MELO3C010921 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010921
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	circumsporozoite protein-like
Location	chr03: 27635962 .. 27636527 (-)
RNA-Seq Expression	MELO3C010921
Synteny	MELO3C010921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTTAGCTATAAAAAAGCCCATTTACTTCTCCGCTCCGTACGGTCTTTCACACATCATTCCGCCACCTGCGCCGGGGGCGGCGGAGAGGTATACAGGAACGCAGAAGGAGGTGGCGGAGACAGAAACAGGAAGGCCGCGGGAGGACTCGGAGGCGGAAGCTTCGAAGATCTTGAGAAGAGTTTTGCAGGAGGTGGTGGCGAGAGGAAGAGGAATGCAGCCGGAGGACTGGGAGGCGGCGGAGAGGGTAGGAGATACGCAGCTTTGGAAGATTGCTTCAGCTCCGGGAATGTTACACGGGCGGCATGGACAAAGGAATGAGAGAAAAGGGAGAAAAGGAAAAGCAGAAAGAACCCTACAGCATTCATCTTTTCTTCTTCTCTATGATGATTATGATGAAAGATTATGTCTCAAATCAACACCTAATGTCAATTATTTATACTAACCCTTTTCCATATTTGGCATTAATTTTGTGTACCCATAAAATTAATTACCATAACTATTTGTATGTCCTTCTATTTTTGTAACAATGTATTGTAAAGAATAAAACTTTCCTTAACTAT

mRNA sequence

ATGGGCCTTAGCTATAAAAAAGCCCATTTACTTCTCCGCTCCGTACGGTCTTTCACACATCATTCCGCCACCTGCGCCGGGGGCGGCGGAGAGGTATACAGGAACGCAGAAGGAGGTGGCGGAGACAGAAACAGGAAGGCCGCGGGAGGACTCGGAGGCGGAAGCTTCGAAGATCTTGAGAAGAGTTTTGCAGGAGGTGGTGGCGAGAGGAAGAGGAATGCAGCCGGAGGACTGGGAGGCGGCGGAGAGGGTAGGAGATACGCAGCTTTGGAAGATTGCTTCAGCTCCGGGAATGTTACACGGGCGGCATGGACAAAGGAATGAGAGAAAAGGGAGAAAAGGAAAAGCAGAAAGAACCCTACAGCATTCATCTTTTCTTCTTCTCTATGATGATTATGATGAAAGATTATGTCTCAAATCAACACCTAATGTCAATTATTTATACTAACCCTTTTCCATATTTGGCATTAATTTTGTGTACCCATAAAATTAATTACCATAACTATTTGTATGTCCTTCTATTTTTGTAACAATGTATTGTAAAGAATAAAACTTTCCTTAACTAT

Coding sequence (CDS)

ATGGGCCTTAGCTATAAAAAAGCCCATTTACTTCTCCGCTCCGTACGGTCTTTCACACATCATTCCGCCACCTGCGCCGGGGGCGGCGGAGAGGTATACAGGAACGCAGAAGGAGGTGGCGGAGACAGAAACAGGAAGGCCGCGGGAGGACTCGGAGGCGGAAGCTTCGAAGATCTTGAGAAGAGTTTTGCAGGAGGTGGTGGCGAGAGGAAGAGGAATGCAGCCGGAGGACTGGGAGGCGGCGGAGAGGGTAGGAGATACGCAGCTTTGGAAGATTGCTTCAGCTCCGGGAATGTTACACGGGCGGCATGGACAAAGGAATGA

Protein sequence

MGLSYKKAHLLLRSVRSFTHHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNAAGGLGGGGEGRRYAALEDCFSSGNVTRAAWTKE

Homology

[Close]

BLAST of MELO3C010921 vs. NCBI nr
Match: XP_022975585.1 (circumsporozoite protein-like, partial [Cucurbita maxima])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 19 THHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNAAGG- 78
          +HHS  C GGGGE  RNA GGGG+  R AAGG       DL+K   GGGGE KRNAAGG 
Sbjct: 2  SHHSIGCGGGGGEGKRNAAGGGGEGKRNAAGG------GDLKKFRVGGGGEGKRNAAGGG 61

Query: 79 ------LGGGGEGRRYAA 90
                +GGGGEG+R AA
Sbjct: 62 DLKKFCVGGGGEGKRNAA 73

[Close]

BLAST of MELO3C010921 vs. NCBI nr
Match: XP_022975734.1 (sperm-activating peptides-like, partial [Cucurbita maxima])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 19 THHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNAAGG- 78
          +HHS  C GGGGE  RNA GGGG+  R AAGG       DL+K   GGGGE KRNAAGG 
Sbjct: 2  SHHSIGCGGGGGEGKRNAAGGGGEGKRNAAGG------GDLKKFRVGGGGEGKRNAAGGG 61

Query: 79 ------LGGGGEGRRYAA 90
                +GGGGEG+R AA
Sbjct: 62 DLKKFCVGGGGEGKRNAA 73

[Close]

BLAST of MELO3C010921 vs. NCBI nr
Match: XP_022974787.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 4.3e-07
Identity = 45/84 (53.57%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 13  RSVRSFTHHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKR 72
           R+    +HHS  C GGGGE  RNA GGGG+  R AAGG       DL+K   GGGGE KR
Sbjct: 79  RNAAKSSHHSIGCGGGGGEGKRNAAGGGGEGKRNAAGG------GDLKKFRIGGGGEGKR 138

Query: 73  NAAGG-------LGGGGEGRRYAA 90
           NAAG        +GGGGEG+R AA
Sbjct: 139 NAAGSGDLKKFCVGGGGEGKRNAA 156

[Close]

BLAST of MELO3C010921 vs. NCBI nr
Match: XP_023520925.1 (circumsporozoite protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-05
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 19 THHSATCAGGGGEVYRNAEGGGGDRNRKAAGG-------LGGGSFEDLEKSFAGGGGERK 78
          +HHSA C GGGGE  RNA GGG  +  ++ GG       +GGG   DL+K  +GGGGE K
Sbjct: 10 SHHSAGCGGGGGEGKRNAAGGGDLKKLRSGGGGERKRNAVGGG---DLKKLRSGGGGEGK 69

Query: 79 RNAAGG-------LGGGGEGRRYAA 90
          RNAAGG        GGGGEG+R AA
Sbjct: 70 RNAAGGGDLKKLRSGGGGEGKRNAA 91

[Close]

BLAST of MELO3C010921 vs. NCBI nr
Match: XP_023520928.1 (circumsporozoite protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.2 bits (139), Expect = 5.2e-05
Identity = 42/82 (51.22%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 15  VRSFTHHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNA 74
           +    +HSA C GGG E  RNA GGGG+  R A GG       DL+K +AG GGE KRNA
Sbjct: 33  IEEVCNHSAGCNGGGREGKRNAAGGGGEGKRNAIGG------GDLKKLWAGDGGEGKRNA 92

Query: 75  AGG-------LGGGGEGRRYAA 90
           AGG        GGGGEG+R  A
Sbjct: 93  AGGGDLKKLRAGGGGEGKRNTA 108

[Close]

BLAST of MELO3C010921 vs. ExPASy TrEMBL
Match: A0A6J1ILG0 (sperm-activating peptides-like OS=Cucurbita maxima OX=3661 GN=LOC111475967 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.1e-08
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 19 THHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNAAGG- 78
          +HHS  C GGGGE  RNA GGGG+  R AAGG       DL+K   GGGGE KRNAAGG 
Sbjct: 2  SHHSIGCGGGGGEGKRNAAGGGGEGKRNAAGG------GDLKKFRVGGGGEGKRNAAGGG 61

Query: 79 ------LGGGGEGRRYAA 90
                +GGGGEG+R AA
Sbjct: 62 DLKKFCVGGGGEGKRNAA 73

[Close]

BLAST of MELO3C010921 vs. ExPASy TrEMBL
Match: A0A6J1IH45 (circumsporozoite protein-like OS=Cucurbita maxima OX=3661 GN=LOC111475151 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.1e-08
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 19 THHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNAAGG- 78
          +HHS  C GGGGE  RNA GGGG+  R AAGG       DL+K   GGGGE KRNAAGG 
Sbjct: 2  SHHSIGCGGGGGEGKRNAAGGGGEGKRNAAGG------GDLKKFRVGGGGEGKRNAAGGG 61

Query: 79 ------LGGGGEGRRYAA 90
                +GGGGEG+R AA
Sbjct: 62 DLKKFCVGGGGEGKRNAA 73

[Close]

BLAST of MELO3C010921 vs. ExPASy TrEMBL
Match: A0A6J1IB81 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111473538 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07
Identity = 45/84 (53.57%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 13  RSVRSFTHHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKR 72
           R+    +HHS  C GGGGE  RNA GGGG+  R AAGG       DL+K   GGGGE KR
Sbjct: 79  RNAAKSSHHSIGCGGGGGEGKRNAAGGGGEGKRNAAGG------GDLKKFRIGGGGEGKR 138

Query: 73  NAAGG-------LGGGGEGRRYAA 90
           NAAG        +GGGGEG+R AA
Sbjct: 139 NAAGSGDLKKFCVGGGGEGKRNAA 156

[Close]

BLAST of MELO3C010921 vs. ExPASy TrEMBL
Match: A0A6J1HHF9 (circumsporozoite protein-like OS=Cucurbita moschata OX=3662 GN=LOC111462957 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.3e-05
Identity = 41/78 (52.56%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 19 THHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNAAGG- 78
          ++H+  C GGGGE  RN  GGGG+  R AAGG       D +K  AGGGGE KRNAAGG 
Sbjct: 5  SYHAVCCGGGGGEGKRNVVGGGGEGKRNAAGG------GDFKKLRAGGGGEGKRNAAGGG 64

Query: 79 ------LGGGGEGRRYAA 90
                 GGGGE +R AA
Sbjct: 65 DLKKLRGGGGGEVKRNAA 76

[Close]

BLAST of MELO3C010921 vs. ExPASy TrEMBL
Match: A0A6J1IGB4 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111473152 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.6e-05
Identity = 42/78 (53.85%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 19 THHSATCAGGGGEVYRNAEGGGGDRNRKAAGGLGGGSFEDLEKSFAGGGGERKRNAAGG- 78
          +HHS    GGGGE  RNA GGGG+  R AA G       DL+K   GGGGE KRNAAGG 
Sbjct: 21 SHHSIGYGGGGGEGKRNAAGGGGEGKRNAARG------GDLKKFRIGGGGEGKRNAAGGG 80

Query: 79 ------LGGGGEGRRYAA 90
                + GGGEG+R AA
Sbjct: 81 DLKKLCIEGGGEGKRNAA 92

The following BLAST results are available for this feature:

BLAST of MELO3C010921 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975585.1	1.5e-07	57.69	circumsporozoite protein-like, partial [Cucurbita maxima]	[more]
XP_022975734.1	1.5e-07	57.69	sperm-activating peptides-like, partial [Cucurbita maxima]	[more]
XP_022974787.1	4.3e-07	53.57	glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]	[more]
XP_023520925.1	1.4e-05	52.94	circumsporozoite protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_023520928.1	5.2e-05	51.22	circumsporozoite protein-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C010921 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C010921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILG0	7.1e-08	57.69	sperm-activating peptides-like OS=Cucurbita maxima OX=3661 GN=LOC111475967 PE=4 ...	[more]
A0A6J1IH45	7.1e-08	57.69	circumsporozoite protein-like OS=Cucurbita maxima OX=3661 GN=LOC111475151 PE=4 S...	[more]
A0A6J1IB81	2.1e-07	53.57	glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HHF9	7.3e-05	52.56	circumsporozoite protein-like OS=Cucurbita moschata OX=3662 GN=LOC111462957 PE=4...	[more]
A0A6J1IGB4	9.6e-05	53.85	glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of MELO3C010921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010921.1	MELO3C010921.1	mRNA