MELO3C010527 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACTTTCTAAGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGGCATCGAGCCTTGTACACTTGTGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCATTTCTATGCCCTTTTTGGTTTTCATGTGTTTCTTTTGTTTGTACTTTCGTTTATTTTTGCCTTTTTTATTATTTATTATTTTTTATATTTTCACAAATGTGTTTGTCAATGTTTTGAATTCAGTATATCATTGCATGCTTCTTTTTCCAAATACACATGTGTATGTATGTCTGTATGTGTGTGTATGTAAGGATGTGTGTGTGTATGTTTATGTATGTATTTATGCAAACATACTTATTTTTTTTATCATATCAAGCTAAGATGTATACTTTGGTTGTTTCTTAATTTGCTTTTGTCACATTCTTTTTAAGGACGACACTGCATTTGAGAAGCAAAGTGCCCTCTTTGCGCTTGGTGTGTAA ATGTCACTTTCTAAGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGGCATCGAGCCTTGTACACTTGTGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGACGACACTGCATTTGAGAAGCAAAGTGCCCTCTTTGCGCTTGGTGTGTAA ATGTCACTTTCTAAGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGGCATCGAGCCTTGTACACTTGTGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGACGACACTGCATTTGAGAAGCAAAGTGCCCTCTTTGCGCTTGGTGTGTAA MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALGV Homology
BLAST of MELO3C010527 vs. NCBI nr
Match: KAG5537879.1 (hypothetical protein RHGRI_025094 [Rhododendron griersonianum]) HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MELO3C010527 vs. NCBI nr
Match: KAG5537881.1 (hypothetical protein RHGRI_025094 [Rhododendron griersonianum]) HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MELO3C010527 vs. NCBI nr
Match: KAG5537883.1 (hypothetical protein RHGRI_025094 [Rhododendron griersonianum]) HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MELO3C010527 vs. NCBI nr
Match: KAG5537880.1 (hypothetical protein RHGRI_025094 [Rhododendron griersonianum]) HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MELO3C010527 vs. NCBI nr
Match: KAG2294770.1 (hypothetical protein Bca52824_041439 [Brassica carinata]) HSP 1 Score: 106.7 bits (265), Expect = 6.6e-20 Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy Swiss-Prot
Match: Q9SSN0 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g72960 PE=2 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 1.9e-22 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy Swiss-Prot
Match: P93042 (Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 5.6e-22 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy Swiss-Prot
Match: Q2QMH2 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0604600 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 6.2e-21 Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy Swiss-Prot
Match: Q0JLS6 (Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-19 Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy Swiss-Prot
Match: Q9FKE9 (Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 3.4e-19 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy TrEMBL
Match: A0A6J1KMA1 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494586 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy TrEMBL
Match: A0A6J1KDB3 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494586 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy TrEMBL
Match: A0A218WX77 (GB1/RHD3-type G domain-containing protein OS=Punica granatum OX=22663 GN=CDL15_Pgr013210 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20 Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy TrEMBL
Match: A0A6J1HJ25 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111464506 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of MELO3C010527 vs. ExPASy TrEMBL
Match: A0A6J1HND9 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111464506 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of MELO3C010527 vs. TAIR 10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 105.5 bits (262), Expect = 1.4e-23 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MELO3C010527 vs. TAIR 10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 104.0 bits (258), Expect = 4.0e-23 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MELO3C010527 vs. TAIR 10
Match: AT3G13870.2 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 102.8 bits (255), Expect = 8.8e-23 Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0
BLAST of MELO3C010527 vs. TAIR 10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 94.7 bits (234), Expect = 2.4e-20 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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