MELO3C010485 (gene) Melon (DHL92) v4

Overview
NameMELO3C010485
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionAsp_protease domain-containing protein
Locationchr10: 15974858 .. 15975078 (-)
RNA-Seq ExpressionMELO3C010485
SyntenyMELO3C010485
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGACGCTGGCGCAACCCATAATGTAATGGATCCTGAAGAGGCAAAGCGGCTAGGCCTCAGGACCACCAGGAGAAGCGACACTGAGATAAAGATCATCAGTGCCAAATCCATGAAGAACATTGGATGGGCTCAGGATGTCAAGACAAGGGTAGGAGGATGGCAAGGTAAGCTCAATTTTCTCATAGCCCATCTTGACGATTGTAAGATAATCCTAGG

mRNA sequence

ATGTTAGACGCTGGCGCAACCCATAATGTAATGGATCCTGAAGAGGCAAAGCGGCTAGGCCTCAGGACCACCAGGAGAAGCGACACTGAGATAAAGATCATCAGTGCCAAATCCATGAAGAACATTGGATGGGCTCAGGATGTCAAGACAAGGGTAGGAGGATGGCAAGGTAAGCTCAATTTTCTCATAGCCCATCTTGACGATTGTAAGATAATCCTAGG

Coding sequence (CDS)

ATGTTAGACGCTGGCGCAACCCATAATGTAATGGATCCTGAAGAGGCAAAGCGGCTAGGCCTCAGGACCACCAGGAGAAGCGACACTGAGATAAAGATCATCAGTGCCAAATCCATGAAGAACATTGGATGGGCTCAGGATGTCAAGACAAGGGTAGGAGGATGGCAAGGTAAGCTCAATTTTCTCATAGCCCATCTTGACGATTGTAAGATAATCCTA

Protein sequence

MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIIL
Homology
BLAST of MELO3C010485 vs. NCBI nr
Match: KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1   MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
           MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN
Sbjct: 374 MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 433

Query: 61  FLIAHLDDCKIIL 74
           FLIAHLDDCKIIL
Sbjct: 434 FLIAHLDDCKIIL 446

BLAST of MELO3C010485 vs. NCBI nr
Match: TYK30022.1 (Asp_protease domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 9.3e-22
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0

Query: 1  MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
          MLD GAT NVMDP+EAKRLGLR TRRSDTEIKII+ K M NI WA DVK R+GG QG+L+
Sbjct: 13 MLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVKIRIGGCQGELD 72

Query: 61 FLIAHLDDCKIIL 74
          FLIA L+DCKIIL
Sbjct: 73 FLIAPLNDCKIIL 85

BLAST of MELO3C010485 vs. NCBI nr
Match: KAA0057354.1 (uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK30043.1 uncharacterized protein E5676_scaffold216G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 6.0e-21
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0

Query: 1  MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
          MLD  AT+NVMD +EAKRLGLRTTRRSD EIKII AK M+N+GW  DVKTRV GWQGKL+
Sbjct: 1  MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 61 FLIAHLDDCKIIL 74
          FLI  LDD KI++
Sbjct: 61 FLITLLDDYKIVV 73

BLAST of MELO3C010485 vs. NCBI nr
Match: KAA0057356.1 (Asp_protease domain-containing protein [Cucumis melo var. makuwa] >TYK30045.1 Asp_protease domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 2.5e-19
Identity = 49/64 (76.56%), Postives = 58/64 (90.62%), Query Frame = 0

Query: 1  MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
          MLD GAT+NV+DPEE K LGL+TTRRSDT+IKII+ K M+NIGWA DVKT+VGGWQG+L+
Sbjct: 27 MLDTGATNNVIDPEEDKWLGLKTTRRSDTKIKIINVKPMRNIGWAWDVKTKVGGWQGELD 86

Query: 61 FLIA 65
          FLIA
Sbjct: 87 FLIA 90

BLAST of MELO3C010485 vs. NCBI nr
Match: KAE8637433.1 (hypothetical protein CSA_004611, partial [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-18
Identity = 43/73 (58.90%), Postives = 60/73 (82.19%), Query Frame = 0

Query: 1   MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
           +LD GAT N++D EEAKRLGL+ TRR D E+KII+A+  +N GWA +VK ++G W+GK++
Sbjct: 275 LLDTGATSNIIDLEEAKRLGLKITRRDDVELKIINAEPTRNYGWAWNVKVKIGEWKGKID 334

Query: 61  FLIAHLDDCKIIL 74
           FL+A LDDCK++L
Sbjct: 335 FLLAPLDDCKVVL 347

BLAST of MELO3C010485 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.7e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1   MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
           MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN
Sbjct: 374 MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 433

Query: 61  FLIAHLDDCKIIL 74
           FLIAHLDDCKIIL
Sbjct: 434 FLIAHLDDCKIIL 446

BLAST of MELO3C010485 vs. ExPASy TrEMBL
Match: A0A5D3E2A4 (Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00310 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.5e-22
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0

Query: 1  MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
          MLD GAT NVMDP+EAKRLGLR TRRSDTEIKII+ K M NI WA DVK R+GG QG+L+
Sbjct: 13 MLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVKIRIGGCQGELD 72

Query: 61 FLIAHLDDCKIIL 74
          FLIA L+DCKIIL
Sbjct: 73 FLIAPLNDCKIIL 85

BLAST of MELO3C010485 vs. ExPASy TrEMBL
Match: A0A5A7UQ97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00090 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-21
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0

Query: 1  MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
          MLD  AT+NVMD +EAKRLGLRTTRRSD EIKII AK M+N+GW  DVKTRV GWQGKL+
Sbjct: 1  MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 61 FLIAHLDDCKIIL 74
          FLI  LDD KI++
Sbjct: 61 FLITLLDDYKIVV 73

BLAST of MELO3C010485 vs. ExPASy TrEMBL
Match: A0A5D3E435 (Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00110 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 49/64 (76.56%), Postives = 58/64 (90.62%), Query Frame = 0

Query: 1  MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 60
          MLD GAT+NV+DPEE K LGL+TTRRSDT+IKII+ K M+NIGWA DVKT+VGGWQG+L+
Sbjct: 27 MLDTGATNNVIDPEEDKWLGLKTTRRSDTKIKIINVKPMRNIGWAWDVKTKVGGWQGELD 86

Query: 61 FLIA 65
          FLIA
Sbjct: 87 FLIA 90

BLAST of MELO3C010485 vs. ExPASy TrEMBL
Match: A0A5D3E2B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00360 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.2e-16
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0

Query: 2   LDAGATHNVMDPEE--AKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKL 61
           L A    +  +P+E  AKRLGL+ TRRSDTEIKIISAK ++NIG A D+KTRVGGWQG+L
Sbjct: 225 LSAMENDSFKEPQEGVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGEL 284

Query: 62  NFLIAHLDDCKIIL 74
           +FLIA L+D KI++
Sbjct: 285 DFLIAPLNDYKIVI 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0035961.11.8e-33100.00uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK3... [more]
TYK30022.19.3e-2276.71Asp_protease domain-containing protein [Cucumis melo var. makuwa][more]
KAA0057354.16.0e-2173.97uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK... [more]
KAA0057356.12.5e-1976.56Asp_protease domain-containing protein [Cucumis melo var. makuwa] >TYK30045.1 As... [more]
KAE8637433.12.8e-1858.90hypothetical protein CSA_004611, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T2W88.7e-34100.00Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3E2A44.5e-2276.71Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7UQ972.9e-2173.97Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3E4351.2e-1976.56Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3E2B78.2e-1663.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13650Asp_protease_2coord: 1..64
e-value: 2.2E-5
score: 25.1
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 1..73
e-value: 3.75259E-11
score: 51.5684
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 1..73
e-value: 3.7E-10
score: 41.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010485.1MELO3C010485.1mRNA