MELO3C010741.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C010741.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	chr03: 29518559 .. 29520079 (-)
RNA-Seq Expression	MELO3C010741.jh1
Synteny	MELO3C010741.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTAATTTCAATGGATCAGATTGCTCTGACTCAGCTTGCCACCGGCCTGAGTGTGCTAGCTGGCGCCGTGGTCGTGAAGTCTGTCATCGAACAGAAACTACCGATGGCTGGGTCGATGCCGAGGTGTCCGACATGTAAAGGGTCGGGTCGGGTCACGTGTCTATGTGTCCGGTGGTCGGATGGAGATGTTGGGTGCCGTTCATGTTCAGGGTCGGGTCGGATGTCGTGTAGAAGTTGTGGTGGCGGTGGGAGAGGACGACCGATCTCCGTACAATTGTCGACGAGCCAATCCCACCGATGATTTTGAATGTTTTTTTTTTCTTATTTGAATTTGGATGGTGATGAATTATGTTCATGTGGATGATTTAAGCAACTTAAATATTTGTAATGTAAAGAAAAAGTATATATTTATCTGTTTATAGCAAA

mRNA sequence

TTCTCTAATTTCAATGGATCAGATTGCTCTGACTCAGCTTGCCACCGGCCTGAGTGTGCTAGCTGGCGCCGTGGTCGTGAAGTCTGTCATCGAACAGAAACTACCGATGGCTGGGTCGATGCCGAGGTGTCCGACATGTAAAGGGTCGGGTCGGGTCACGTGTCTATGTGTCCGGTGGTCGGATGGAGATGTTGGGTGCCGTTCATGTTCAGGGTCGGGTCGGATGTCGTGTAGAAGTTGTGGTGGCGGTGGGAGAGGACGACCGATCTCCGTACAATTGTCGACGAGCCAATCCCACCGATGATTTTGAATGTTTTTTTTTTCTTATTTGAATTTGGATGGTGATGAATTATGTTCATGTGGATGATTTAAGCAACTTAAATATTTGTAATGTAAAGAAAAAGTATATATTTATCTGTTTATAGCAAA

Coding sequence (CDS)

ATGGATCAGATTGCTCTGACTCAGCTTGCCACCGGCCTGAGTGTGCTAGCTGGCGCCGTGGTCGTGAAGTCTGTCATCGAACAGAAACTACCGATGGCTGGGTCGATGCCGAGGTGTCCGACATGTAAAGGGTCGGGTCGGGTCACGTGTCTATGTGTCCGGTGGTCGGATGGAGATGTTGGGTGCCGTTCATGTTCAGGGTCGGGTCGGATGTCGTGTAGAAGTTGTGGTGGCGGTGGGAGAGGACGACCGATCTCCGTACAATTGTCGACGAGCCAATCCCACCGATGA

Protein sequence

MDQIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR

Homology

[Close]

BLAST of MELO3C010741.jh1 vs. NCBI nr
Match: KAA0061011.1 (uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 2.02e-59
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 25  KIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC 84
           +IALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC
Sbjct: 3   QIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC 62

Query: 85  RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 118
           RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR
Sbjct: 63  RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 96

[Close]

BLAST of MELO3C010741.jh1 vs. NCBI nr
Match: XP_004142934.1 (uncharacterized protein LOC101220122 [Cucumis sativus])

HSP 1 Score: 179 bits (454), Expect = 4.58e-56
Identity = 88/94 (93.62%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 25  KIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC 84
           +IAL+QLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTC+CVRWSDGDVGC
Sbjct: 3   QIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDVGC 62

Query: 85  RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 118
           RSCSGSGRMSCRSCGGGGRGRPI+VQLS SQS+R
Sbjct: 63  RSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSNR 96

[Close]

BLAST of MELO3C010741.jh1 vs. NCBI nr
Match: KAG6585227.1 (hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020147.1 hypothetical protein SDJN02_16829, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159 bits (402), Expect = 4.00e-48
Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 26  IALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGCR 85
           IAL+Q+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTCLCVRWSDGDVGCR
Sbjct: 4   IALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCR 63

Query: 86  SCSGSGRMSCRSCGGGGRGRPISVQLSTSQ 115
           SCSGSGRMSCRSCGGGGRGRPI+VQLS SQ
Sbjct: 64  SCSGSGRMSCRSCGGGGRGRPITVQLSASQ 92

[Close]

BLAST of MELO3C010741.jh1 vs. NCBI nr
Match: XP_022132135.1 (uncharacterized protein LOC111005075 [Momordica charantia])

HSP 1 Score: 152 bits (385), Expect = 1.56e-45
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 26  IALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGCR 85
           + L QLATGLSV+AGAVVVKSV++QK PMAG +P CPTC GSGRVTC+CVRWSDGD GCR
Sbjct: 4   MGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPTCPTCNGSGRVTCICVRWSDGDFGCR 63

Query: 86  SCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 118
           SC+GSGRMSCRSCGGGGRGRPI+VQLS  Q +R
Sbjct: 64  SCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR 95

[Close]

BLAST of MELO3C010741.jh1 vs. NCBI nr
Match: KGN62638.2 (hypothetical protein Csa_018726 [Cucumis sativus])

HSP 1 Score: 151 bits (381), Expect = 5.45e-45
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 25  KIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC 84
           +IAL+QLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTC+CVRWSDGDVGC
Sbjct: 3   QIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDVGC 62

Query: 85  RSCSGSGRMSCRSCGG 100
           RSCSGSGRMSCRSCGG
Sbjct: 63  RSCSGSGRMSCRSCGG 78

[Close]

BLAST of MELO3C010741.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V5E2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001460 PE=4 SV=1)

HSP 1 Score: 187 bits (476), Expect = 9.79e-60
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 25  KIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC 84
           +IALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC
Sbjct: 3   QIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC 62

Query: 85  RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 118
           RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR
Sbjct: 63  RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 96

[Close]

BLAST of MELO3C010741.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1)

HSP 1 Score: 179 bits (454), Expect = 2.22e-56
Identity = 88/94 (93.62%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 25  KIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGC 84
           +IAL+QLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTC+CVRWSDGDVGC
Sbjct: 3   QIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDVGC 62

Query: 85  RSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 118
           RSCSGSGRMSCRSCGGGGRGRPI+VQLS SQS+R
Sbjct: 63  RSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSNR 96

[Close]

BLAST of MELO3C010741.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BRL0 (uncharacterized protein LOC111005075 OS=Momordica charantia OX=3673 GN=LOC111005075 PE=4 SV=1)

HSP 1 Score: 152 bits (385), Expect = 7.54e-46
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 26  IALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGCR 85
           + L QLATGLSV+AGAVVVKSV++QK PMAG +P CPTC GSGRVTC+CVRWSDGD GCR
Sbjct: 4   MGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPTCPTCNGSGRVTCICVRWSDGDFGCR 63

Query: 86  SCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 118
           SC+GSGRMSCRSCGGGGRGRPI+VQLS  Q +R
Sbjct: 64  SCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR 95

[Close]

BLAST of MELO3C010741.jh1 vs. ExPASy TrEMBL
Match: A0A7J7BXT5 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW22G00345 PE=4 SV=1)

HSP 1 Score: 139 bits (350), Expect = 1.67e-40
Identity = 67/97 (69.07%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 22  LNSKIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGD 81
           +   I LTQLATGLSVLAGA +VKSV++QK PMAG  PRCP+C G+GRVTCLC RWSDGD
Sbjct: 1   MGGPIVLTQLATGLSVLAGAALVKSVMDQK-PMAGQFPRCPSCNGTGRVTCLCNRWSDGD 60

Query: 82  VGCRSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 118
            GCR+C+GSGRM+C SCGG G GRP+ VQLS    +R
Sbjct: 61  AGCRTCAGSGRMACNSCGGSGTGRPLPVQLSVRPPNR 96

[Close]

BLAST of MELO3C010741.jh1 vs. ExPASy TrEMBL
Match: A0A5N6R398 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009371 PE=4 SV=1)

HSP 1 Score: 139 bits (349), Expect = 2.30e-40
Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 26  IALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVGCR 85
           I LTQLATGLSVLAGAV+VKSV++QK PMAG  PRCP+C G+GRVTCLC RWSDGDVGCR
Sbjct: 4   IVLTQLATGLSVLAGAVLVKSVMDQK-PMAGPFPRCPSCNGTGRVTCLCSRWSDGDVGCR 63

Query: 86  SCSGSGRMSCRSCGGGGRGRPISVQL 111
           +C+GSGRM CRSCGG G GRP+  QL
Sbjct: 64  ACAGSGRMGCRSCGGTGTGRPLPAQL 88

[Close]

BLAST of MELO3C010741.jh1 vs. TAIR 10
Match: AT5G43260.1 (chaperone protein dnaJ-related )

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-31
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 24  SKIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDVG 83
           S I +TQLATG+SVLAGAV +KSV++QK PMAG  PRCPTC G+GRVTC C RWSDGDVG
Sbjct: 2   SPIVITQLATGISVLAGAVFIKSVMDQK-PMAGQFPRCPTCNGTGRVTCFCSRWSDGDVG 61

Query: 84  CRSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 119
           CR CSGSGR +C +CGG G GRP+  Q++    +R
Sbjct: 62  CRRCSGSGRAACSNCGGSGTGRPLPAQITVQPPNR 95

The following BLAST results are available for this feature:

BLAST of MELO3C010741.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061011.1	2.02e-59	98.94	uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa]	[more]
XP_004142934.1	4.58e-56	93.62	uncharacterized protein LOC101220122 [Cucumis sativus]	[more]
KAG6585227.1	4.00e-48	90.00	hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022132135.1	1.56e-45	79.57	uncharacterized protein LOC111005075 [Momordica charantia]	[more]
KGN62638.2	5.45e-45	96.05	hypothetical protein Csa_018726 [Cucumis sativus]	[more]

BLAST of MELO3C010741.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C010741.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5E2	9.79e-60	98.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LKQ8	2.22e-56	93.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1	[more]
A0A6J1BRL0	7.54e-46	79.57	uncharacterized protein LOC111005075 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A7J7BXT5	1.67e-40	69.07	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW22G00345 ...	[more]
A0A5N6R398	2.30e-40	77.91	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009371 PE=4 SV=1	[more]

BLAST of MELO3C010741.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43260.1	1.3e-31	66.32	chaperone protein dnaJ-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..96
None	No IPR available	PANTHER	PTHR34687:SF1	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 2..94
None	No IPR available	PANTHER	PTHR34687	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 2..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010741.jh1.t2	MELO3C010741.jh1.t2	mRNA
MELO3C010741.jh1.t1	MELO3C010741.jh1.t1	mRNA