MELO3C011008.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C011008.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Gibberellin-regulated protein 2
Location	chr03: 27798776 .. 27799794 (+)
RNA-Seq Expression	MELO3C011008.jh1
Synteny	MELO3C011008.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGATGATGATATGTTGTCAAATTTATATGATATATAATATTAAATGTATGTTTAAAATTATACGTACATCAATTATTTCGGAGGGTAGGAACGAAAAGATTGAACTCAAATTCCATTTCCCTTTACATAGAACATGTCATATCCTGCACCAGTTCCCACCCACTCCCCTGTTCACTTAACCACAAAGCTTAGCTTTTTTTTTTTGCTATAAAACCAACCCTTTCTATCACTGATTTCTCCAAAATATTATCCACTCCAATTCAAGAATCCCCTAGAAAACCATGTCCATCCTCACCAAAGCTCTCTTTGCTTCCCTCCTCCTCTCTCTCCTCTTCCTCCACTTTGTAAAATTGATCTAAAACCACTTTTCTTCTTTCTTCTCCAAAAAAAAATTAAATTTACTAATTATTTTCTCTATTGAAATTAATTGTAGGTGGAATCCAGCGGCGTGGGTTTACTCCCTCGAAGTCCTCAGAAAATGGGTGATTATAATTTTTTAAAATCTGTTCTTTTAGATTAGATTAACTTATCGTAAGTGTTGGGCTTAAGCTTTTACGTACAGATTGCCGCGGCGCTTGTACGAGAAGGTGCAGCTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGCTGCAACTGCGTTCCGCCAGGGACTTCCGGCAACCACCATCTCTGCCCTTGCTACGCCGCCATGACCACCCACGGCGGCCGCCTCAAGTGCCCTTGAATTGACCCGTTGACCGCCTCAACTTCTTGTGTATGTGTGTATACATGCATAAATAATCATGAACCTATAAACAGGACTGTGTTTTGTTTATAGAAATGGATTATGGATGTAAACTTTTATGGTGTTTTTTTTTTTCTTTCTTATGCCCATATTATGCATAAAACTAATTTGCTATCTTGGTTTCTTTCCTTTTTATTATTTATGTATTTTCTATAAAAAGTTTCTATTGAAAATGACAGTGGGAAGAGTAACTTGATAATTTTAATTTTTCTT

mRNA sequence

CTTGATGATGATATGTTGTCAAATTTATATGATATATAATATTAAATGTATGTTTAAAATTATACGTACATCAATTATTTCGGAGGGTAGGAACGAAAAGATTGAACTCAAATTCCATTTCCCTTTACATAGAACATGTCATATCCTGCACCAGTTCCCACCCACTCCCCTGTTCACTTAACCACAAAGCTTAGCTTTTTTTTTTTGCTATAAAACCAACCCTTTCTATCACTGATTTCTCCAAAATATTATCCACTCCAATTCAAGAATCCCCTAGAAAACCATGTCCATCCTCACCAAAGCTCTCTTTGCTTCCCTCCTCCTCTCTCTCCTCTTCCTCCACTTTGTGGAATCCAGCGGCGTGGGTTTACTCCCTCGAAGTCCTCAGAAAATGGATTGCCGCGGCGCTTGTACGAGAAGGTGCAGCTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGCTGCAACTGCGTTCCGCCAGGGACTTCCGGCAACCACCATCTCTGCCCTTGCTACGCCGCCATGACCACCCACGGCGGCCGCCTCAAGTGCCCTTGAATTGACCCGTTGACCGCCTCAACTTCTTGTGTATGTGTGTATACATGCATAAATAATCATGAACCTATAAACAGGACTGTGTTTTGTTTATAGAAATGGATTATGGATGTAAACTTTTATGGTGTTTTTTTTTTTCTTTCTTATGCCCATATTATGCATAAAACTAATTTGCTATCTTGGTTTCTTTCCTTTTTATTATTTATGTATTTTCTATAAAAAGTTTCTATTGAAAATGACAGTGGGAAGAGTAACTTGATAATTTTAATTTTTCTT

Coding sequence (CDS)

ATGTCCATCCTCACCAAAGCTCTCTTTGCTTCCCTCCTCCTCTCTCTCCTCTTCCTCCACTTTGTGGAATCCAGCGGCGTGGGTTTACTCCCTCGAAGTCCTCAGAAAATGGATTGCCGCGGCGCTTGTACGAGAAGGTGCAGCTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGCTGCAACTGCGTTCCGCCAGGGACTTCCGGCAACCACCATCTCTGCCCTTGCTACGCCGCCATGACCACCCACGGCGGCCGCCTCAAGTGCCCTTGA

Protein sequence

MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

Homology

[Close]

BLAST of MELO3C011008.jh1 vs. NCBI nr
Match: XP_008444802.1 (PREDICTED: snakin-2-like [Cucumis melo])

HSP 1 Score: 204 bits (518), Expect = 3.44e-66
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC
Sbjct: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. NCBI nr
Match: XP_031736573.1 (snakin-2 [Cucumis sativus])

HSP 1 Score: 191 bits (484), Expect = 5.30e-61
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          M ILTK LFASLLLSLLFLHFVES+GVGLLP +P++MDCRGACTRRC+LSSRPRLCNRAC
Sbjct: 1  MFILTKPLFASLLLSLLFLHFVESNGVGLLPPNPRRMDCRGACTRRCTLSSRPRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. NCBI nr
Match: XP_038886089.1 (snakin-2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 174 bits (440), Expect = 2.74e-54
Identity = 82/97 (84.54%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          MS  +KAL ASL LSLLFLH VES+GVGL+P SPQKMDC GAC  RC LSSR RLCNRAC
Sbjct: 1  MSFFSKALIASLFLSLLFLHSVESNGVGLIPPSPQKMDCGGACAGRCRLSSRQRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCRRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. NCBI nr
Match: XP_038886088.1 (snakin-2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 169 bits (427), Expect = 2.80e-52
Identity = 82/99 (82.83%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFV--ESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNR 60
          MS  +KAL ASL LSLLFLH V  ES+GVGL+P SPQKMDC GAC  RC LSSR RLCNR
Sbjct: 1  MSFFSKALIASLFLSLLFLHSVKVESNGVGLIPPSPQKMDCGGACAGRCRLSSRQRLCNR 60

Query: 61 ACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          ACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 ACGTCCRRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 99

[Close]

BLAST of MELO3C011008.jh1 vs. NCBI nr
Match: XP_023002563.1 (snakin-2-like [Cucurbita maxima])

HSP 1 Score: 166 bits (421), Expect = 2.17e-51
Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          M+I +KAL ASLLLSLLFLH VES G  ++  SPQKMDC GAC  RC LSSRPRLC+RAC
Sbjct: 1  MAISSKALIASLLLSLLFLHSVESIGAAMVSPSPQKMDCGGACAARCRLSSRPRLCHRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYASLTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.9e-29
Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 4   LTKALFASLLLSLLFLHFVE--------SSGVGLLPRSPQKMDCRGACTRRCSLSSRPRL 63
           ++KALFASLLLSLL L  V+        S+ +     S +K+DC GAC  RC LSSRPRL
Sbjct: 3   ISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRL 62

Query: 64  CNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
           CNRACGTCC RCNCVPPGTSGN   CPCYA++TTHG + KCP
Sbjct: 63  CNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.9e-26
Identity = 57/92 (61.96%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 6  KALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQ 65
          + L ASLL+SLL L FV +  V        K+DC   C  RCSLSSRP LC+RACGTCC 
Sbjct: 5  RVLLASLLISLLVLDFVHADMV--TSNDAPKIDCNSRCQERCSLSSRPNLCHRACGTCCA 64

Query: 66 RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Sbjct: 65 RCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 8.6e-26
Identity = 57/96 (59.38%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 4  LTKALFASLLLSLLFLHFVESSGVGLLPRS--PQKMDCRGACTRRCSLSSRPRLCNRACG 63
          ++KAL ASLL+SLL L  V++       ++   +K+DC  AC  RC LS RPRLC+RACG
Sbjct: 3  ISKALIASLLISLLVLQLVQADVENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACG 62

Query: 64 TCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          TCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Sbjct: 63 TCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.5e-25
Identity = 59/101 (58.42%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 7  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLC 66
          A+F S L+ LL L          H  E S VG       K+DC G C  RCS SSRP LC
Sbjct: 2  AIFRSTLVLLLILFCLTTFELHVHAAEDSQVG---EGVVKIDCGGRCKGRCSKSSRPNLC 61

Query: 67 NRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
           RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLKCP
Sbjct: 62 LRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-23
Identity = 56/101 (55.45%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 7  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLC 66
          A+F S L+ LL +          H  + + VG       K+DC G C  RCS SSR +LC
Sbjct: 2  AVFRSTLVLLLIIVCLTTYELHVHAADGAKVG---EGVVKIDCGGRCKDRCSKSSRTKLC 61

Query: 67 NRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
           RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKCP
Sbjct: 62 LRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BBY7 (snakin-2-like OS=Cucumis melo OX=3656 GN=LOC103488041 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.66e-66
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC
Sbjct: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LNS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368260 PE=3 SV=1)

HSP 1 Score: 191 bits (484), Expect = 2.57e-61
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          M ILTK LFASLLLSLLFLHFVES+GVGLLP +P++MDCRGACTRRC+LSSRPRLCNRAC
Sbjct: 1  MFILTKPLFASLLLSLLFLHFVESNGVGLLPPNPRRMDCRGACTRRCTLSSRPRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KTY1 (snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496372 PE=3 SV=1)

HSP 1 Score: 166 bits (421), Expect = 1.05e-51
Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          M+I +KAL ASLLLSLLFLH VES G  ++  SPQKMDC GAC  RC LSSRPRLC+RAC
Sbjct: 1  MAISSKALIASLLLSLLFLHSVESIGAAMVSPSPQKMDCGGACAARCRLSSRPRLCHRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYASLTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GJ50 (snakin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111454338 PE=3 SV=1)

HSP 1 Score: 166 bits (419), Expect = 2.12e-51
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60
          M+I +KAL ASLLLSLLFLH VES G  ++  SPQKMDC GAC  RC LSSRPRLC+RAC
Sbjct: 1  MAISSKALIASLLLSLLFLHSVESIGAAMVSPSPQKMDCGGACAARCRLSSRPRLCHRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
          GTCCQRCNCVPPGTSGNHH+CPCYA++TTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHMCPCYASLTTHGGRLKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CRW3 (snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111014004 PE=3 SV=1)

HSP 1 Score: 144 bits (363), Expect = 1.06e-42
Identity = 78/109 (71.56%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 1   MSILTKALF-ASLLL-SLLFLHF---------VES-SGVGLLPRSPQKMDCRGACTRRCS 60
           MS+ +K L  ASLLL SLLFLH          VES    G+ P +P KMDC GAC  RC 
Sbjct: 1   MSMFSKVLIVASLLLFSLLFLHAAADDHPALQVESVDQAGISPSTPYKMDCGGACAGRCR 60

Query: 61  LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97
           LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGR KCP
Sbjct: 61  LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP 109

[Close]

BLAST of MELO3C011008.jh1 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 57/92 (61.96%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 6  KALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQ 65
          + L ASLL+SLL L FV +  V        K+DC   C  RCSLSSRP LC+RACGTCC 
Sbjct: 5  RVLLASLLISLLVLDFVHADMV--TSNDAPKIDCNSRCQERCSLSSRPNLCHRACGTCCA 64

Query: 66 RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Sbjct: 65 RCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of MELO3C011008.jh1 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 117.5 bits (293), Expect = 6.1e-27
Identity = 57/96 (59.38%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 4  LTKALFASLLLSLLFLHFVESSGVGLLPRS--PQKMDCRGACTRRCSLSSRPRLCNRACG 63
          ++KAL ASLL+SLL L  V++       ++   +K+DC  AC  RC LS RPRLC+RACG
Sbjct: 3  ISKALIASLLISLLVLQLVQADVENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACG 62

Query: 64 TCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          TCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Sbjct: 63 TCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of MELO3C011008.jh1 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-26
Identity = 57/95 (60.00%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 4  LTKALFASLLLSLLFLHFVESSGVGLLPRS-PQKMDCRGACTRRCSLSSRPRLCNRACGT 63
          ++KAL ASLL+SLL L  V++           +K+DC  AC  RC LS RPRLC+RACGT
Sbjct: 3  ISKALIASLLISLLVLQLVQADENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGT 62

Query: 64 CCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          CC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Sbjct: 63 CCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

[Close]

BLAST of MELO3C011008.jh1 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26
Identity = 59/101 (58.42%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 7  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLC 66
          A+F S L+ LL L          H  E S VG       K+DC G C  RCS SSRP LC
Sbjct: 2  AIFRSTLVLLLILFCLTTFELHVHAAEDSQVG---EGVVKIDCGGRCKGRCSKSSRPNLC 61

Query: 67 NRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
           RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLKCP
Sbjct: 62 LRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of MELO3C011008.jh1 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 109.0 bits (271), Expect = 2.2e-24
Identity = 56/101 (55.45%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 7  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLC 66
          A+F S L+ LL +          H  + + VG       K+DC G C  RCS SSR +LC
Sbjct: 2  AVFRSTLVLLLIIVCLTTYELHVHAADGAKVG---EGVVKIDCGGRCKDRCSKSSRTKLC 61

Query: 67 NRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
           RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKCP
Sbjct: 62 LRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

The following BLAST results are available for this feature:

BLAST of MELO3C011008.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444802.1	3.44e-66	100.00	PREDICTED: snakin-2-like [Cucumis melo]	[more]
XP_031736573.1	5.30e-61	91.75	snakin-2 [Cucumis sativus]	[more]
XP_038886089.1	2.74e-54	84.54	snakin-2-like isoform X2 [Benincasa hispida]	[more]
XP_038886088.1	2.80e-52	82.83	snakin-2-like isoform X1 [Benincasa hispida]	[more]
XP_023002563.1	2.17e-51	80.41	snakin-2-like [Cucurbita maxima]	[more]

BLAST of MELO3C011008.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	4.9e-29	62.75	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
F4IQJ4	3.9e-26	61.96	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46689	8.6e-26	59.38	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
P46687	9.5e-25	58.42	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
P46688	3.1e-23	55.45	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]

BLAST of MELO3C011008.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBY7	1.66e-66	100.00	snakin-2-like OS=Cucumis melo OX=3656 GN=LOC103488041 PE=3 SV=1	[more]
A0A0A0LNS5	2.57e-61	91.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368260 PE=3 SV=1	[more]
A0A6J1KTY1	1.05e-51	80.41	snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496372 PE=3 SV=1	[more]
A0A6J1GJ50	2.12e-51	79.38	snakin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111454338 PE=3 SV=1	[more]
A0A6J1CRW3	1.06e-42	71.56	snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111014004 PE=3 SV=1	[more]

BLAST of MELO3C011008.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18420.1	2.7e-27	61.96	Gibberellin-regulated family protein	[more]
AT1G75750.1	6.1e-27	59.38	GAST1 protein homolog 1	[more]
AT1G75750.2	1.0e-26	60.00	GAST1 protein homolog 1	[more]
AT4G09600.1	6.7e-26	58.42	GAST1 protein homolog 3	[more]
AT4G09610.1	2.2e-24	55.45	GAST1 protein homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 38..97 e-value: 2.0E-22 score: 79.1
None	No IPR available	PANTHER	PTHR23201:SF67	SNAKIN-2-LIKE	coord: 6..97
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 6..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011008.jh1.t1	MELO3C011008.jh1.t1	mRNA