MELO3C010770 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010770
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr03: 28592182 .. 28592403 (-)
RNA-Seq Expression	MELO3C010770
Synteny	MELO3C010770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTGAAGTCGGTTTCTTGTATGTATCAAGAACCAACAACTTACCCAGAATTCAAATCCGATCGAATTGAGGTGGAGCTTCAATCAGACGGAAATGGATGGAGAAAGAAAGCAAAAGGATATGAATCGTTGAAGAGAGTAAGAAGAAACGATGAAAGAGGAGAAATCGATAAGAGAACAACGGAATCGGGAGGAAAGAGAAGGAAGAAGAAGGGGTAA

mRNA sequence

ATGAAATTGAAGTCGGTTTCTTGTATGTATCAAGAACCAACAACTTACCCAGAATTCAAATCCGATCGAATTGAGGTGGAGCTTCAATCAGACGGAAATGGATGGAGAAAGAAAGCAAAAGGATATGAATCGTTGAAGAGAGTAAGAAGAAACGATGAAAGAGGAGAAATCGATAAGAGAACAACGGAATCGGGAGGAAAGAGAAGGAAGAAGAAGGGGTAA

Coding sequence (CDS)

ATGAAATTGAAGTCGGTTTCTTGTATGTATCAAGAACCAACAACTTACCCAGAATTCAAATCCGATCGAATTGAGGTGGAGCTTCAATCAGACGGAAATGGATGGAGAAAGAAAGCAAAAGGATATGAATCGTTGAAGAGAGTAAGAAGAAACGATGAAAGAGGAGAAATCGATAAGAGAACAACGGAATCGGGAGGAAAGAGAAGGAAGAAGAAGGGGTAA

Protein sequence

MKLKSVSCMYQEPTTYPEFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKRRKKKG

Homology

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BLAST of MELO3C010770 vs. NCBI nr
Match: KAA0060984.1 (hypothetical protein E6C27_scaffold501G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 9  MYQEPTTYPEFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKR 68
          MYQEPTTYPEFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKR
Sbjct: 1  MYQEPTTYPEFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKR 60

Query: 69 RKKKG 74
          RKKKG
Sbjct: 61 RKKKG 65

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BLAST of MELO3C010770 vs. NCBI nr
Match: KGN62408.1 (hypothetical protein Csa_018594 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 4.0e-17
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 18 EFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKRRKKKG 74
          + +SDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRT ESG KRRKKKG
Sbjct: 17 QIQSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTRESGRKRRKKKG 72

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BLAST of MELO3C010770 vs. ExPASy TrEMBL
Match: A0A5A7V0Y5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001190 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 9  MYQEPTTYPEFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKR 68
          MYQEPTTYPEFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKR
Sbjct: 1  MYQEPTTYPEFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKR 60

Query: 69 RKKKG 74
          RKKKG
Sbjct: 61 RKKKG 65

[Close]

BLAST of MELO3C010770 vs. ExPASy TrEMBL
Match: A0A0A0LKU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352380 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-17
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 18 EFKSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTTESGGKRRKKKG 74
          + +SDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRT ESG KRRKKKG
Sbjct: 17 QIQSDRIEVELQSDGNGWRKKAKGYESLKRVRRNDERGEIDKRTRESGRKRRKKKG 72

The following BLAST results are available for this feature:

BLAST of MELO3C010770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060984.1	2.1e-26	100.00	hypothetical protein E6C27_scaffold501G001190 [Cucumis melo var. makuwa]	[more]
KGN62408.1	4.0e-17	91.07	hypothetical protein Csa_018594 [Cucumis sativus]	[more]

BLAST of MELO3C010770 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C010770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0Y5	1.0e-26	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LKU8	2.0e-17	91.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352380 PE=4 SV=1	[more]

BLAST of MELO3C010770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010770.1	MELO3C010770.1	mRNA