MELO3C010687 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010687
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr03: 29068571 .. 29068879 (-)
RNA-Seq Expression	MELO3C010687
Synteny	MELO3C010687

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

mRNA sequence

ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

Coding sequence (CDS)

ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

Protein sequence

MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST

Homology

[Close]

BLAST of MELO3C010687 vs. NCBI nr
Match: KAA0061064.1 (hypothetical protein E6C27_scaffold501G002020 [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 3.9e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 60
           MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL
Sbjct: 2   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 61

Query: 61  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103
           PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST
Sbjct: 62  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103

[Close]

BLAST of MELO3C010687 vs. NCBI nr
Match: KGN62317.1 (hypothetical protein Csa_018773 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.9e-33
Identity = 83/104 (79.81%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 1   MVISEDE--RCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPK 60
           MVISEDE  RCL +K+KPKVAD  EM   EQPTTPTSEEFRIG RVHNYL CPPPPRKPK
Sbjct: 1   MVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIG-RVHNYLACPPPPRKPK 60

Query: 61  SLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103
           SLPGPITMS TT+ +NNNN AKYFT+YSEL A FFASTS FPST
Sbjct: 61  SLPGPITMSFTTVHNNNNNGAKYFTSYSELQAFFFASTSPFPST 100

[Close]

BLAST of MELO3C010687 vs. ExPASy TrEMBL
Match: A0A5A7V162 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002020 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 60
           MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL
Sbjct: 2   MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSL 61

Query: 61  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103
           PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST
Sbjct: 62  PGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103

[Close]

BLAST of MELO3C010687 vs. ExPASy TrEMBL
Match: A0A0A0LNC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349030 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.3e-34
Identity = 83/104 (79.81%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 1   MVISEDE--RCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPK 60
           MVISEDE  RCL +K+KPKVAD  EM   EQPTTPTSEEFRIG RVHNYL CPPPPRKPK
Sbjct: 1   MVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIG-RVHNYLACPPPPRKPK 60

Query: 61  SLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103
           SLPGPITMS TT+ +NNNN AKYFT+YSEL A FFASTS FPST
Sbjct: 61  SLPGPITMSFTTVHNNNNNGAKYFTSYSELQAFFFASTSPFPST 100

The following BLAST results are available for this feature:

BLAST of MELO3C010687 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061064.1	3.9e-50	100.00	hypothetical protein E6C27_scaffold501G002020 [Cucumis melo var. makuwa]	[more]
KGN62317.1	1.9e-33	79.81	hypothetical protein Csa_018773 [Cucumis sativus]	[more]

BLAST of MELO3C010687 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C010687 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V162	1.9e-50	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LNC7	9.3e-34	79.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349030 PE=4 SV=1	[more]

BLAST of MELO3C010687 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010687.1	MELO3C010687.1	mRNA