCTSLPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNA 180

Query: 182 CLSRTLK-TSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNA 241
           CLSRTLK +SSF DLSDLP+E G DHNVNQKT+DQN ++ VYSGKRAGRRSVK+RAMDNA
Sbjct: 181 CLSRTLKASSSFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMDNA 240

Query: 242 DKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRE 301
           DKVASRPLATRA KEK  S    SRKK+SNS KRR +VARNEAEMSTG+KVVANLERIRE
Sbjct: 241 DKVASRPLATRAAKEKFRS----SRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRE 300

Query: 302 TLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGL 361
           TLEKESGR ASMSCWA+A+S+DIKDLQKQLQFGWFC+DELLRSTNSLV+FLAKKYRCSGL
Sbjct: 301 TLEKESGRTASMSCWADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGL 360

Query: 362 PMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA 421
           PMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRGIQIPWSLTKA
Sbjct: 361 PMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKA 420

Query: 422 INQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYM 481
           INQIQKARK LN  GRRYSDDD+A+ATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMKYM
Sbjct: 421 INQIQKARKALNNSGRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYM 480

Query: 482 EFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLL 541
           E TADTSI+SPE+TVKR+LMKKDIFN+L+ LESRERQVLVLRYGLMD QPKSLEEIGKLL
Sbjct: 481 ELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLL 540

Query: 542 HVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
            VSKEWVRKIE+KA TKLKNEETV+NLSHYLD
Sbjct: 541 RVSKEWVRKIERKATTKLKNEETVRNLSHYLD 556

[Close]
BLAST of MELO3C011121 vs. ExPASy TrEMBL
Match: A0A6J1KCF5 (RNA polymerase sigma factor sigC-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492024 PE=3 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 9.2e-264
Identity = 480/574 (83.62%), Postives = 518/574 (90.24%), Query Frame = 0 

Query: 2   MGTCFRPNLKWGFQIQTHSLKNSPSKLSPYAYDEHPAKILLRNAKGREAAFNSGRLSFFS 61
           MGT FRPNLKW FQIQTHS + SPSKLSPYA            +KGREA+FNSGRLSFFS
Sbjct: 1   MGTSFRPNLKWAFQIQTHSRRASPSKLSPYA------------SKGREASFNSGRLSFFS 60

Query: 62  SICEEGESIPRETLKTYTCLSEAPQTSPDDLLNLE--EIEMNSGAKSLSSLHYGIKSTRP 121
           S CEEGE+I RE LKTYTCLSEAPQT  D LL+LE  E+E+NSGAKSLS LHYG K++ P
Sbjct: 61  STCEEGEAISREALKTYTCLSEAPQTLADGLLDLEEKEVEINSGAKSLSHLHYGSKNSGP 120

Query: 122 SKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFF 181
           SKVEDNF S TS+PTG+ASPF +LMENLDVLEETF ESGMLSLERDIVLQLTKLGALEFF
Sbjct: 121 SKVEDNFCSCTSLPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFF 180

Query: 182 NTCLSRTLK-TSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMD 241
           N CLSRTLK +SSF DLSDLP+E G DHNVNQKT+DQN ++ VYSGKRAGRRSVK+RAMD
Sbjct: 181 NACLSRTLKASSSFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMD 240

Query: 242 NADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERI 301
           NADKVASRPLATRA KEK  S    SRKK+SNS KRR +VARNEAEMSTG+KVVANLERI
Sbjct: 241 NADKVASRPLATRAAKEKFRS----SRKKASNSKKRRSIVARNEAEMSTGVKVVANLERI 300

Query: 302 RETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCS 361
           RETLEKESGR ASMSCWA+A+S+DIKDLQKQLQFGWFC+DELLRSTNSLV+FLAKKYRCS
Sbjct: 301 RETLEKESGRTASMSCWADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCS 360

Query: 362 GLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLT 421
           GLPMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRGIQIPWSLT
Sbjct: 361 GLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLT 420

Query: 422 KAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMK 481
           KAINQIQKARK LN  GRRYSDDD+A+ATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMK
Sbjct: 421 KAINQIQKARKALNNSGRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMK 480

Query: 482 YMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGK 541
           YME TADTSI+SPE+TVKR+LMKKDIFN+L+ LESRERQVLVLRYGLMD QPKSLEEIGK
Sbjct: 481 YMELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGK 540

Query: 542 LLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           LL VSKEWVRKIE+KA TKLKNEETV+NLSHYLD
Sbjct: 541 LLRVSKEWVRKIERKATTKLKNEETVRNLSHYLD 558

[Close]
BLAST of MELO3C011121 vs. TAIR 10
Match: AT3G53920.1 (RNApolymerase sigma-subunit C )

HSP 1 Score: 412.5 bits (1059), Expect = 5.4e-115
Identity = 241/526 (45.82%), Postives = 344/526 (65.40%), Query Frame = 0 

Query: 56  RLSFFSSICEEGESIPRETLKTYTCLSEAPQTSPDDL-LNLEEIEMNSGAKSLSSLHYGI 115
           R SF SS+ EE      ++LK   C S +P T+ +++ + L++ + N G  S        
Sbjct: 84  RWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNVYVELKDPKENIGVGS-------- 143

Query: 116 KSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLG 175
                   E ++SS + +       + +L +NL  LEETF     + +ERDI+LQ+ KLG
Sbjct: 144 -------AERSYSSRSML------QYNLLAKNLLALEETFVALDSVRMERDIMLQMGKLG 203

Query: 176 ALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKK 235
           A E F TCLSR   +S    LSD    +  D   NQ+       V V S     RR VKK
Sbjct: 204 AAELFKTCLSRYRGSSITSCLSD--TTELVDTTPNQQ-------VFVSS-----RRKVKK 263

Query: 236 RA------MDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTG 295
           +A       +N D+ +S P+  R     I    +   ++     K+R  ++RNE EMSTG
Sbjct: 264 KARRSSVTAENGDQ-SSLPIGLRTTWNNIDVPRV---RRPPKYRKKRERISRNETEMSTG 323

Query: 296 IKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLV 355
           +K+VA++ERIR  LE+ESG++AS+SCWA AA ++ K L + L +GW+CRDEL++ST SLV
Sbjct: 324 VKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLV 383

Query: 356 LFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNS 415
           LFLA+ YR  G+  EDL+QAG +GVLQG ERFD  RG++FSTY+QYWIRKSMS +V+R++
Sbjct: 384 LFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHA 443

Query: 416 RGIQIPWSLTKAINQIQKARKVL--NQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGS 475
           RG+ IP S+ + IN IQKARK L  + G +  +D++IA+ TG  + K+R A+ CLKVVGS
Sbjct: 444 RGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGS 503

Query: 476 VDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLM 535
           +D+K+GD    K++EFT DT+++SPEE V R+  ++DI ++L+GLE RE+QV+VLRYGL 
Sbjct: 504 IDKKVGDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQ 563

Query: 536 DFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
           D++PKSLEEIGKLL VSKEW+RKIE++AM KL+++   ++L +YL+
Sbjct: 564 DYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLRDQPNAEDLRYYLN 570

[Close]
BLAST of MELO3C011121 vs. TAIR 10
Match: AT1G08540.1 (RNApolymerase sigma subunit 2 )

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-55
Identity = 128/394 (32.49%), Postives = 236/394 (59.90%), Query Frame = 0 

Query: 186 TLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDN------ 245
           T   S+   + DL  E  E+  V       +  + V S ++  R++ + + ++       
Sbjct: 179 TASASNKESIGDLESEKQEE--VELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIP 238

Query: 246 ADKVASRPLATRAVKEKI-HSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERI 305
           + K  S P   R V +++ H+  +   + +++SSK  L+  R E E+S GI+ +  LER+
Sbjct: 239 SVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK--LLTVREEHELSAGIQDLLKLERL 298

Query: 306 RETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCS 365
           +  L + SGR  + + WA AA VD K L++++  G  C+D++++S   LV+ +AK Y+ +
Sbjct: 299 QTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGA 358

Query: 366 GLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLT 425
           G+ ++DLVQ G  G+++G E+FD  +GF+FSTY  +WI++++ + ++  SR I++P+ + 
Sbjct: 359 GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMV 418

Query: 426 KAINQIQKARKVL-NQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNM 485
           +A  ++++ARK L ++ G+   +++IA ATGL + ++       K   S+DQK+G   N+
Sbjct: 419 EATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNL 478

Query: 486 KYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIG 545
           K  E  AD    + E+ + ++ M++D+  +L  L +RE+QV+  R+G+ D + K+L+EIG
Sbjct: 479 KPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIG 538

Query: 546 KLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYL 572
           +++ VS+E VR+IE  A  KLKN++   +L  YL
Sbjct: 539 EMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568

[Close]
BLAST of MELO3C011121 vs. TAIR 10
Match: AT2G36990.1 (RNApolymerase sigma-subunit F )

HSP 1 Score: 168.3 bits (425), Expect = 1.8e-41
Identity = 101/345 (29.28%), Postives = 195/345 (56.52%), Query Frame = 0 

Query: 229 RRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTG 288
           RR+ K   +D+   V  +  A +  K+   +            +K +L+ A+ EAE+ + 
Sbjct: 201 RRAPKSNDVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETK-QLLTAKEEAELISH 260

Query: 289 IKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLV 348
           I+ +  LE+++  LE ++G   ++  WAEA  +    L+  +  G   R++L+ +   LV
Sbjct: 261 IQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLRLV 320

Query: 349 LFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNS 408
           + +AK+Y+  GL  +DL+Q G++G+++ VE+F P+ G RF+TY  +WIR+S+ + + +NS
Sbjct: 321 VHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNS 380

Query: 409 RGIQIPWSLTKAINQIQKARKV-LNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSV 468
           R I++P ++   + ++ +ARK  + +G  R S +++A   G+   K+       +   S+
Sbjct: 381 RTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSM 440

Query: 469 DQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMD 528
            Q +    +  + E T D+ I++P  +V ++LM+  + N+L  L  +ER+++ LR+G+  
Sbjct: 441 QQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDG 500

Query: 529 FQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 573
            + +SL EIG++  +SKE VR++E +A+ +LK       L  Y D
Sbjct: 501 GKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYAD 544

[Close]
BLAST of MELO3C011121 vs. TAIR 10
Match: AT5G13730.1 (sigma factor 4 )

HSP 1 Score: 143.3 bits (360), Expect = 6.1e-34
Identity = 107/354 (30.23%), Postives = 181/354 (51.13%), Query Frame = 0 

Query: 221 VYSGKRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVAR 280
           + S KR  RR  ++   +  +          A  E I    +        +S+   +   
Sbjct: 74  IQSEKRRKRRRRRRVGYERLEPEEEENAGVEAEAETISVPVV-------GASRSGFLSRL 133

Query: 281 NEAEMSTGIKVVANLERIRETLEKE---SGRIASMSCWAEAASVDIKDLQKQLQFGWFCR 340
            E ++   +K  A LE +  ++E+    S  +AS     + ++ +I   +K+       R
Sbjct: 134 EEVQLCLYLKEGAKLENLGTSVEENEMVSVLLASGRGKKKRSANEILCRRKE------AR 193

Query: 341 DELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIR 400
           +++ R    LV+ +A  Y+  GL ++DL+Q G++G+L+G ERFDP RG++ STY+ +WI+
Sbjct: 194 EKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIK 253

Query: 401 KSMSRVVARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRY-SDDDIARATGLPLAKVRV 460
           +++ R +A  SR +++P S+ +   ++ +A  VL +  RR  S ++IA    L ++ VR+
Sbjct: 254 QAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRL 313

Query: 461 ASNCLKVVGSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRER 520
           A    +   S+D+       M   E         PEE VKR+ MK +I  +L  L +RE 
Sbjct: 314 AVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARES 373

Query: 521 QVLVLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHY 571
           +VL L +GL    P S EEIGK L +S+E VR+I   A+ KL+N   V +L  Y
Sbjct: 374 RVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414

[Close]
BLAST of MELO3C011121 vs. TAIR 10
Match: AT1G64860.1 (sigma factor A )

HSP 1 Score: 126.7 bits (317), Expect = 5.9e-29
Identity = 88/289 (30.45%), Postives = 157/289 (54.33%), Query Frame = 0 

Query: 278 VARNEAEMSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCR 337
           V R   ++ +G+++  +  R+++ L    G   S    A +  +   +LQ  L      R
Sbjct: 205 VVRLSKKIKSGLRLDDHKSRLKDRL----GCEPSDEQLAVSLKISRAELQAWLMECHLAR 264

Query: 338 DELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIR 397
           ++L  S   LV+ +A++Y   G  M DLVQ G +G+L+G+E+FD  +GFR STY+ +WIR
Sbjct: 265 EKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIR 324

Query: 398 KSMSRVVARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVA 457
           + +SR +  NSR +++P  L + +  I+ A+  L + G   S D IA +  +   KVR A
Sbjct: 325 QGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNA 384

Query: 458 SNCLKVVGSVDQKMGDGLN----MKYMEFTADTSIQ-SPEETVKRKLMKKDIFNILQG-L 517
           +  +  V S+D+     LN      +  + ADT ++ +P        +K+++  ++   L
Sbjct: 385 TEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATL 444

Query: 518 ESRERQVLVLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKN 561
             RE++++ L YGL D +  + E+I K + +S+E VR++   A+ KLK+
Sbjct: 445 GEREKEIIRLYYGL-DKECLTWEDISKRIGLSRERVRQVGLVALEKLKH 488

The following BLAST results are available for this feature:
BLAST of MELO3C011121 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008444981.10.0e+0097.73PREDICTED: RNA polymerase sigma factor sigC [Cucumis melo][more]
KAA0065060.15.2e-29399.81RNA polymerase sigma factor sigC [Cucumis melo var. makuwa][more]
XP_004148429.21.0e-28590.56RNA polymerase sigma factor sigC isoform X1 [Cucumis sativus][more]
XP_038884658.19.4e-27987.15RNA polymerase sigma factor sigC isoform X1 [Benincasa hispida][more]
XP_022996944.12.9e-26483.92RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita maxima][more]
BLAST of MELO3C011121 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O246217.6e-11445.82RNA polymerase sigma factor sigC OS=Arabidopsis thaliana OX=3702 GN=SIGC PE=2 SV... [more]
O220561.8e-5432.49RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV... [more]
P266834.4e-4532.84RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UT... [more]
P380239.8e-4533.04RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / ... [more]
Q030661.7e-4136.68RNA polymerase sigma-C factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX ... [more]
BLAST of MELO3C011121 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BBM80.0e+0097.73RNA polymerase sigma factor sigC OS=Cucumis melo OX=3656 GN=LOC103488161 PE=3 SV... [more]
A0A5A7VCX92.5e-29399.81RNA polymerase sigma factor sigC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A0A0LLW15.0e-28690.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372830 PE=3 SV=1[more]
A0A6J1KA341.4e-26483.92RNA polymerase sigma factor sigC-like isoform X2 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1KCF59.2e-26483.62RNA polymerase sigma factor sigC-like isoform X1 OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of MELO3C011121 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53920.15.4e-11545.82RNApolymerase sigma-subunit C [more]
AT1G08540.11.3e-5532.49RNApolymerase sigma subunit 2 [more]
AT2G36990.11.8e-4129.28RNApolymerase sigma-subunit F [more]
AT5G13730.16.1e-3430.23sigma factor 4 [more]
AT1G64860.15.9e-2930.45sigma factor A [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 364..377
score: 44.06
coord: 532..547
score: 40.69
coord: 511..523
score: 45.36
coord: 547..558
score: 51.72
coord: 388..396
score: 62.37
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 508..559
e-value: 1.0E-16
score: 60.1
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 344..409
e-value: 4.3E-14
score: 52.0
NoneNo IPR availableGENE3D1.20.140.160coord: 412..563
e-value: 1.0E-21
score: 79.7
NoneNo IPR availableGENE3D1.20.120.1810coord: 222..409
e-value: 4.2E-31
score: 110.3
NoneNo IPR availablePANTHERPTHR30603:SF13RNA POLYMERASE SIGMA FACTOR SIGCcoord: 11..572
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 11..572
NoneNo IPR availableCDDcd06171Sigma70_r4coord: 501..559
e-value: 8.20855E-12
score: 58.2698
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 337..560
e-value: 3.4E-29
score: 99.5
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 420..494
e-value: 6.3E-9
score: 35.8
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 471..561
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 413..485
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 275..409

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011121.1MELO3C011121.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity