MELO3C010725 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010725
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	NADH-ubiquinone reductase complex 1 MLRQ subunit
Location	chr03: 28870477 .. 28871017 (+)
RNA-Seq Expression	MELO3C010725
Synteny	MELO3C010725

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACCGCCAACAGATGGTTAAAGCCCGAGGTTTTTTTTTTTTTTTTTTTCCTTTTCCTTTTCTGTAACTTTCTCTTTGGCTGCTGAGAAAAAACATGAAGAAAATAAGAAGTTTATCATTCAAAACTTGATAAATTCCTTGAATATATATGTTTGCAGGTGTATCCTCTCTTTGCTTCTGTTGGTGTGGCTGTTGGTATCTGTGTGATGCAGCTTGTTAGAAACATAACCACCAATCCTGAAGTCAGGTAAATATTTCCAAGTTCTAGGGAGAAAATATATATATATATATATATATATGATGTTCAATATAATGGAAAATGTAAATATTACGATCAAGAGAAGAGAAGAAAAGTGGTGTCCTGATTTGTTCTGAATGGAACATGACAGGGTTATCAAAGAGAGGAGAGCTGCTGGAGTGCTTGATAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGACTTAGGAAGTTCCTCAGAACAAGACCTCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCCGATCCAAACTAA

mRNA sequence

ATGGCTACCGCCAACAGATGGTTAAAGCCCGTGTATCCTCTCTTTGCTTCTGTTGGTGTGGCTGTTGGTATCTGTGTGATGCAGCTTGTTAGAAACATAACCACCAATCCTGAAGTCAGGGTTATCAAAGAGAGGAGAGCTGCTGGAGTGCTTGATAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGACTTAGGAAGTTCCTCAGAACAAGACCTCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCCGATCCAAACTAA

Coding sequence (CDS)

ATGGCTACCGCCAACAGATGGTTAAAGCCCGTGTATCCTCTCTTTGCTTCTGTTGGTGTGGCTGTTGGTATCTGTGTGATGCAGCTTGTTAGAAACATAACCACCAATCCTGAAGTCAGGGTTATCAAAGAGAGGAGAGCTGCTGGAGTGCTTGATAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGACTTAGGAAGTTCCTCAGAACAAGACCTCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCCGATCCAAACTAA

Protein sequence

MATANRWLKPVYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN

Homology

[Close]

BLAST of MELO3C010725 vs. NCBI nr
Match: XP_016900034.1 (PREDICTED: uncharacterized protein LOC107990723 [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 4.8e-41
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MATANRWLKP VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK
Sbjct: 1  MATANRWLKPEVYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. NCBI nr
Match: XP_004142944.1 (uncharacterized protein LOC101222643 [Cucumis sativus] >KGN62359.1 hypothetical protein Csa_018775 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.4e-40
Identity = 87/89 (97.75%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MATANRWLKP VYPLFASVGVAVGIC MQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK
Sbjct: 1  MATANRWLKPEVYPLFASVGVAVGICAMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. NCBI nr
Match: XP_022961943.1 (uncharacterized protein LOC111462563 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MATANRWLKP VYPLFA+VGVAVGIC MQLVRNITTNPEVRV KERRAAGVLDNFEEGEK
Sbjct: 1  MATANRWLKPEVYPLFATVGVAVGICGMQLVRNITTNPEVRVTKERRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. NCBI nr
Match: XP_023545968.1 (uncharacterized protein LOC111805233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 5.9e-39
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MATANRWLKP VYPLFA+VGVAVGIC MQLVRNITTNPEVRV K+RRAAGVLDNFEEGEK
Sbjct: 1  MATANRWLKPEVYPLFATVGVAVGICGMQLVRNITTNPEVRVTKQRRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. NCBI nr
Match: KAG6598267.1 (hypothetical protein SDJN03_08045, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169.9 bits (429), Expect = 1.0e-38
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          M TANRWLKP VYPLFA+VGVAVGIC MQLVRNITTNPEVRV KERRAAGVLDNFEEGEK
Sbjct: 1  MPTANRWLKPEVYPLFATVGVAVGICGMQLVRNITTNPEVRVTKERRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. ExPASy TrEMBL
Match: A0A1S4DVM4 (uncharacterized protein LOC107990723 OS=Cucumis melo OX=3656 GN=LOC107990723 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-41
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MATANRWLKP VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK
Sbjct: 1  MATANRWLKPEVYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. ExPASy TrEMBL
Match: A0A0A0LMX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350420 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.8e-41
Identity = 87/89 (97.75%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MATANRWLKP VYPLFASVGVAVGIC MQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK
Sbjct: 1  MATANRWLKPEVYPLFASVGVAVGICAMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. ExPASy TrEMBL
Match: A0A6J1HDB5 (uncharacterized protein LOC111462563 OS=Cucurbita moschata OX=3662 GN=LOC111462563 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MATANRWLKP VYPLFA+VGVAVGIC MQLVRNITTNPEVRV KERRAAGVLDNFEEGEK
Sbjct: 1  MATANRWLKPEVYPLFATVGVAVGICGMQLVRNITTNPEVRVTKERRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTRPPQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. ExPASy TrEMBL
Match: A0A6J1BUB6 (uncharacterized protein LOC111004829 OS=Momordica charantia OX=3673 GN=LOC111004829 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.0e-38
Identity = 82/89 (92.13%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MA  NRWLKP VYPLFA+VGVAVGIC MQLVRNITTNPEVRVIKE+RAAGVLDNFEEGEK
Sbjct: 1  MAATNRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRAAGVLDNFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKFLRTR PQIMPSINKFFSDPN
Sbjct: 61 YAEHGLRKFLRTRSPQIMPSINKFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. ExPASy TrEMBL
Match: A0A6A2Z9I1 (Mitotic spindle checkpoint protein MAD2-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110988pilonHSYRG00463 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-36
Identity = 76/89 (85.39%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MATANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEK 60
          MA+ANRWL+P VYPLFASV VAVGIC MQLVRNITTNPEVRV KE+RAAG+L+NFEEGEK
Sbjct: 1  MASANRWLRPEVYPLFASVSVAVGICAMQLVRNITTNPEVRVTKEKRAAGILENFEEGEK 60

Query: 61 YAEHGLRKFLRTRPPQIMPSINKFFSDPN 89
          YAEHGLRKF+R RPPQIMPS+N FFSDPN
Sbjct: 61 YAEHGLRKFIRKRPPQIMPSVNNFFSDPN 89

[Close]

BLAST of MELO3C010725 vs. TAIR 10
Match: AT3G48140.1 (B12D protein )

HSP 1 Score: 124.4 bits (311), Expect = 4.5e-29
Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 4  ANRWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEKYAE 63
          A+RWL+P VYPLFA+ GVAVGIC   L+RNIT NPEVR  KE RAAG+LDN  EGEKY E
Sbjct: 2  ASRWLRPEVYPLFAATGVAVGICAFSLIRNITGNPEVRCTKENRAAGILDNHAEGEKYKE 61

Query: 64 HGLRKFLRTRPPQIMPSINKFFSDP 88
          + LRKF+R + P+IMP +NKFF+DP
Sbjct: 62 NFLRKFVRNKKPEIMPGLNKFFTDP 86

[Close]

BLAST of MELO3C010725 vs. TAIR 10
Match: AT3G29970.1 (B12D protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-21
Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 6  RWLKP-VYPLFASVGVAVGICVMQLVRNITTNPEVRVIKERRAAGVLDNFEEGEKYAEHG 65
          RW++P VYPL  ++G    + V QL RN   NP+ R+ KE R  G+L+N +EGEKYA+H 
Sbjct: 3  RWVRPEVYPLLGAMGFVTSMVVFQLTRNAFLNPDCRINKEHRKMGILENKDEGEKYAQHN 62

Query: 66 LRKFLRTRPPQIMPSINKFFS 86
           RK+LRTR PQ+MPS+N+FFS
Sbjct: 63 FRKYLRTRQPQVMPSLNRFFS 83

The following BLAST results are available for this feature:

BLAST of MELO3C010725 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900034.1	4.8e-41	98.88	PREDICTED: uncharacterized protein LOC107990723 [Cucumis melo]	[more]
XP_004142944.1	1.4e-40	97.75	uncharacterized protein LOC101222643 [Cucumis sativus] >KGN62359.1 hypothetical ...	[more]
XP_022961943.1	2.7e-39	95.51	uncharacterized protein LOC111462563 [Cucurbita moschata]	[more]
XP_023545968.1	5.9e-39	94.38	uncharacterized protein LOC111805233 [Cucurbita pepo subsp. pepo]	[more]
KAG6598267.1	1.0e-38	94.38	hypothetical protein SDJN03_08045, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C010725 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C010725 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DVM4	2.3e-41	98.88	uncharacterized protein LOC107990723 OS=Cucumis melo OX=3656 GN=LOC107990723 PE=...	[more]
A0A0A0LMX7	6.8e-41	97.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350420 PE=4 SV=1	[more]
A0A6J1HDB5	1.3e-39	95.51	uncharacterized protein LOC111462563 OS=Cucurbita moschata OX=3662 GN=LOC1114625...	[more]
A0A6J1BUB6	7.0e-38	92.13	uncharacterized protein LOC111004829 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6A2Z9I1	3.0e-36	85.39	Mitotic spindle checkpoint protein MAD2-like OS=Hibiscus syriacus OX=106335 GN=F...	[more]

BLAST of MELO3C010725 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48140.1	4.5e-29	68.24	B12D protein	[more]
AT3G29970.1	1.6e-21	54.32	B12D protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010530	NADH-ubiquinone reductase complex 1 MLRQ subunit	PFAM	PF06522	B12D	coord: 11..75 e-value: 1.7E-22 score: 79.0
None	No IPR available	PANTHER	PTHR33417:SF13	OS07G0274700 PROTEIN	coord: 1..87
None	No IPR available	PANTHER	PTHR33417	G-BOX BINDING PROTEIN	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010725.1	MELO3C010725.1	mRNA