MELO3C010774 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010774
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Zinc finger CCCH domain-containing protein 20
Location	chr03: 28568077 .. 28569390 (+)
RNA-Seq Expression	MELO3C010774
Synteny	MELO3C010774

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTAACCGACCGCGGTTGAAAACCAAAAATCCCTCCACCCTCTCTTCCGGCTTCCGTCTCAAAAACTGGCACTTCCCATCCCATCTTCAAAAACCCTTCCACTCCATTTCTCTCTCACAACTCACCATGATCGCCGAATCAATGCTCCTCAATCCCACGGCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCGCCGCAATCTCTTCCTATTTCTCCGCCGGCCACGTGTCCCCCCTCGATTCCCCAACGGCGGCGCTCATGGATTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGGCTTCTCGTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCGTGCGCTCGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCCAGGAAGTTCAACTATTCAGGCGCCGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAGGGAGATGCCTGCGAGTACGCTCATGGAACTTTCGAAATTTGGCTCCACCCAGACCGATACCGGACACAACCTTGCCGTGACGGAACTGGCTGTCGACGGCGGGTCTGTTTTCTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTGTCATCGCCGACGTCGATCCTGTTATCGCCGTCTTCGGACTCGCCGCCTCTGTCTCCAATCAGCCCTGTAATCAGTGGCGGCGAATCATCCAGCCGATTAGTTGCATTGATGCACAGCCTCCGCCTGGATGAATTAAAAACAAATCCTGGAGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAACTCCGGTGCATTTGATCTGTGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTGGAATCAGGAAGAAATCTAAGAGCCCAAATGTACGCGAAATTAATGAGAGAGAATTCAGTGGACCGAGTCCGGCCACTGATATCAGCCGGATCTCAGAACTAATTCGAGGAAGAAGAAGAAGAAGAAGCCATGGATTCGAATTTTTACTTTAATTGAGTTTCTGTGAATCAAATCCTTTTCCTCCCATTTCTTTTTTTCTTCTTCTTTTTTTTCGTATTTCGTATTTTTAGTTTCTACTAATTTCTGTAAATGGGTTTAATGTTAATTTGTGGAGGTGAGTGAGTTACAATTTCCCCCCCATTTGTACAGAAACTGAATGGGAATTTAATAAAATTTCTTTCTCGACTATAATATAATATGAAGATCG

mRNA sequence

GAGTAACCGACCGCGGTTGAAAACCAAAAATCCCTCCACCCTCTCTTCCGGCTTCCGTCTCAAAAACTGGCACTTCCCATCCCATCTTCAAAAACCCTTCCACTCCATTTCTCTCTCACAACTCACCATGATCGCCGAATCAATGCTCCTCAATCCCACGGCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCGCCGCAATCTCTTCCTATTTCTCCGCCGGCCACGTGTCCCCCCTCGATTCCCCAACGGCGGCGCTCATGGATTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGGCTTCTCGTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCGTGCGCTCGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCCAGGAAGTTCAACTATTCAGGCGCCGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAGGGAGATGCCTGCGAGTACGCTCATGGAACTTTCGAAATTTGGCTCCACCCAGACCGATACCGGACACAACCTTGCCGTGACGGAACTGGCTGTCGACGGCGGGTCTGTTTTCTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTGTCATCGCCGACGTCGATCCTGTTATCGCCGTCTTCGGACTCGCCGCCTCTGTCTCCAATCAGCCCTGTAATCAGTGGCGGCGAATCATCCAGCCGATTAGTTGCATTGATGCACAGCCTCCGCCTGGATGAATTAAAAACAAATCCTGGAGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAACTCCGGTGCATTTGATCTGTGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTGGAATCAGGAAGAAATCTAAGAGCCCAAATGTACGCGAAATTAATGAGAGAGAATTCAGTGGACCGAGTCCGGCCACTGATATCAGCCGGATCTCAGAACTAATTCGAGGAAGAAGAAGAAGAAGAAGCCATGGATTCGAATTTTTACTTTAATTGAGTTTCTGTGAATCAAATCCTTTTCCTCCCATTTCTTTTTTTCTTCTTCTTTTTTTTCGTATTTCGTATTTTTAGTTTCTACTAATTTCTGTAAATGGGTTTAATGTTAATTTGTGGAGGTGAGTGAGTTACAATTTCCCCCCCATTTGTACAGAAACTGAATGGGAATTTAATAAAATTTCTTTCTCGACTATAATATAATATGAAGATCG

Coding sequence (CDS)

ATGATCGCCGAATCAATGCTCCTCAATCCCACGGCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCGCCGCAATCTCTTCCTATTTCTCCGCCGGCCACGTGTCCCCCCTCGATTCCCCAACGGCGGCGCTCATGGATTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGGCTTCTCGTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCGTGCGCTCGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCCAGGAAGTTCAACTATTCAGGCGCCGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAGGGAGATGCCTGCGAGTACGCTCATGGAACTTTCGAAATTTGGCTCCACCCAGACCGATACCGGACACAACCTTGCCGTGACGGAACTGGCTGTCGACGGCGGGTCTGTTTTCTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTGTCATCGCCGACGTCGATCCTGTTATCGCCGTCTTCGGACTCGCCGCCTCTGTCTCCAATCAGCCCTGTAATCAGTGGCGGCGAATCATCCAGCCGATTAGTTGCATTGATGCACAGCCTCCGCCTGGATGA

Protein sequence

MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLPAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFLRPHVGATPDSGETKCQVSTGERNRCPCCVIADVDPVIAVFGLAASVSNQPCNQWRRIIQPISCIDAQPPPG

Homology

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BLAST of MELO3C010774 vs. NCBI nr
Match: KAA0060981.1 (zinc finger CCCH domain-containing protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

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BLAST of MELO3C010774 vs. NCBI nr
Match: XP_008444505.1 (PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. NCBI nr
Match: NP_001295793.1 (zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >CAI30889.1 putative CCCH-type zinc finger protein CsSEF1 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. NCBI nr
Match: KGN62412.1 (hypothetical protein Csa_018765 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. NCBI nr
Match: KAG7029281.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.9 bits (816), Expect = 3.6e-83
Identity = 141/163 (86.50%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MI ESM LNPT HIS+WDSLDDP+AAI SYF+AG+VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VD F+CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKF YSG ECPDLR
Sbjct: 61  AMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFKYSGTECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCF
Sbjct: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCF 163

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BLAST of MELO3C010774 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-52
Identity = 99/171 (57.89%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 1   MIAESML-LNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDL 60
           MI ES    NPT HI  W   +D + +   Y S    S +    A L  +  S   DPD 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  -------PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYS 120
                   +P+D ++CD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           G  CP+ R GCCK+GDACE++HG FE WLHP RYRTQPC+DG  CRRRVCF
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCF 171

[Close]

BLAST of MELO3C010774 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-52
Identity = 95/173 (54.91%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 9   NPTAHISTWDSLDDPSAAISSYFSAGHVSPLD----SPTAALMDFDS--------SLWED 68
           +PT HI  WD ++DP+A ISS FS+ +++ ++    SP+  L  F S         L  D
Sbjct: 11  HPTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTND 70

Query: 69  PDLPAP------VDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 128
            D  +        D FS D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+
Sbjct: 71  SDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFH 130

Query: 129 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           YSG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CF
Sbjct: 131 YSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICF 183

[Close]

BLAST of MELO3C010774 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.1e-50
Identity = 84/115 (73.04%), Postives = 94/115 (81.74%), Query Frame = 0


Query: 59  LPAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPD 118
           + A VD ++CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPRK++YSG  CPD
Sbjct: 65  MAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPD 124

Query: 119 LRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFLRPHVGATPD 174
            R G CK+GDACEYAHG FE WLHP RYRTQPC+DGT CRRRVCF       TPD
Sbjct: 125 FRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFF----AHTPD 175

[Close]

BLAST of MELO3C010774 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.3e-50
Identity = 96/173 (55.49%), Postives = 113/173 (65.32%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWED---- 60
           MI E+    PT  I  W  L++     S +FS    SP  S   AL      L  +    
Sbjct: 2   MIGETRRTYPTVEIPPWPVLEE--LTTSEFFSPVMNSPDCSMLEALAGLQRYLPSNEPDP 61

Query: 61  ---PDL---PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 120
              PDL    +P+D +SCD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++
Sbjct: 62  ESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYH 121

Query: 121 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           YSG  CPD R G CKKGD+CE+AHG FE WLHP RYRTQPC+DG  C R++CF
Sbjct: 122 YSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICF 172

[Close]

BLAST of MELO3C010774 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 82/113 (72.57%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VD ++CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPR++ YSG  CPD R
Sbjct: 68  AAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFR 127

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFLRPHVGATPD 174
            G CK+GDACE+AHG FE WLHP RYRTQPC+DGT CRRRVCF       TPD
Sbjct: 128 KGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFF----AHTPD 176

[Close]

BLAST of MELO3C010774 vs. ExPASy TrEMBL
Match: A0A5A7V5C0 (Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001160 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.2e-96
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. ExPASy TrEMBL
Match: A0A1S3BBA7 (LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103487803 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.2e-96
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. ExPASy TrEMBL
Match: Q5NDD3 (Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus OX=3659 GN=se2c5 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.0e-93
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. ExPASy TrEMBL
Match: A0A0A0LNN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352420 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.0e-93
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. ExPASy TrEMBL
Match: A0A6J1HCT8 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111462347 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 140/163 (85.89%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MI ESM LNPT HIS+WDSLDDP+AAI SYF+A +VSPLDSPTAA+MD+DS LWED DLP
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VD F+CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  AMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCF
Sbjct: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCF 163

[Close]

BLAST of MELO3C010774 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 95/173 (54.91%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 9   NPTAHISTWDSLDDPSAAISSYFSAGHVSPLD----SPTAALMDFDS--------SLWED 68
           +PT HI  WD ++DP+A ISS FS+ +++ ++    SP+  L  F S         L  D
Sbjct: 11  HPTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTND 70

Query: 69  PDLPAP------VDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 128
            D  +        D FS D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+
Sbjct: 71  SDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFH 130

Query: 129 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           YSG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CF
Sbjct: 131 YSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICF 183

[Close]

BLAST of MELO3C010774 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 99/171 (57.89%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 1   MIAESML-LNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDL 60
           MI ES    NPT HI  W   +D + +   Y S    S +    A L  +  S   DPD 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  -------PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYS 120
                   +P+D ++CD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           G  CP+ R GCCK+GDACE++HG FE WLHP RYRTQPC+DG  CRRRVCF
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCF 171

[Close]

BLAST of MELO3C010774 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 95/173 (54.91%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 9   NPTAHISTWDSLDDPSAAISSYFSAGHVSPLD----SPTAALMDFDS--------SLWED 68
           +PT HI  WD ++DP+A ISS FS+ +++ ++    SP+  L  F S         L  D
Sbjct: 11  HPTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTND 70

Query: 69  PDLPAP------VDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 128
            D  +        D FS D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+
Sbjct: 71  SDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFH 130

Query: 129 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           YSG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CF
Sbjct: 131 YSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICF 183

[Close]

BLAST of MELO3C010774 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 198.4 bits (503), Expect = 6.6e-51
Identity = 96/173 (55.49%), Postives = 113/173 (65.32%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWED---- 60
           MI E+    PT  I  W  L++     S +FS    SP  S   AL      L  +    
Sbjct: 2   MIGETRRTYPTVEIPPWPVLEE--LTTSEFFSPVMNSPDCSMLEALAGLQRYLPSNEPDP 61

Query: 61  ---PDL---PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 120
              PDL    +P+D +SCD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++
Sbjct: 62  ESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYH 121

Query: 121 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCF 164
           YSG  CPD R G CKKGD+CE+AHG FE WLHP RYRTQPC+DG  C R++CF
Sbjct: 122 YSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICF 172

[Close]

BLAST of MELO3C010774 vs. TAIR 10
Match: AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 74/155 (47.74%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 64  DGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLRH-G 123
           D ++ D FRM+EFK+R C R RSHDWT CP+AH GEKARRRDPR+F YSG  CP+ R  G
Sbjct: 76  DPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGG 135

Query: 124 CCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFLR---PHVGATPDSGETKC 183
            C +GD CE+AHG FE WLHP RYRT+ C+DG  C+R+VCF       +   P    +  
Sbjct: 136 DCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGV 195

Query: 184 QVSTGERNRCPCCVIADVDPVIAVFGLAASVSNQP 215
             S     + PCC+     P   + G  + +S  P
Sbjct: 196 SASPSPAAKNPCCLFCSSSPTSTLLGNLSHLSRSP 230

The following BLAST results are available for this feature:

BLAST of MELO3C010774 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060981.1	1.1e-95	100.00	zinc finger CCCH domain-containing protein 20 [Cucumis melo var. makuwa]	[more]
XP_008444505.1	1.1e-95	100.00	PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [C...	[more]
NP_001295793.1	1.5e-92	96.32	zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >CAI30889.1 puta...	[more]
KGN62412.1	1.5e-92	96.32	hypothetical protein Csa_018765 [Cucumis sativus]	[more]
KAG7029281.1	3.6e-83	86.50	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]

BLAST of MELO3C010774 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82199	2.6e-52	57.89	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82307	2.6e-52	54.91	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FU27	7.1e-50	73.04	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
Q9M0G2	9.3e-50	55.49	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6L4N4	1.7e-48	72.57	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of MELO3C010774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5C0	5.2e-96	100.00	Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BBA7	5.2e-96	100.00	LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 OS=Cucumis me...	[more]
Q5NDD3	7.0e-93	96.32	Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus OX=3659 GN=se2c...	[more]
A0A0A0LNN8	7.0e-93	96.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352420 PE=4 SV=1	[more]
A0A6J1HCT8	1.1e-82	85.89	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of MELO3C010774 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25900.1	1.9e-53	54.91	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G19810.1	1.9e-53	57.89	CCCH-type zinc finger family protein	[more]
AT2G25900.2	1.9e-53	54.91	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	6.6e-51	55.49	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G03790.1	1.1e-42	47.74	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1370.210		coord: 72..140 e-value: 1.3E-5 score: 27.2
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 7..164
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 7..164
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 110..137 score: 12.117198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010774.1	MELO3C010774.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding