MELO3C010584 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010584
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ribosome maturation protein SBDS
Location	chr03: 9225937 .. 9228989 (-)
RNA-Seq Expression	MELO3C010584
Synteny	MELO3C010584

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTGTGTTATTATCGTTTCCCTTTTTAATCCAATCCCCAAACTTTAACGAAGATGTCCCGATCGCTGGTGCAGCCTATCGGGCAGAAGCGGCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGCTCTGGCGTGTAAGCTCCCTTAAACTCTATCGTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCAATTATCGGATTTTTTTTTAATTGTTTGATGGGTTTTTATGATTAAGAAGATGGTATAGCTTTGATGTTATAATAGGATAGAAATTGCGACCAGTTTATGATTTATTTGTTAAATGGAGGATCCCCTTGGCTAACGGATTAGGAAAAGGAAAAACATCCTCTAATCACTAGTGACAACATTAGTTGGAGTGGTAAATTGTTGAAGTTAGATGGATATGAGTATAATCCATCAGATCAGTTCTAGATTTTAGGGCTCGATTTGCATTGTGTACTATTTGACCTACTTTGGTACTGGTTTACTTTATATTTTATTATTTGTGTTGTATAATTAAACGTGACCAATATGAACTTGAAAATCTATATTGTAACAGGGAGAAAGACTTGGATGAGGTTTTGCAGTCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGGTTGGTGGAATTCCTGGATGAAGTTTTTTTAAATGTTTTTAATTGCATCTAGATATTTATGGATGATTCTTTTTCTTTTGGTGTGTGCATTTGTGTTCATTTTTTTAACTGATGAAATTGTCAACTTCCTGGTACTAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATTGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTGTCGATCCAAATCACAGCTCAAAGAAACAGGTGGGTGGATACTTTTTGCTGAATGTGCGATGAAAATTCTTCTGCTTTAGATTCTTATAACTATTAATTCAAGGCCACAATTTTCAGCTGATGTTTTTTGTGATATGCAGGCACTAGAGGTTATTCATGAGCTTCAGAAACAATTCCCAATTAAACGGTCACCTATGAGGTTACGATATATTGTACCTGAACAGAACGTCCCTTCTCTTCTTGATAAGTTAAATGCTTGGAGTGCTAGTATTGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATAGTGAGTCCGAGTTTCTTCATTGCAATTGTTGCTTTGCTTATCTTCTTCAATTTGTTAATGATATCATCATTTCACTCTTCTCCTATAACAACTTGAATTCTTATATTGGTTGTTACTTTCTGCATGGGTGTCAATATGGCATTAGTTGCCCATGTGTTGTGCTGGACTAGGCCGTGTATGCCTGTATGATATTGCATGATAAATCCTGGGAACGAAGACTTTAGGAAGCGAACCATCTCAACCTAATCACAAACACAGATGATTCACTTCTTTTTTCTATGTGAGAAAAATTTCAAGCGAGGTCTAGGCATTTAGTCATGCTTAAAAGCAGCTAATGTTAAGACACATTGAAATGTGAGTATTAGTTGCTTATATTATTGTGTCACCGTTTCTTTTTGCTGGTGGAGTGGGATTGAGATGAGGAAATTGTCTGAAACACTGTACTCAGGACGTGGAAGTATTCGTACCGATAAATATATATTTGATAATTAATTGTCATCCTCATGGCAATCAAAGAGATGTATGAGAACGGAGATAGATAGTGGTAGAAGCCTTTGTATTTATTGTACTTATCATCTTTTTGAAATGGTAACCCATTTCTATAAGTAGTGATCTTGATGAATTACTTGTAGTACTTGTGACTCACTAGCCGTCCTGAACTATCACTGTTCACTTATTATTAGCTAATGCTAGTTTCTTCATTAGTAATCGTTCAAGACATCAACCATTGAAATCATATTTGTGTTGTCAAGTTTCATGGTTTCTCTGGAGTCATCTCCTTGGTATCATTAAAGCTTCTGCTCACAAGGAGGCTGTTTCTCTGTTTCTCTTTGTTGGTTCAAATGCTCAGTGATCGAGTTTAGACTGTTAAGTTAGTTATTGATTATTAACTTCATATGTGCATTTCCCACTAAGTACTGACAATGCTTTGTAGTAGGTTGCACTTCAATGATACTGGGAACTGAGTTTTTATCTTTTTTGGTTGTTCAACAGATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGCAATCCACTAATGAGTGAACTACATGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGAGACACCAATGTGGATCAATACGAGGACGATTATGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAAACAGAATCGTCTATTCCTCAGCTAAGTGAAGCTTTACAAAAGCAGACAATTTCTGTCAACAGTGATAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGAGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGATTGGCATAAGCATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACTGAAGAAGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGAACTACCTGCCGTGTTTATGCTTCGTTGAATAGCTTTGAGGTTTTTGTACTTTAGTTTTGCTGCTAAATAGTATGAAACAATACTATTGTAGCTTACACTTGTTAGACGGTCTCAACATGTCTCGCATCATGTAACAATCTCAATTTTCATAGTTTTGTCATTTTAGTGCTTTTTGTACTAGAAAGAATGTAATGACTGAAATATGACCGCTTTGTAAATCAATTCGGGTTTGATTTAAATGTTTTATGTTTTC

mRNA sequence

GTTTTGTGTTATTATCGTTTCCCTTTTTAATCCAATCCCCAAACTTTAACGAAGATGTCCCGATCGCTGGTGCAGCCTATCGGGCAGAAGCGGCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGCTCTGGCGTGGAGAAAGACTTGGATGAGGTTTTGCAGTCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATTGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTGTCGATCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAGCTTCAGAAACAATTCCCAATTAAACGGTCACCTATGAGGTTACGATATATTGTACCTGAACAGAACGTCCCTTCTCTTCTTGATAAGTTAAATGCTTGGAGTGCTAGTATTGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATAATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGCAATCCACTAATGAGTGAACTACATGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGAGACACCAATGTGGATCAATACGAGGACGATTATGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAAACAGAATCGTCTATTCCTCAGCTAAGTGAAGCTTTACAAAAGCAGACAATTTCTGTCAACAGTGATAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGAGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGATTGGCATAAGCATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACTGAAGAAGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGAACTACCTGCCGTGTTTATGCTTCGTTGAATAGCTTTGAGGTTTTTGTACTTTAGTTTTGCTGCTAAATAGTATGAAACAATACTATTGTAGCTTACACTTGTTAGACGGTCTCAACATGTCTCGCATCATGTAACAATCTCAATTTTCATAGTTTTGTCATTTTAGTGCTTTTTGTACTAGAAAGAATGTAATGACTGAAATATGACCGCTTTGTAAATCAATTCGGGTTTGATTTAAATGTTTTATGTTTTC

Coding sequence (CDS)

ATGTCCCGATCGCTGGTGCAGCCTATCGGGCAGAAGCGGCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGCTCTGGCGTGGAGAAAGACTTGGATGAGGTTTTGCAGTCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATTGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTGTCGATCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAGCTTCAGAAACAATTCCCAATTAAACGGTCACCTATGAGGTTACGATATATTGTACCTGAACAGAACGTCCCTTCTCTTCTTGATAAGTTAAATGCTTGGAGTGCTAGTATTGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATAATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGCAATCCACTAATGAGTGAACTACATGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGAGACACCAATGTGGATCAATACGAGGACGATTATGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAAACAGAATCGTCTATTCCTCAGCTAAGTGAAGCTTTACAAAAGCAGACAATTTCTGTCAACAGTGATAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGAGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGATTGGCATAAGCATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACTGAAGAAGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGA

Protein sequence

MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

Homology

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BLAST of MELO3C010584 vs. NCBI nr
Match: XP_008466694.1 (PREDICTED: ribosome maturation protein SBDS [Cucumis melo] >KAA0059838.1 ribosome maturation protein SBDS [Cucumis melo var. makuwa] >TYK24793.1 ribosome maturation protein SBDS [Cucumis melo var. makuwa])

HSP 1 Score: 713.8 bits (1841), Expect = 7.6e-202
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300
           CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

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BLAST of MELO3C010584 vs. NCBI nr
Match: XP_004146781.1 (ribosome maturation protein SBDS [Cucumis sativus] >KGN47741.1 hypothetical protein Csa_004177 [Cucumis sativus])

HSP 1 Score: 693.7 bits (1789), Expect = 8.2e-196
Identity = 347/359 (96.66%), Postives = 355/359 (98.89%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVERDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKELKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQK FPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKHFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAWSASIVS+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSDDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300
           CLHEEGDTNVDQYEDDYENVEL PRQLKET+S IPQLSEALQKQTIS+NSDNAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELPPRQLKETKSVIPQLSEALQKQTISINSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGD TKFREH+KS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDVTKFREHYKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

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BLAST of MELO3C010584 vs. NCBI nr
Match: XP_038886377.1 (ribosome maturation protein SBDS [Benincasa hispida])

HSP 1 Score: 684.9 bits (1766), Expect = 3.8e-193
Identity = 341/359 (94.99%), Postives = 353/359 (98.33%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQTEICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYIV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLNAWSASI+SNDQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSF
Sbjct: 181 PEQNFPSLLDKLNAWSASIISNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300
           CLHEEGDTNVDQY+DDYENVEL PRQ+KE+ES+IPQL+EALQKQTISVNS+NA KEGKRC
Sbjct: 241 CLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLNEALQKQTISVNSENAMKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNV VGDAT+FREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGD+ESDLKEYSF
Sbjct: 301 STCNVVVGDATQFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDTESDLKEYSF 359

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BLAST of MELO3C010584 vs. NCBI nr
Match: XP_022936066.1 (ribosome maturation protein SBDS [Cucurbita moschata] >KAG7025021.1 Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657.9 bits (1696), Expect = 5.0e-185
Identity = 328/360 (91.11%), Postives = 344/360 (95.56%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLN+WSASI+SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR 300
           CLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKS+WHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of MELO3C010584 vs. NCBI nr
Match: XP_023535044.1 (ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 657.1 bits (1694), Expect = 8.5e-185
Identity = 329/360 (91.39%), Postives = 343/360 (95.28%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLNAWSASI+SND SGNQQRSIICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNAWSASIISNDPSGNQQRSIICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR 300
           CLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKS+WHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

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BLAST of MELO3C010584 vs. ExPASy Swiss-Prot
Match: P70122 (Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4)

HSP 1 Score: 258.5 bits (659), Expect = 1.2e-67
Identity = 138/247 (55.87%), Postives = 177/247 (71.66%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      + S D S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS 
Sbjct: 182 EGKKLKEKLKPLMKVVESEDYS--QQLEIVCLIDPGCFREIDELIKKETKGRGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MELO3C010584 vs. ExPASy Swiss-Prot
Match: Q5RK30 (Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.6e-67
Identity = 137/247 (55.47%), Postives = 177/247 (71.66%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MRLR+++P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVN 181

Query: 184 NVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      + S D S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS 
Sbjct: 182 EGKKLKEKLKPLMKVVESEDYS--QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MELO3C010584 vs. ExPASy Swiss-Prot
Match: Q3SWZ6 (Ribosome maturation protein SBDS OS=Bos taurus OX=9913 GN=SBDS PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.4e-67
Identity = 138/247 (55.87%), Postives = 176/247 (71.26%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      I S D    QQ  I+C +DP  +R+ + L+   ++  G  EVLS 
Sbjct: 182 EGKKLKEKLKPLIKVIESEDY--GQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MELO3C010584 vs. ExPASy Swiss-Prot
Match: Q9Y3A5 (Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4)

HSP 1 Score: 252.3 bits (643), Expect = 8.3e-66
Identity = 136/247 (55.06%), Postives = 175/247 (70.85%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH++V  N S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      I S D    QQ  I+C +DP  +R+ + L+   ++  G  EVL+ 
Sbjct: 182 EGKKLKEKLKPLIKVIESEDY--GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MELO3C010584 vs. ExPASy Swiss-Prot
Match: Q5RAZ2 (Ribosome maturation protein SBDS OS=Pongo abelii OX=9601 GN=SBDS PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.3e-66
Identity = 136/247 (55.06%), Postives = 175/247 (70.85%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH++V  N S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      I S D    QQ  I+C +DP  +R+ + L+   ++  G  EVL+ 
Sbjct: 182 EGKKLKEKLKPLIKVIESEDY--GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MELO3C010584 vs. ExPASy TrEMBL
Match: A0A5A7UXA4 (Ribosome maturation protein SBDS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00400 PE=3 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 3.7e-202
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300
           CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of MELO3C010584 vs. ExPASy TrEMBL
Match: A0A1S3CRW0 (ribosome maturation protein SBDS OS=Cucumis melo OX=3656 GN=LOC103504043 PE=3 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 3.7e-202
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300
           CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of MELO3C010584 vs. ExPASy TrEMBL
Match: A0A0A0KIY6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G397690 PE=3 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 4.0e-196
Identity = 347/359 (96.66%), Postives = 355/359 (98.89%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVERDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKELKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQK FPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKHFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAWSASIVS+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSDDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300
           CLHEEGDTNVDQYEDDYENVEL PRQLKET+S IPQLSEALQKQTIS+NSDNAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELPPRQLKETKSVIPQLSEALQKQTISINSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGD TKFREH+KS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDVTKFREHYKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of MELO3C010584 vs. ExPASy TrEMBL
Match: A0A6J1F6G6 (ribosome maturation protein SBDS OS=Cucurbita moschata OX=3662 GN=LOC111442780 PE=3 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.4e-185
Identity = 328/360 (91.11%), Postives = 344/360 (95.56%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLN+WSASI+SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR 300
           CLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKS+WHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of MELO3C010584 vs. ExPASy TrEMBL
Match: A0A6J1IK36 (ribosome maturation protein SBDS OS=Cucurbita maxima OX=3661 GN=LOC111474460 PE=3 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.0e-185
Identity = 326/360 (90.56%), Postives = 344/360 (95.56%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLN+WSASI+SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR 300
           CLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTQKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKS+WHKHN+KRKTKNLPPLTEEEC VE+A+GDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNIKRKTKNLPPLTEEECMVEIAIGDSESDLKEYSF 360

[Close]

BLAST of MELO3C010584 vs. TAIR 10
Match: AT1G43860.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 459.1 bits (1180), Expect = 3.2e-129
Identity = 232/371 (62.53%), Postives = 289/371 (77.90%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MS++LVQP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYS
Sbjct: 1   MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAK+KDL  +FG+DD T+IC+ IL++GELQVAGKERE+Q S+QFRDIATIVMQK
Sbjct: 61  NVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           T NPET+RPYTISM+ERLM EIHFAVDP+ +SKKQAL+VI ELQK FPIKRSPMRLR  V
Sbjct: 121 TINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 180

Query: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           P QN PSLL+KL  W  S+VS D+SG Q  S +CE++P  +R+C+  +  + GR E+L+ 
Sbjct: 181 PVQNFPSLLEKLKEWDGSVVSKDESGTQM-STVCEMEPGLFRECDSHVRSIQGRLEILAV 240

Query: 241 CLHEEGDTNVDQYEDDYE-----NVELLP--RQLKETESSIPQLSEALQKQTISVNSD-- 300
            +H EGDT++D Y++  +     +  LLP   + K+    + +LS+ LQKQ IS   +  
Sbjct: 241 SVHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIK 300

Query: 301 ---NAPKEGKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMG 360
                 K+G +CSTCN  VG+A ++REH KSDWHKHN+KRKT+ LPP++ +EC  E+ M 
Sbjct: 301 QEGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPISADECMSEIDMD 360

[Close]

BLAST of MELO3C010584 vs. TAIR 10
Match: AT4G31420.1 (Zinc finger protein 622 )

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 297 GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE 339
           G  C+ CN+   D  +   H+KSDWH++N+KRK   +P +TE
Sbjct: 3   GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTE 44

[Close]

BLAST of MELO3C010584 vs. TAIR 10
Match: AT4G31420.2 (Zinc finger protein 622 )

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 297 GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE 339
           G  C+ CN+   D  +   H+KSDWH++N+KRK   +P +TE
Sbjct: 3   GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTE 44

[Close]

BLAST of MELO3C010584 vs. TAIR 10
Match: AT2G24500.1 (Zinc finger protein 622 )

HSP 1 Score: 42.7 bits (99), Expect = 7.1e-04
Identity = 17/42 (40.48%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 297 GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE 339
           G  C++CN    D  + + H+KS+WH++N+KRK   +P +TE
Sbjct: 3   GLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTE 44

The following BLAST results are available for this feature:

BLAST of MELO3C010584 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466694.1	7.6e-202	100.00	PREDICTED: ribosome maturation protein SBDS [Cucumis melo] >KAA0059838.1 ribosom...	[more]
XP_004146781.1	8.2e-196	96.66	ribosome maturation protein SBDS [Cucumis sativus] >KGN47741.1 hypothetical prot...	[more]
XP_038886377.1	3.8e-193	94.99	ribosome maturation protein SBDS [Benincasa hispida]	[more]
XP_022936066.1	5.0e-185	91.11	ribosome maturation protein SBDS [Cucurbita moschata] >KAG7025021.1 Ribosome mat...	[more]
XP_023535044.1	8.5e-185	91.39	ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C010584 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P70122	1.2e-67	55.87	Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4	[more]
Q5RK30	2.6e-67	55.47	Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1	[more]
Q3SWZ6	4.4e-67	55.87	Ribosome maturation protein SBDS OS=Bos taurus OX=9913 GN=SBDS PE=2 SV=1	[more]
Q9Y3A5	8.3e-66	55.06	Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4	[more]
Q5RAZ2	8.3e-66	55.06	Ribosome maturation protein SBDS OS=Pongo abelii OX=9601 GN=SBDS PE=2 SV=1	[more]

BLAST of MELO3C010584 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXA4	3.7e-202	100.00	Ribosome maturation protein SBDS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CRW0	3.7e-202	100.00	ribosome maturation protein SBDS OS=Cucumis melo OX=3656 GN=LOC103504043 PE=3 SV...	[more]
A0A0A0KIY6	4.0e-196	96.66	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G397690 P...	[more]
A0A6J1F6G6	2.4e-185	91.11	ribosome maturation protein SBDS OS=Cucurbita moschata OX=3662 GN=LOC111442780 P...	[more]
A0A6J1IK36	7.0e-185	90.56	ribosome maturation protein SBDS OS=Cucurbita maxima OX=3661 GN=LOC111474460 PE=...	[more]

BLAST of MELO3C010584 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43860.1	3.2e-129	62.53	sequence-specific DNA binding transcription factors	[more]
AT4G31420.1	1.4e-04	42.86	Zinc finger protein 622	[more]
AT4G31420.2	1.4e-04	42.86	Zinc finger protein 622	[more]
AT2G24500.1	7.1e-04	40.48	Zinc finger protein 622	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.240		coord: 174..251 e-value: 1.5E-11 score: 46.1
None	No IPR available	PANTHER	PTHR10927:SF3	BNAANNG06530D PROTEIN	coord: 1..359
IPR018978	Ribosome maturation protein Sdo1/SBDS, C-terminal	PFAM	PF09377	SBDS_C	coord: 110..225 e-value: 1.5E-27 score: 95.9
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily	GENE3D	3.30.1250.10		coord: 1..96 e-value: 1.3E-39 score: 136.2
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily	SUPERFAMILY	89895	FYSH domain	coord: 13..96
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily	GENE3D	1.10.10.900		coord: 100..172 e-value: 7.0E-30 score: 104.8
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily	SUPERFAMILY	109728	Hypothetical protein AF0491, middle domain	coord: 98..171
IPR019783	Ribosome maturation protein Sdo1/SBDS, N-terminal	PFAM	PF01172	SBDS	coord: 16..102 e-value: 2.5E-29 score: 101.1
IPR002140	Ribosome maturation protein Sdo1/SBDS	TIGRFAM	TIGR00291	TIGR00291	coord: 13..231 e-value: 1.5E-50 score: 169.8
IPR039100	Ribosome maturation protein Sdo1/SBDS-like	PANTHER	PTHR10927	RIBOSOME MATURATION PROTEIN SBDS	coord: 1..359
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 300..322
IPR018023	Ribosome maturation protein SBDS, conserved site	PROSITE	PS01267	UPF0023	coord: 46..65
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 286..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010584.1	MELO3C010584.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042256	mature ribosome assembly
biological_process	GO:0042254	ribosome biogenesis