MELO3C010840 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010840
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ethylene-responsive transcription factor RAP2-1
Location	chr03: 28145674 .. 28146832 (-)
RNA-Seq Expression	MELO3C010840
Synteny	MELO3C010840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCTCCTAAGCTTACCTTAGTTAGTTCATGGATGCTCCATAAAATAATTATGCAATTTGCAATTCCTTCCTCTTTCTTTTTTTCTAATAAAAGTACCAAAAAAAGAGAGAGAGATCAAATTGTTAGATTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGAGTTTGTCCCTTCACCTCTCGACGACGTGGTGGCCGTCACCAATTCTCTATTTCACACACTCCCTCTCTTCCTCTAATTATTTACATATAAAACAAATACGCACGCACACACCCAACTTCATTCCTTCCCCTGTTATCAAACGCCGACCCCTCCAGTACTCCAATTCCAAGTCTTTCTCTTCCACTTTTCCTTCACTCTCCTTCCGGACTTGGTCTCTTCATAATCCTTTTCTTTCTTTCTATATTATTCCATACTATGGTTGTTCTATAATTTGCTCTCATACACTCATACCATGGAAGAGTCCGTAGACACCACTATTCCGGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCCGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGCCCATCCGCCCGTCTCAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTCGACGTTTCACCTTCTTCAATTCGAAAAAGAGCGATTGAGGTCGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCCGACAAGCCCGACTTGAACCAGTTTCCAGACCCAGAAAGCTCTGATGAAGATTAATCGACGATCACTGTTTCATAGCCTTTTCCACTTCTGTATTTACCCCCTGTTTTTTCTTTCCCATATCTCCCACTCCGAAAAGAGATTCAAATCCTGGGGATTTTGGAAATTAAAATTGGAATGGACCCATATGGTTCCCTTCTTGATTTGCTATATATCTAAAAATATAGCTTCGAATTTGTAAACAGGGGTGATGGTAAACCAAATATGTTGATCGATCCCTACAGTAATCTATCTTAATTTGTTATCTTTCCTGCAT

mRNA sequence

ATCCTCCTAAGCTTACCTTAGTTAGTTCATGGATGCTCCATAAAATAATTATGCAATTTGCAATTCCTTCCTCTTTCTTTTTTTCTAATAAAAGTACCAAAAAAAGAGAGAGAGATCAAATTGTTAGATTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGAGTTTGTCCCTTCACCTCTCGACGACGTGGTGGCCGTCACCAATTCTCTATTTCACACACTCCCTCTCTTCCTCTAATTATTTACATATAAAACAAATACGCACGCACACACCCAACTTCATTCCTTCCCCTGTTATCAAACGCCGACCCCTCCAGTACTCCAATTCCAAGTCTTTCTCTTCCACTTTTCCTTCACTCTCCTTCCGGACTTGGTCTCTTCATAATCCTTTTCTTTCTTTCTATATTATTCCATACTATGGTTGTTCTATAATTTGCTCTCATACACTCATACCATGGAAGAGTCCGTAGACACCACTATTCCGGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCCGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGCCCATCCGCCCGTCTCAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTCGACGTTTCACCTTCTTCAATTCGAAAAAGAGCGATTGAGGTCGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCCGACAAGCCCGACTTGAACCAGTTTCCAGACCCAGAAAGCTCTGATGAAGATTAATCGACGATCACTGTTTCATAGCCTTTTCCACTTCTGTATTTACCCCCTGTTTTTTCTTTCCCATATCTCCCACTCCGAAAAGAGATTCAAATCCTGGGGATTTTGGAAATTAAAATTGGAATGGACCCATATGGTTCCCTTCTTGATTTGCTATATATCTAAAAATATAGCTTCGAATTTGTAAACAGGGGTGATGGTAAACCAAATATGTTGATCGATCCCTACAGTAATCTATCTTAATTTGTTATCTTTCCTGCAT

Coding sequence (CDS)

ATGGAAGAGTCCGTAGACACCACTATTCCGGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCCGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGCCCATCCGCCCGTCTCAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTCGACGTTTCACCTTCTTCAATTCGAAAAAGAGCGATTGAGGTCGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCCGACAAGCCCGACTTGAACCAGTTTCCAGACCCAGAAAGCTCTGATGAAGATTAA

Protein sequence

MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPDPESSDED

Homology

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BLAST of MELO3C010840 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA0060919.1 ethylene-responsive transcription factor RAP2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 2.9e-72
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60
           MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 121 SKPISDKPDLNQFPDPESSDED 143
           SKPISDKPDLNQFPDPESSDED
Sbjct: 121 SKPISDKPDLNQFPDPESSDED 142

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BLAST of MELO3C010840 vs. NCBI nr
Match: XP_004142875.1 (ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hypothetical protein Csa_018768 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 5.5e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60
           MEESV+TTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVETTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 121 SKPISDKPDLNQFPDPESSDED 143
           SKPISDKPDLNQFPDPESS ED
Sbjct: 121 SKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of MELO3C010840 vs. NCBI nr
Match: XP_038884237.1 (ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 4.7e-70
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MEESVDTTIPEKRK-QSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           MEESV+TTIPEKRK Q+GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEESVETTIPEKRKQQTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120

Query: 121 QSKPISDKPDLNQFPDPESSDED 143
           QSKPISDKPDLNQFPDPESSDED
Sbjct: 121 QSKPISDKPDLNQFPDPESSDED 143

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BLAST of MELO3C010840 vs. NCBI nr
Match: KAG7029328.1 (Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 88  MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 147

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 148 RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 207

Query: 121 QSKPISDKPDLNQFPDPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 208 QSKPISEKPDLNQFPEPESSDED 230

[Close]

BLAST of MELO3C010840 vs. NCBI nr
Match: XP_022962377.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_023545716.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita pepo subsp. pepo] >KAG6598357.1 Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120

Query: 121 QSKPISDKPDLNQFPDPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISEKPDLNQFPEPESSDED 143

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BLAST of MELO3C010840 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.6e-39
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQE--------KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           ME   + +   KR+Q  ++E        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 61  TTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGAR 120
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 121 VDA--AAHQTSLRQSKPISDKPDLNQFPD 136
           VDA  A+   S+  S P   KPDLNQ P+
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

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BLAST of MELO3C010840 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-33
Identity = 86/177 (48.59%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 6   DTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTA 65
           D  +P  RK    +++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTA
Sbjct: 8   DVAVPGTRK----RDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTA 67

Query: 66  VFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA------------ 125
           VFYLRGP+ARLNFP+L L        D+S ++IRK+A EVGA+VDA              
Sbjct: 68  VFYLRGPTARLNFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFG 127

Query: 126 ----------------------------HQTSLRQSKPISDKPDLNQFPDPESSDED 143
                                           LR    + D+ DLN+ PDPESSDE+
Sbjct: 128 QNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of MELO3C010840 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-33
Identity = 80/138 (57.97%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60
           ++E +  T   KR      EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T +AAAR
Sbjct: 14  VKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAAR 73

Query: 61  AYDTAVFYLRGPSARLNFPDLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAAHQTS 120
           AYDTAVFYLRGPSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      
Sbjct: 74  AYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----E 133

Query: 121 LRQSKPISDKPDLNQFPD 136
           LR    + +  D+N+ P+
Sbjct: 134 LRLENRMVENLDMNKLPE 146

[Close]

BLAST of MELO3C010840 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-33
Identity = 80/146 (54.79%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 18  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 77
           R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLN
Sbjct: 23  RDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 82

Query: 78  FPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDAAAH-----------------QT 137
           FP+L+    + +   +  D+S + IR++A EVGA+VDA                    + 
Sbjct: 83  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKIEN 142

Query: 138 SLRQSKPISDKPDLNQFPDPESSDED 143
             +      ++ DLN+ PDPE+SD D
Sbjct: 143 CRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of MELO3C010840 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.2e-33
Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 18  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 77
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 78  FPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK-------- 137
           FP+L+         D+S ++IRK+A EVGA+VDA  A    + ++ +  S K        
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 138 --PDLNQFPDPESSDED 143
              DLN+ PDPE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

[Close]

BLAST of MELO3C010840 vs. ExPASy TrEMBL
Match: A0A5A7V5C8 (Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00520 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60
           MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 121 SKPISDKPDLNQFPDPESSDED 143
           SKPISDKPDLNQFPDPESSDED
Sbjct: 121 SKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of MELO3C010840 vs. ExPASy TrEMBL
Match: A0A1S3BAR1 (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60
           MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 121 SKPISDKPDLNQFPDPESSDED 143
           SKPISDKPDLNQFPDPESSDED
Sbjct: 121 SKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of MELO3C010840 vs. ExPASy TrEMBL
Match: A0A0A0LR87 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60
           MEESV+TTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVETTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 121 SKPISDKPDLNQFPDPESSDED 143
           SKPISDKPDLNQFPDPESS ED
Sbjct: 121 SKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of MELO3C010840 vs. ExPASy TrEMBL
Match: A0A6J1HCJ9 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111462838 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120

Query: 121 QSKPISDKPDLNQFPDPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of MELO3C010840 vs. ExPASy TrEMBL
Match: A0A6J1KB24 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111492253 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 132/143 (92.31%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIR+RAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRTSLR 120

Query: 121 QSKPISDKPDLNQFPDPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of MELO3C010840 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 161.4 bits (407), Expect = 5.4e-40
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQE--------KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           ME   + +   KR+Q  ++E        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 61  TTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGAR 120
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 121 VDA--AAHQTSLRQSKPISDKPDLNQFPD 136
           VDA  A+   S+  S P   KPDLNQ P+
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of MELO3C010840 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 144.1 bits (362), Expect = 8.9e-35
Identity = 86/177 (48.59%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 6   DTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTA 65
           D  +P  RK    +++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTA
Sbjct: 8   DVAVPGTRK----RDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTA 67

Query: 66  VFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA------------ 125
           VFYLRGP+ARLNFP+L L        D+S ++IRK+A EVGA+VDA              
Sbjct: 68  VFYLRGPTARLNFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFG 127

Query: 126 ----------------------------HQTSLRQSKPISDKPDLNQFPDPESSDED 143
                                           LR    + D+ DLN+ PDPESSDE+
Sbjct: 128 QNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of MELO3C010840 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 80/138 (57.97%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60
           ++E +  T   KR      EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T +AAAR
Sbjct: 14  VKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAAR 73

Query: 61  AYDTAVFYLRGPSARLNFPDLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAAHQTS 120
           AYDTAVFYLRGPSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      
Sbjct: 74  AYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----E 133

Query: 121 LRQSKPISDKPDLNQFPD 136
           LR    + +  D+N+ P+
Sbjct: 134 LRLENRMVENLDMNKLPE 146

[Close]

BLAST of MELO3C010840 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-34
Identity = 80/146 (54.79%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 18  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 77
           R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLN
Sbjct: 23  RDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 82

Query: 78  FPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDAAAH-----------------QT 137
           FP+L+    + +   +  D+S + IR++A EVGA+VDA                    + 
Sbjct: 83  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKIEN 142

Query: 138 SLRQSKPISDKPDLNQFPDPESSDED 143
             +      ++ DLN+ PDPE+SD D
Sbjct: 143 CRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of MELO3C010840 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-34
Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 18  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 77
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 78  FPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK-------- 137
           FP+L+         D+S ++IRK+A EVGA+VDA  A    + ++ +  S K        
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 138 --PDLNQFPDPESSDED 143
              DLN+ PDPE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

The following BLAST results are available for this feature:

BLAST of MELO3C010840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444599.1	2.9e-72	100.00	PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA00...	[more]
XP_004142875.1	5.5e-71	98.59	ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hy...	[more]
XP_038884237.1	4.7e-70	97.90	ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]	[more]
KAG7029328.1	2.4e-66	93.01	Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma...	[more]
XP_022962377.1	2.4e-66	93.01	ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_02...	[more]

BLAST of MELO3C010840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC30	7.6e-39	59.73	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	1.3e-33	48.59	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	1.6e-33	57.97	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	4.8e-33	54.79	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	6.2e-33	56.93	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO3C010840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5C8	1.4e-72	100.00	Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BAR1	1.4e-72	100.00	ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LR87	2.7e-71	98.59	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=...	[more]
A0A6J1HCJ9	1.2e-66	93.01	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KB24	2.6e-66	92.31	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of MELO3C010840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46768.1	5.4e-40	59.73	related to AP2 1	[more]
AT5G67190.1	8.9e-35	48.59	DREB and EAR motif protein 2	[more]
AT4G06746.1	1.2e-34	57.97	related to AP2 9	[more]
AT2G23340.1	3.4e-34	54.79	DREB and EAR motif protein 3	[more]
AT3G50260.1	4.4e-34	56.93	cooperatively regulated by ethylene and jasmonate 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 61..81 score: 52.99 coord: 23..34 score: 64.24
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 22..85 e-value: 6.8E-35 score: 131.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..71 e-value: 1.3E-11 score: 44.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 22..79 score: 22.207401
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..81 e-value: 1.54127E-28 score: 97.7274
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..80 e-value: 1.2E-24 score: 88.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..140
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..140
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 22..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010840.1	MELO3C010840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity