MELO3C011084 (gene) Melon (DHL92) v4

Overview
NameMELO3C011084
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRibosomal RNA small subunit methyltransferase A
Locationchr03: 26485955 .. 26489170 (+)
RNA-Seq ExpressionMELO3C011084
SyntenyMELO3C011084
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGGTGTCAAATGATTAGTGGAGGAAGCCAAGCCGATCCATGGATCCGAACTGTAGCCAAAATAATAAATCCTTCCTCTCAAAATCTTCTACAGCTTTGCAACTCCCGGCTCTTTTTTTCCCGATCCATTGGCTGAAAATTTGTGGTGTTCGATTTGAATTTGAGTCCTCAATTTGTAGAACAACAACAGTCTTTCGCTTCGAAATTTCTCCGTTAAGGTAGATTTCTGTATTTCTTCTTCAGCTTTTAGTTTTTTTTTTTAATTGCTTTATCATTATTGGTTTGATTCTGCGTTTGGCTTAAGATTCCTGGATTTTTTTTTTTTGGTTACTTTCGGTTGCAATGTTTGAAAAGCAAGTTTTCGGAAAGTCAATTACTAGTGGGAGAAGGAGGAGGTTGCTTCAGGAAGAAATTGAATTGAGATTTTGTTTGTGTTTGGAATTTGAGAGTTTTGATGATTTAGAGGTATTTGTCGGTTTGTTTAAATTTTCAGTGCTTGAATGAGTCTGAATCGAACAAGAGAACGTGATTGTTTCTTTTTTTGAATTTTTTTTCTCTGTCCTTTTTTTTATGTAGAAACAATATTAAATTGTAGGTTCTTTGAATGTAGCCGACTTTTTGAGTAGAAGCAATCTCTTGAAATGGAAGAAGGGAAAAAGGATTGTTCATGGCTTTAATCGTGAATTTTGAGGGAGATAAATTTAGTAAAGGCGTGTTTCCTTTTTTGGACACAGCTCGATTTTATCAAGTTGGTTTCTCGGTAGTGGTTATTGTTTTGATTTATCTTTTTCCAATTCTGTGAAAGCTTCTATATAGATTGGGCAACTGGATTTAGAAATTTTTGTCATTCGTAATCATATCCTAAAAGTTATATATGTATATTTCATTAGCTATTTTTTCATGTTCTTCTGTCTTGATTCTACAATCTGGAAACTTGGTCAAAAGCCTTGAAGAATCTTAGATGATTCCTGATTTTCAAGGCTTGAAGTAAGGTAAAACAGAGTTATCTCTCTTCTTTTTCTTCCTTCCTGAGCTTGTGGGATCCTTTGGATACATTCAAAACTCCAGCGTTTAGTCAATTATGCTACATTAGATGTGATGAAATTCGATTGTTTGTTTCTTCATTTTGTTAATATGGGCGATCTATGATTGCAGCAATCTCGTTTGTTGTTGTTTCGCAATTTGATTGTTCAGTTTCTTCCTGCTATCTTATCCTTAACAGGGAAAAACTTGCTCCATTTCACCTCTCATACTTTAGAATCCACCTGTGATTAGCTTATATTTCTTTGGAGGAAGTTGGTACTTTTTAGTAAAGAAAATTGCTCTCACACATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCATTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCATCTAGAAGGGTGAAGAGGAAATGGCATAGTCGAGAAGAGAGAAAAGTTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGATTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAGAGCGATGATGAATCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGACTTTGTGGATGAGACTAAGAATAGTATCTTAAGTGCCATTGGGAACATCAACGACAGCTTTTCTGCTGGTAAGAGTTGTTTCTTCTCAAGCTTGCACTTAGTTGGTGTTGCGTGTTAGTTATTGCTTTTGTCTACCAAAAGATTCTTCTAGTCCTCTTTCGTAAACGGTTAACTTCATTGTCCACAATCCAACTTATACTGTAAATGTTGGAAATCAGATAGACGTATTCCCAAGAAGGAAAAATTTTCATGTAATTGTGTCTCATATTCATAGACCCTTATTTATAGGAAGATGAGGCTATTTTCTTTTAGGAATCATGCTCATCAGGAGGCGTTGTGAAACTTCATCTCTAAGAAATATTACATGACACATTCTCAATAGGATAATAATGCATGAGAAAAAGATATCATGTACTAAAACTGTGTAAGCAAATAGGTTTATATGCTGGTAGTGTAGAATGATAGAATCAAACTCAACTTGTTTCAGTGTATAAACCTCCTGGCTCCCTTACAGACACTCTAAATAACCACAGTAGGACTTTAATAGAATTGTATTCTATTTGCTTTGGGCCTTTGCGGCAATATTTGGAGTTTCCTTGTTCTGATTGGCTTCATATTGAGTGAATGTTAAAGCCGATGCGAATAATACTAAAAAATAAGTTACTACATTTGTAATTTCCTTTTGGTTTGTTGTACATTTGTTTTAAGCTGATTATGTCTGCACTTTTCCATGGAACAGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGCTCTGATTCCAAGAAAGAAAACCATTTTGTGATATATAGCCATTTAAAAAAACTGAAAAAAAATCCAAAAAAGAAAAAAGAAAAAGATATAGAATACTATCTATTCTGGCTTCTTTTGACAGTACTTGCTGAGAAGCAAATTGGACAGTGGGTGGAGATTCTCATCTTTTCAATTCTTTTTGACCATATTATGCTCTTAAAAAGAGAGACTTAAAAAGAATATGACCTCACCCGGGATGAAGCTTGTAAAAGTGGAATGTTAATAATTTGAGACTCCTTTATAAATGTGGAAGAGGGAGACAGAGGAGGAAAAAGGTTGAGCCAACCAGCCATGGGGTTTGAAGAAAAAGAATATTAAAGAAGAGGTGGAAGTGGAAGTGGAAGTGGAAGTGGAAGTGGGAGGTCTTTTGTTATTCTCTGGAGTTTTTATGTATAAAGTGGGAAGTGTTAAATTCATGTGAAAAGTTGGTGTAAATAGTGAGTCCATTTATGTATGGTTCAGTGATGTAAATATGAGATGAGTGGGTTTGGTTCATCTAAAATGTTGCTCTAAAGGATGGACCCATTTGTAAAATTTGTTGTACATAGTAACACAGTTGTGCTGTGCAGGCATGAAAATTGTAGATATCTCTATCCTCATTCAATGTAATATTCTTTAATATATAATATATGTATATGTATAGCATTAAAACCTA

mRNA sequence

ATTGGTGTCAAATGATTAGTGGAGGAAGCCAAGCCGATCCATGGATCCGAACTGTAGCCAAAATAATAAATCCTTCCTCTCAAAATCTTCTACAGCTTTGCAACTCCCGGCTCTTTTTTTCCCGATCCATTGGCTGAAAATTTGTGGTGTTCGATTTGAATTTGAGTCCTCAATTTGTAGAACAACAACAGTCTTTCGCTTCGAAATTTCTCCGTTAAGGGAAAAACTTGCTCCATTTCACCTCTCATACTTTAGAATCCACCTGTGATTAGCTTATATTTCTTTGGAGGAAGTTGGTACTTTTTAGTAAAGAAAATTGCTCTCACACATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCATTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCATCTAGAAGGGTGAAGAGGAAATGGCATAGTCGAGAAGAGAGAAAAGTTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGATTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAGAGCGATGATGAATCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGACTTTGTGGATGAGACTAAGAATAGTATCTTAAGTGCCATTGGGAACATCAACGACAGCTTTTCTGCTGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGCTCTGATTCCAAGAAAGAAAACCATTTTGTGATATATAGCCATTTAAAAAAACTGAAAAAAAATCCAAAAAAGAAAAAAGAAAAAGATATAGAATACTATCTATTCTGGCTTCTTTTGACAGTACTTGCTGAGAAGCAAATTGGACAGTGGGTGGAGATTCTCATCTTTTCAATTCTTTTTGACCATATTATGCTCTTAAAAAGAGAGACTTAAAAAGAATATGACCTCACCCGGGATGAAGCTTGTAAAAGTGGAATGTTAATAATTTGAGACTCCTTTATAAATGTGGAAGAGGGAGACAGAGGAGGAAAAAGGTTGAGCCAACCAGCCATGGGGTTTGAAGAAAAAGAATATTAAAGAAGAGGTGGAAGTGGAAGTGGAAGTGGAAGTGGAAGTGGGAGGTCTTTTGTTATTCTCTGGAGTTTTTATGTATAAAGTGGGAAGTGTTAAATTCATGTGAAAAGTTGGTGTAAATAGTGAGTCCATTTATGTATGGTTCAGTGATGTAAATATGAGATGAGTGGGTTTGGTTCATCTAAAATGTTGCTCTAAAGGATGGACCCATTTGTAAAATTTGTTGTACATAGTAACACAGTTGTGCTGTGCAGGCATGAAAATTGTAGATATCTCTATCCTCATTCAATGTAATATTCTTTAATATATAATATATGTATATGTATAGCATTAAAACCTA

Coding sequence (CDS)

ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCATTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCATCTAGAAGGGTGAAGAGGAAATGGCATAGTCGAGAAGAGAGAAAAGTTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGATTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAGAGCGATGATGAATCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGACTTTGTGGATGAGACTAAGAATAGTATCTTAAGTGCCATTGGGAACATCAACGACAGCTTTTCTGCTGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAA

Protein sequence

MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC
Homology
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BLAST of MELO3C011084 vs. NCBI nr
Match: XP_008444920.1 (PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_016900065.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 9.6e-94
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]
BLAST of MELO3C011084 vs. NCBI nr
Match: XP_038886443.1 (uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886445.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886446.1 uncharacterized protein LOC120076637 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 1.6e-93
Identity = 169/171 (98.83%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCYGRIYNDFVDETKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]
BLAST of MELO3C011084 vs. NCBI nr
Match: XP_004152600.1 (uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736757.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736758.1 uncharacterized protein LOC101213956 [Cucumis sativus] >KGN62990.2 hypothetical protein Csa_022594 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 2.8e-93
Identity = 168/171 (98.25%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCYGRIYNDFVDETKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]
BLAST of MELO3C011084 vs. NCBI nr
Match: XP_022997281.1 (uncharacterized protein LOC111492231 isoform X2 [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 6.6e-87
Identity = 159/171 (92.98%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCY RIYNDFVDETK S+LSA+GNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]
BLAST of MELO3C011084 vs. NCBI nr
Match: XP_023545352.1 (uncharacterized protein LOC111804795 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 8.7e-87
Identity = 158/171 (92.40%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGS+LNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSSLNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCISGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCY RIYNDFVDETK S+LSA+GNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]
BLAST of MELO3C011084 vs. ExPASy TrEMBL
Match: A0A1S3BB05 (uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.6e-94
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]
BLAST of MELO3C011084 vs. ExPASy TrEMBL
Match: A0A6J1K730 (uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.2e-87
Identity = 159/171 (92.98%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCY RIYNDFVDETK S+LSA+GNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]
BLAST of MELO3C011084 vs. ExPASy TrEMBL
Match: A0A6J1HCV7 (uncharacterized protein LOC111462457 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462457 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.2e-87
Identity = 158/171 (92.40%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 172
           AVLVPCY RIYNDFVDETK S+LSA+GNI+DSFS ESKKYMEQWLS+LQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSALQNC 171

[Close]
BLAST of MELO3C011084 vs. ExPASy TrEMBL
Match: A0A6J1KDE3 (uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86
Identity = 160/172 (93.02%), Postives = 167/172 (97.09%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFS-AESKKYMEQWLSSLQNC 172
           AVLVPCY RIYNDFVDETK S+LSA+GNI+DSFS AESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTAESKKYMEQWLSSLQNC 172

[Close]
BLAST of MELO3C011084 vs. ExPASy TrEMBL
Match: A0A6J1HCV2 (uncharacterized protein LOC111462457 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462457 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.1e-86
Identity = 159/172 (92.44%), Postives = 167/172 (97.09%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFS-AESKKYMEQWLSSLQNC 172
           AVLVPCY RIYNDFVDETK S+LSA+GNI+DSFS AESKKYMEQWLS+LQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTAESKKYMEQWLSALQNC 172

[Close]
BLAST of MELO3C011084 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17
Identity = 54/133 (40.60%), Postives = 70/133 (52.63%), Query Frame = 0 

Query: 38  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSD 97
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 98  WSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAE 157
           WS+GW+EPHGP FQSDDE +D  F VLVPCY R   +      N +LSA+ N+ +    +
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNLPNGLPPD 134

Query: 158 SKKYMEQWLSSLQ 170
            K YMEQWLSSLQ
Sbjct: 140 GKNYMEQWLSSLQ 134

[Close]
BLAST of MELO3C011084 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-17
Identity = 63/173 (36.42%), Postives = 88/173 (50.87%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSG---KHKEPRSS--NGGSALNASLDTANRETDTLKFPLVNGANISS 60
           M+V+FP+L  WL  G   K +E + S   G S+L+ SL    ++T T K       + SS
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPSL----KKTTTSK-----TGSSSS 60

Query: 61  SSRRVKRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE 120
           S ++ KR W  R       E D +      G V   E DD +WSIGW EPHGPGF+++D+
Sbjct: 61  SVKKTKRGWIGRGGSGSGGEEDKI------GNVVFPEPDDPEWSIGWVEPHGPGFKAEDD 120

Query: 121 SDNSFAVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSL 169
               F VLVP Y ++ +   ++  N   S         +A   K MEQWLSS+
Sbjct: 121 DCGGFVVLVPLYKKVMDGSGNQIPNGFFSP--------AAPDGKNMEQWLSSM 150

[Close]
BLAST of MELO3C011084 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-11
Identity = 43/113 (38.05%), Postives = 57/113 (50.44%), Query Frame = 0 

Query: 38  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSD 97
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 98  WSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVDETKNSILSAIGNI 150
           WS+GW+EPHGP FQSDDE +D  F VLVPCY R   +      N +LSA+ N+
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNL 114

The following BLAST results are available for this feature:
BLAST of MELO3C011084 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008444920.19.6e-94100.00PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 P... [more]
XP_038886443.11.6e-9398.83uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 unchara... [more]
XP_004152600.12.8e-9398.25uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharact... [more]
XP_022997281.16.6e-8792.98uncharacterized protein LOC111492231 isoform X2 [Cucurbita maxima][more]
XP_023545352.18.7e-8792.40uncharacterized protein LOC111804795 isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C011084 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C011084 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BB054.6e-94100.00uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=... [more]
A0A6J1K7303.2e-8792.98uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HCV77.2e-8792.40uncharacterized protein LOC111462457 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KDE32.7e-8693.02uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HCV26.1e-8692.44uncharacterized protein LOC111462457 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of MELO3C011084 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38060.22.0e-1740.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G65480.12.7e-1736.42unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G38060.16.3e-1138.05unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34464:SF5SUBFAMILY NOT NAMEDcoord: 1..170
NoneNo IPR availablePANTHERPTHR34464OS09G0376300 PROTEINcoord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011084.1MELO3C011084.1mRNA