MELO3C010414 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010414
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	transmembrane protein 208 homolog
Location	chr07: 9824690 .. 9825605 (+)
RNA-Seq Expression	MELO3C010414
Synteny	MELO3C010414

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGCCAACCTATGGTGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGGTTTGTCTTCTTTCTTCTTAATGTATAACCATTACATGTCAGTTTCATGTATGTTTTATCTCCATTACATAAAGAATAGTTGTTGAGTATAAACCTAGCATATTTAATTTTTCTGTGACCCAAGTTTAAGGTGAGCGATATATTGCTTTGAAACTTTCAATTTTCTTTCTTGAACATATTACAGGATAGTGATACATAAGCAAGCTTGCTGCTTTAAGAGGAACATGCTTATTGGGTTTTTAAGTTTTCTGGTAAATGCTTCTGCTCCACTTGTTGCTTTGATCAGTTGATATGTTTACCATCACCAATGTGACAGAACAATTCATGGTAATATTTTTGGCCTACATAATATTGAGTGGTTTTGTGTGGGGTTTTTCCATTCAGTGGAAAATGTGGTGTTTATAATATGAATGAAGTAATTGAAAGAAACATATGGCTTTTCAATGACTTTTTTTCTTCTTTTAATCGTTTTATGAATCTTGTTCTGTCGCCTGCTTTTTTTTTTTTTGGTGTAAAACTAAGCATCCCTTCTCTCATTTCAACCTTTCTTTTTTAGTTAGTAATTGGTGATCTGTTATGTAACAAGCATTTGTTGTTTGTGGTTCTTCCTTGTTCTTTTACCGAAAAAATTATGGATTGACTTTAAAAAGAGGTTGGAATCCAATATGGTTAGCCTTCCATCTGTCAACAATTTATTGACATTTCAATAATTAATCGAAACATCTTGATGGTTTGTCTTGTTTTTTTGCAGCTACATGCATAATGTGATCTACATTACAAGGTTTGTGCAAATAATGTCAATCCTTTCCGAGAAGTTTTGGTACACAACCTTGTGGTAA

mRNA sequence

ATGGCAAAGCCAACCTATGGTGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGCTACATGCATAATGTGATCTACATTACAAGGTTTGTGCAAATAATGTCAATCCTTTCCGAGAAGTTTTGGTACACAACCTTGTGGTAA

Coding sequence (CDS)

ATGGCAAAGCCAACCTATGGTGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGCTACATGCATAATGTGATCTACATTACAAGGTTTGTGCAAATAATGTCAATCCTTTCCGAGAAGTTTTGGTACACAACCTTGTGGTAA

Protein sequence

MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTLW

Homology

[Close]

BLAST of MELO3C010414 vs. NCBI nr
Match: XP_022946520.1 (transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmembrane protein 208 homolog [Cucurbita maxima] >KAG6599131.1 Transmembrane protein 208, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030072.1 Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 103.2 bits (256), Expect = 7.1e-19
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MA PTYGDDGELLDGGFDMSTGGICGYMH+VIYIT FVQIMSILS KFWYT L
Sbjct: 68  MADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. NCBI nr
Match: XP_006428665.2 (transmembrane protein 208 homolog [Citrus clementina] >XP_006480476.1 transmembrane protein 208 homolog [Citrus sinensis] >XP_006480477.1 transmembrane protein 208 homolog [Citrus sinensis] >XP_006480478.1 transmembrane protein 208 homolog [Citrus sinensis] >KDO53106.1 hypothetical protein CISIN_1g0306652mg [Citrus sinensis] >KDO53107.1 hypothetical protein CISIN_1g0306652mg [Citrus sinensis] >KDO53108.1 hypothetical protein CISIN_1g0306652mg [Citrus sinensis] >KDO53109.1 hypothetical protein CISIN_1g0306652mg [Citrus sinensis])

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKPTY DDGEL+DGGFDMSTGGICGY+H+VIYIT FVQ+MSILSEKFWYT L
Sbjct: 68  MAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. NCBI nr
Match: XP_008452429.1 (PREDICTED: transmembrane protein 208 homolog [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-19
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKPTYGDDGELLDGGFDMST GICGYMH+VIYIT FVQIMSILS KFWYT L
Sbjct: 68  MAKPTYGDDGELLDGGFDMSTDGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. NCBI nr
Match: ESR41907.1 (hypothetical protein CICLE_v100129242mg [Citrus clementina])

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKPTY DDGEL+DGGFDMSTGGICGY+H+VIYIT FVQ+MSILSEKFWYT L
Sbjct: 68  MAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. NCBI nr
Match: KDO53111.1 (hypothetical protein CISIN_1g0306652mg [Citrus sinensis])

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKPTY DDGEL+DGGFDMSTGGICGY+H+VIYIT FVQ+MSILSEKFWYT L
Sbjct: 68  MAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. ExPASy Swiss-Prot
Match: Q6NYP0 (Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 8.5e-07
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMS-TGGICGYMHNVIYITRFVQIMSILSEKFWYTTLW 55
           MAKP + +DG LLDGG D++   G+  ++ +VI +T  VQ++S LS  FWY  LW
Sbjct: 74  MAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWY--LW 126

[Close]

BLAST of MELO3C010414 vs. ExPASy Swiss-Prot
Match: Q54UB0 (Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem208 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.1e-05
Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           M K TY ++GEL+DGG D++ GG+  Y  ++IY+   +Q + ++S+K  Y  L
Sbjct: 68  MCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLIL 120

[Close]

BLAST of MELO3C010414 vs. ExPASy Swiss-Prot
Match: Q0IHJ0 (Transmembrane protein 208 OS=Xenopus laevis OX=8355 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 2.3e-04
Identity = 19/51 (37.25%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMS-TGGICGYMHNVIYITRFVQIMSILSEKFWY 51
           MA+ ++ +DG LLDGG D++   G+  ++ +++ +T  VQ++S  S  FWY
Sbjct: 74  MAQASFSEDGSLLDGGIDLNMEQGMAEHIKDIVLLTAIVQVLSCFSLYFWY 124

[Close]

BLAST of MELO3C010414 vs. ExPASy TrEMBL
Match: A0A6J1KBQ8 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MA PTYGDDGELLDGGFDMSTGGICGYMH+VIYIT FVQIMSILS KFWYT L
Sbjct: 68  MADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. ExPASy TrEMBL
Match: A0A6J1G433 (transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MA PTYGDDGELLDGGFDMSTGGICGYMH+VIYIT FVQIMSILS KFWYT L
Sbjct: 68  MADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. ExPASy TrEMBL
Match: A0A2H5PT23 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_164720 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKPTY DDGEL+DGGFDMSTGGICGY+H+VIYIT FVQ+MSILSEKFWYT L
Sbjct: 68  MAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. ExPASy TrEMBL
Match: V4SSH1 (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v100129242mg PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKPTY DDGEL+DGGFDMSTGGICGY+H+VIYIT FVQ+MSILSEKFWYT L
Sbjct: 68  MAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. ExPASy TrEMBL
Match: A0A067EDE0 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g0306652mg PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKPTY DDGEL+DGGFDMSTGGICGY+H+VIYIT FVQ+MSILSEKFWYT L
Sbjct: 68  MAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. TAIR 10
Match: AT2G23940.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-18
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKP+  DDGEL+DGGFDM+TGGICGY+H+VIYIT FVQ+ SI++ KFWYT L
Sbjct: 68  MAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYL 120

[Close]

BLAST of MELO3C010414 vs. TAIR 10
Match: AT4G30500.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-16
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGYMHNVIYITRFVQIMSILSEKFWYTTL 54
           MAKP+  D GELLDGGFDMST G+CGY+H+V+YIT FVQ+ SI+S KFWY  L
Sbjct: 68  MAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKFWYAYL 120

The following BLAST results are available for this feature:

BLAST of MELO3C010414 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946520.1	7.1e-19	90.57	transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmemb...	[more]
XP_006428665.2	9.3e-19	86.79	transmembrane protein 208 homolog [Citrus clementina] >XP_006480476.1 transmembr...	[more]
XP_008452429.1	9.3e-19	90.57	PREDICTED: transmembrane protein 208 homolog [Cucumis melo]	[more]
ESR41907.1	9.3e-19	86.79	hypothetical protein CICLE_v100129242mg [Citrus clementina]	[more]
KDO53111.1	9.3e-19	86.79	hypothetical protein CISIN_1g0306652mg [Citrus sinensis]	[more]

BLAST of MELO3C010414 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NYP0	8.5e-07	47.27	Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1	[more]
Q54UB0	2.1e-05	39.62	Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem20...	[more]
Q0IHJ0	2.3e-04	37.25	Transmembrane protein 208 OS=Xenopus laevis OX=8355 GN=tmem208 PE=2 SV=1	[more]

BLAST of MELO3C010414 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBQ8	3.4e-19	90.57	transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE...	[more]
A0A6J1G433	3.4e-19	90.57	transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 ...	[more]
A0A2H5PT23	4.5e-19	86.79	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_164720 PE=3 SV=1	[more]
V4SSH1	4.5e-19	86.79	Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10012...	[more]
A0A067EDE0	4.5e-19	86.79	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g0306652mg PE=3 SV=...	[more]

BLAST of MELO3C010414 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23940.1	1.3e-18	73.58	Protein of unknown function (DUF788)	[more]
AT4G30500.1	1.2e-16	69.81	Protein of unknown function (DUF788)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	SRP-independent targeting protein 2/TMEM208	PFAM	PF05620	TMEM208_SND2	coord: 1..53 e-value: 2.7E-17 score: 63.1
IPR008506	SRP-independent targeting protein 2/TMEM208	PANTHER	PTHR13505	TRANSMEMBRANE PROTEIN 208	coord: 1..53
None	No IPR available	PANTHER	PTHR13505:SF8	BNAA01G06570D PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010414.1	MELO3C010414.1	mRNA