MELO3C011006.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C011006.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr03: 27806184 .. 27806588 (-)
RNA-Seq Expression	MELO3C011006.jh1
Synteny	MELO3C011006.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATCCAGCCGTTTCGACGAGGCCGAAATCAAACGGAGCAAACACCTTCGTCATTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCCCAAGAATCTCTCCGGCGAGGATCATGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGTCAGCCGCGGCGGCGGCGGCAGGGCCATTTACGGCGTTGAAGCAGAAAAATCTGGAGAAATTTGAGCCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTTAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCAGAATTTCCGATGCAAATGCGATGGTATGA

mRNA sequence

ATGAAGAATCCAGCCGTTTCGACGAGGCCGAAATCAAACGGAGCAAACACCTTCGTCATTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCCCAAGAATCTCTCCGGCGAGGATCATGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGTCAGCCGCGGCGGCGGCGGCAGGGCCATTTACGGCGTTGAAGCAGAAAAATCTGGAGAAATTTGAGCCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTTAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCAGAATTTCCGATGCAAATGCGATGGTATGA

Coding sequence (CDS)

ATGAAGAATCCAGCCGTTTCGACGAGGCCGAAATCAAACGGAGCAAACACCTTCGTCATTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCCCAAGAATCTCTCCGGCGAGGATCATGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGTCAGCCGCGGCGGCGGCGGCAGGGCCATTTACGGCGTTGAAGCAGAAAAATCTGGAGAAATTTGAGCCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTTAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCAGAATTTCCGATGCAAATGCGATGGTATGA

Protein sequence

MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSRGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIGVDEGRISDANAMV

Homology

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BLAST of MELO3C011006.jh1 vs. NCBI nr
Match: KAA0065168.1 (hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (689), Expect = 4.35e-91
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
           MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS
Sbjct: 1   MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60

Query: 61  RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
           RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI
Sbjct: 61  RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120

Query: 121 GVDEGRISDANAMV 134
           GVDEGRISDANAMV
Sbjct: 121 GVDEGRISDANAMV 134

[Close]

BLAST of MELO3C011006.jh1 vs. NCBI nr
Match: KAE8652124.1 (hypothetical protein Csa_022629 [Cucumis sativus])

HSP 1 Score: 239 bits (610), Expect = 6.80e-79
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
           MKNPAVSTRPKSNGAN+FV+HVKDDQDDYRGGSPA RISPARI+SRIRRV MRFIFYLPS
Sbjct: 1   MKNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPS 60

Query: 61  RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
           RGS+AAAAAA     LKQ+NLEKFEPPKTSCSSSYSSYSHYNEAIADCIEF NKSSQDQI
Sbjct: 61  RGSAAAAAAA-----LKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQI 120

Query: 121 GVDEGRISDANAM 133
           GVDEGRISDANAM
Sbjct: 121 GVDEGRISDANAM 128

[Close]

BLAST of MELO3C011006.jh1 vs. NCBI nr
Match: XP_022996993.1 (uncharacterized protein LOC111492057 [Cucurbita maxima])

HSP 1 Score: 200 bits (509), Expect = 9.96e-64
Identity = 100/133 (75.19%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 2   KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
           KNPAVS RPKSNGAN+F+I+V+DDQ+DYRGGSP   ISP R +SRIRR+LMRF+FY PSR
Sbjct: 3   KNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFPSR 62

Query: 62  GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
           GSS++ +++    A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63  GSSSSPSSS--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122

Query: 122 VDEGRISDANAMV 134
                ISDANAMV
Sbjct: 123 -----ISDANAMV 128

[Close]

BLAST of MELO3C011006.jh1 vs. NCBI nr
Match: KAG7029433.1 (hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197 bits (501), Expect = 3.06e-62
Identity = 99/133 (74.44%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 2   KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
           KNPAVS R KSNGAN+F+I+V+DDQ+DYRGGSP   ISPAR +SRIRR+LMRF+FY PSR
Sbjct: 3   KNPAVSIRQKSNGANSFIINVEDDQEDYRGGSPGVSISPARFLSRIRRILMRFMFYFPSR 62

Query: 62  GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
           GSS +++++    A K++NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63  GSSPSSSSS--IMASKRRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122

Query: 122 VDEGRISDANAMV 134
                ISDANAMV
Sbjct: 123 -----ISDANAMV 128

[Close]

BLAST of MELO3C011006.jh1 vs. NCBI nr
Match: KAG6598497.1 (hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (501), Expect = 3.06e-62
Identity = 99/133 (74.44%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 2   KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
           KNPAVS R KSNGAN+F+I+V+DDQ+D+RGGSP   ISPAR +SRIRR+LMRF+FY PSR
Sbjct: 3   KNPAVSIRQKSNGANSFIINVEDDQEDFRGGSPGVSISPARFLSRIRRILMRFMFYFPSR 62

Query: 62  GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
           GSS +++++    A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63  GSSPSSSSS--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122

Query: 122 VDEGRISDANAMV 134
                ISDANAMV
Sbjct: 123 -----ISDANAMV 128

[Close]

BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VC16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005050 PE=4 SV=1)

HSP 1 Score: 270 bits (689), Expect = 2.11e-91
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
           MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS
Sbjct: 1   MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60

Query: 61  RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
           RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI
Sbjct: 61  RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120

Query: 121 GVDEGRISDANAMV 134
           GVDEGRISDANAMV
Sbjct: 121 GVDEGRISDANAMV 134

[Close]

BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LPF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 4.90e-80
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
           MKNPAVSTRPKSNGAN+FV+HVKDDQDDYRGGSPA RISPARI+SRIRRV MRFIFYLPS
Sbjct: 1   MKNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPS 60

Query: 61  RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
           RGS+AAAAAA     LKQ+NLEKFEPPKTSCSSSYSSYSHYNEAIADCIEF NKSSQDQI
Sbjct: 61  RGSAAAAAAA-----LKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQI 120

Query: 121 GVDEGRISDANAMV 134
           GVDEGRISDANAMV
Sbjct: 121 GVDEGRISDANAMV 129

[Close]

BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KCK5 (uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057 PE=4 SV=1)

HSP 1 Score: 200 bits (509), Expect = 4.82e-64
Identity = 100/133 (75.19%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 2   KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
           KNPAVS RPKSNGAN+F+I+V+DDQ+DYRGGSP   ISP R +SRIRR+LMRF+FY PSR
Sbjct: 3   KNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFPSR 62

Query: 62  GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
           GSS++ +++    A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63  GSSSSPSSS--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122

Query: 122 VDEGRISDANAMV 134
                ISDANAMV
Sbjct: 123 -----ISDANAMV 128

[Close]

BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CRC4 (uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014042 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 3.47e-53
Identity = 93/134 (69.40%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 2   KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
           +NP V    K NGA+ FVIHV+D Q+DYRGGS    +SPARI+SRIRR+ MRFIFY PSR
Sbjct: 5   ENPTVPISHKPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSR 64

Query: 62  GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSS-QDQI 121
           GSS++     P  A +Q+NLEKFEPPKTSCSS+YSSYSHY+EAIADCIEFFNKSS Q+QI
Sbjct: 65  GSSSS-----PIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQI 124

Query: 122 GVDEGRISDANAMV 134
           GV  GR SD NAMV
Sbjct: 125 GVG-GRNSDGNAMV 131

[Close]

BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match: A0A6A1UJQ7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G024766 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.21e-31
Identity = 66/123 (53.66%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 15  ANTFVIHVKDDQDDYRGGSPAP--------RISPARIMSRIRRVLMRFIFYLPSRGSSAA 74
           A +FVI V+  +   R  +P            S  ++ +R R++LMR +F LPSRGSSAA
Sbjct: 8   AESFVIQVRGCEAVDRHQAPHQTSVDSSEFNFSAMKLFNRFRKILMRLLFSLPSRGSSAA 67

Query: 75  AAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIGVDEGR 129
           +      TA +QKN ++FEPPKTSCSS YSS+SHYNEAIADCIEFFNKSS D+I +D+GR
Sbjct: 68  SG----MTASRQKNCDRFEPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSHDEI-LDDGR 125

[Close]

BLAST of MELO3C011006.jh1 vs. TAIR 10
Match: AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 9.4e-10
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 42  RIMSRIRRVLMR---FIFYLPSRGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSS-YSS 101
           ++  ++ ++LMR   F  +  SR      + +G        + E+FEPPK SCSSS YSS
Sbjct: 2   KLFHKLGKILMRLIDFTLHSSSRRQKKNNSRSG--------DGERFEPPKISCSSSYYSS 61

Query: 102 YSHYNEAIADCIEFFNKSSQDQIGVDEGRI 128
           + HY+EAIADCIEFFNKSS       E R+
Sbjct: 62  HVHYSEAIADCIEFFNKSSAMSCEDHEARL 83

The following BLAST results are available for this feature:

BLAST of MELO3C011006.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065168.1	4.35e-91	100.00	hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa]	[more]
KAE8652124.1	6.80e-79	90.23	hypothetical protein Csa_022629 [Cucumis sativus]	[more]
XP_022996993.1	9.96e-64	75.19	uncharacterized protein LOC111492057 [Cucurbita maxima]	[more]
KAG7029433.1	3.06e-62	74.44	hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598497.1	3.06e-62	74.44	hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C011006.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC16	2.11e-91	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LPF9	4.90e-80	90.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1	[more]
A0A6J1KCK5	4.82e-64	75.19	uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057...	[more]
A0A6J1CRC4	3.47e-53	69.40	uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6A1UJQ7	1.21e-31	53.66	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G024766 PE=4 SV=1	[more]

BLAST of MELO3C011006.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75717.1	9.4e-10	43.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35111	F10A5.9-RELATED	coord: 15..130
None	No IPR available	PANTHER	PTHR35111:SF5	F10A5.9	coord: 15..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011006.jh1.t1	MELO3C011006.jh1.t1	mRNA