MELO3C010687.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C010687.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr03: 29815922 .. 29816230 (-)
RNA-Seq ExpressionMELO3C010687.jh1
SyntenyMELO3C010687.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

mRNA sequence

ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

Coding sequence (CDS)

ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

Protein sequence

MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST
Homology
[Close]
BLAST of MELO3C010687.jh1 vs. NCBI nr
Match: KAA0061064.1 (hypothetical protein E6C27_scaffold501G002020 [Cucumis melo var. makuwa])

HSP 1 Score: 208 bits (529), Expect = 1.07e-67
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 60
           MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL
Sbjct: 2   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 61

Query: 61  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 102
           PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST
Sbjct: 62  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103

[Close]
BLAST of MELO3C010687.jh1 vs. NCBI nr
Match: KGN62317.1 (hypothetical protein Csa_018773 [Cucumis sativus])

HSP 1 Score: 152 bits (385), Expect = 1.39e-45
Identity = 83/104 (79.81%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 1   MVISEDERC--LFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPK 60
           MVISEDERC  L +K+KPKVAD  EM   EQPTTPTSEEFRIGR VHNYL CPPPPRKPK
Sbjct: 1   MVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIGR-VHNYLACPPPPRKPK 60

Query: 61  SLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 102
           SLPGPITMS TT+ +NNNN AKYFT+YSEL A FFASTS FPST
Sbjct: 61  SLPGPITMSFTTVHNNNNNGAKYFTSYSELQAFFFASTSPFPST 100

[Close]
BLAST of MELO3C010687.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V162 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002020 PE=4 SV=1)

HSP 1 Score: 208 bits (529), Expect = 5.20e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 60
           MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL
Sbjct: 2   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 61

Query: 61  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 102
           PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST
Sbjct: 62  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103

[Close]
BLAST of MELO3C010687.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LNC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349030 PE=4 SV=1)

HSP 1 Score: 152 bits (385), Expect = 6.71e-46
Identity = 83/104 (79.81%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 1   MVISEDERC--LFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPK 60
           MVISEDERC  L +K+KPKVAD  EM   EQPTTPTSEEFRIGR VHNYL CPPPPRKPK
Sbjct: 1   MVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIGR-VHNYLACPPPPRKPK 60

Query: 61  SLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 102
           SLPGPITMS TT+ +NNNN AKYFT+YSEL A FFASTS FPST
Sbjct: 61  SLPGPITMSFTTVHNNNNNGAKYFTSYSELQAFFFASTSPFPST 100

The following BLAST results are available for this feature:
BLAST of MELO3C010687.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061064.11.07e-67100.00hypothetical protein E6C27_scaffold501G002020 [Cucumis melo var. makuwa][more]
KGN62317.11.39e-4579.81hypothetical protein Csa_018773 [Cucumis sativus][more]
BLAST of MELO3C010687.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C010687.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1625.20e-68100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LNC76.71e-4679.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349030 PE=4 SV=1[more]
BLAST of MELO3C010687.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010687.jh1.t1MELO3C010687.jh1.t1mRNA