MELO3C010365 (gene) Melon (DHL92) v4

Overview
NameMELO3C010365
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGag-protease polyprotein
Locationchr07: 11020516 .. 11020804 (-)
RNA-Seq ExpressionMELO3C010365
SyntenyMELO3C010365
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAAGGCAAAGAGAACTCCAAGCGAGGATATTTATGAGAAATTTGAGAAGAAGTTGGAAGAATTAAGTCCACTTGAGGATGAAGTAGTGAAACCTTCAAAGACAAAAAGGAAGGTTACAATCAAGAAGCAAGTTTTGAGGGAGCAATTCACCAAAAAGCGAGAAGAAAATGAAAAGAGAGGTCCTAGGAATGAAGAAGTTCAAGAAGAAAAAAAAGGGGACCAAGAAGGTGAAACAGAGGAGCTCTCTGCAAACAACTCTAGATAGAGAATGGGCTCTATTCATTTAA

mRNA sequence

GGCAAGGCAAAGAGAACTCCAAGCGAGGATATTTATGAGAAATTTGAGAAGAAGTTGGAAGAATTAAGTCCACTTGAGGATGAAGTAGTGAAACCTTCAAAGACAAAAAGGAAGGTTACAATCAAGAAGCAAGTTTTGAGGGAGCAATTCACCAAAAAGCGAGAAGAAAATGAAAAGAGAGGTCCTAGGAATGAAGAAGTTCAAGAAGAAAAAAAAGGGGACCAAGAAGGTGAAACAGAGGAGCTCTCTGCAAACAACTCTAGATAGAGAATGGGCTCTATTCATTTAA

Coding sequence (CDS)

GGCAAGGCAAAGAGAACTCCAAGCGAGGATATTTATGAGAAATTTGAGAAGAAGTTGGAAGAATTAAGTCCACTTGAGGATGAAGTAGTGAAACCTTCAAAGACAAAAAGGAAGGTTACAATCAAGAAGCAAGTTTTGAGGGAGCAATTCACCAAAAAGCGAGAAGAAAATGAAAAGAGAGGTCCTAGGAATGAAGAAGTTCAAGAAGAAAAAAAAGGGGACCAAGAAGGTGAAACAGAGGAGCTCTCTGCAAACAACTCTAGATAG

Protein sequence

GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKRGPRNEEVQEEKKGDQEGETEELSANNSR
Homology
BLAST of MELO3C010365 vs. NCBI nr
Match: KAA0035382.1 (gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-30
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0

Query: 1   GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKR 60
           GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTK KVTIKKQVLREQF KKREENEKR
Sbjct: 70  GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKSKVTIKKQVLREQFAKKREENEKR 129

Query: 61  GPRNEEVQEEKKGDQEGETEELS 84
           GPRNEEVQEEKKGDQEGETEELS
Sbjct: 130 GPRNEEVQEEKKGDQEGETEELS 152

BLAST of MELO3C010365 vs. NCBI nr
Match: TYK30659.1 (hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 0

Query: 2   KAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKRG 61
           K+++TPSE++ E+FE+KL+ LSPL+DEVVK SK K+KVTIKK VL+EQF K+REE EK+ 
Sbjct: 19  KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78

Query: 62  PRNEEVQEEKKGDQEGETEELSANNS 88
               EV  E++ D +GE  E    N+
Sbjct: 79  GPLSEVTLEEEEDLKGEKNEPFCGNT 104

BLAST of MELO3C010365 vs. NCBI nr
Match: KGN44432.1 (hypothetical protein Csa_016511 [Cucumis sativus])

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09
Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0

Query: 1  GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENE-K 60
          GK ++TPSE+I E+FE+KLE+LSPLEDEVVKP   K+KVT+KK VL++QF K+REE E K
Sbjct: 37 GKVRKTPSEEICEEFERKLEDLSPLEDEVVKP--LKKKVTVKKSVLKKQFDKRREEKEKK 96

Query: 61 RGP 63
          +GP
Sbjct: 97 KGP 97

BLAST of MELO3C010365 vs. NCBI nr
Match: KAA0038260.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0

Query: 1   GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKR 60
           GKA++TPSE++ E+FE+KL+ LS LEDE+V  SK K+KVTIKK VL+EQF K+REE EK+
Sbjct: 29  GKARKTPSEELVEEFERKLDNLSHLEDEMVNSSKKKKKVTIKKSVLKEQFVKRREEKEKK 88

Query: 61  GPRNEEVQEEKKGDQEGETEELSANNS 88
                EV  E++ D +GE  E    N+
Sbjct: 89  KGPLSEVTLEEEEDLKGEKNEPFCGNT 115

BLAST of MELO3C010365 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 6.0e-07
Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 0

Query: 1   GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKR 60
           GK K    E+ Y++FEK+++E SPLED VV+    KR VT+KK+VLR+QF K+R+E ++R
Sbjct: 66  GKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKRR 125

Query: 61  GPRNEEVQEEKKGDQEGETEE 82
           GP+ E  +E ++ ++EG   E
Sbjct: 126 GPQKESEKEVERSEKEGSLSE 146

BLAST of MELO3C010365 vs. ExPASy TrEMBL
Match: A0A5A7SVU7 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold597G00220 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0

Query: 1   GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKR 60
           GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTK KVTIKKQVLREQF KKREENEKR
Sbjct: 70  GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKSKVTIKKQVLREQFAKKREENEKR 129

Query: 61  GPRNEEVQEEKKGDQEGETEELS 84
           GPRNEEVQEEKKGDQEGETEELS
Sbjct: 130 GPRNEEVQEEKKGDQEGETEELS 152

BLAST of MELO3C010365 vs. ExPASy TrEMBL
Match: A0A5D3E4B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00860 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.2e-10
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 0

Query: 2   KAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKRG 61
           K+++TPSE++ E+FE+KL+ LSPL+DEVVK SK K+KVTIKK VL+EQF K+REE EK+ 
Sbjct: 19  KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78

Query: 62  PRNEEVQEEKKGDQEGETEELSANNS 88
               EV  E++ D +GE  E    N+
Sbjct: 79  GPLSEVTLEEEEDLKGEKNEPFCGNT 104

BLAST of MELO3C010365 vs. ExPASy TrEMBL
Match: A0A5A7T4G8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001100 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0

Query: 1   GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKR 60
           GKA++TPSE++ E+FE+KL+ LS LEDE+V  SK K+KVTIKK VL+EQF K+REE EK+
Sbjct: 29  GKARKTPSEELVEEFERKLDNLSHLEDEMVNSSKKKKKVTIKKSVLKEQFVKRREEKEKK 88

Query: 61  GPRNEEVQEEKKGDQEGETEELSANNS 88
                EV  E++ D +GE  E    N+
Sbjct: 89  KGPLSEVTLEEEEDLKGEKNEPFCGNT 115

BLAST of MELO3C010365 vs. ExPASy TrEMBL
Match: A0A0A0K7W9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09
Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0

Query: 1  GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENE-K 60
          GK ++TPSE+I E+FE+KLE+LSPLEDEVVKP   K+KVT+KK VL++QF K+REE E K
Sbjct: 37 GKVRKTPSEEICEEFERKLEDLSPLEDEVVKP--LKKKVTVKKSVLKKQFDKRREEKEKK 96

Query: 61 RGP 63
          +GP
Sbjct: 97 KGP 97

BLAST of MELO3C010365 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 0

Query: 1   GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKR 60
           GK K    E+ Y++FEK+++E SPLED VV+    KR VT+KK+VLR+QF K+R+E ++R
Sbjct: 66  GKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKRR 125

Query: 61  GPRNEEVQEEKKGDQEGETEE 82
           GP+ E  +E ++ ++EG   E
Sbjct: 126 GPQKESEKEVERSEKEGSLSE 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0035382.12.9e-3097.59gag-protease polyprotein [Cucumis melo var. makuwa][more]
TYK30659.11.3e-0954.65hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa][more]
KGN44432.12.2e-0966.67hypothetical protein Csa_016511 [Cucumis sativus][more]
KAA0038260.12.2e-0954.02protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0041276.16.0e-0746.91protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SVU71.4e-3097.59Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5D3E4B86.2e-1054.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T4G81.1e-0954.02Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00... [more]
A0A0A0K7W91.1e-0966.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1[more]
A0A5A7TGV42.9e-0746.91Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010365.1MELO3C010365.1mRNA