MELO3C010214 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010214
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Nucleoid-associated protein
Location	chr02: 15381192 .. 15387204 (+)
RNA-Seq Expression	MELO3C010214
Synteny	MELO3C010214

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACTGTTTGTTTATTGGTCTGTCTTTATGGTTATATGAACGGCGGGTGATGTTTAGGCTTAGTATCTCCAAGCGAAAATCTTCTTTATAGTTTATCCTCTCCACTTTCTATTCAGCACATTCACAGCGGCTTTGAGCAATGGCGTCGACAATATCTCTGAGTGCTCAGCTGCCAAATCTCCGAGGAATTTCTGATTTGAAGAAACGAAGTTAGTCCCATTCTTCAACTCTTTTCTCTCTTTTTCATTTTCTTTTGTTTGCTGATACCTTAGGAATTTGAGTTTTTCGATCCATTGCTGTATCTCTGAATTTAATTCGTTGCTTGGGACTTACTTCTCTATTGTATAGTTTGTACCTACTCAATCTAACGGTGGGATCTAAGTTGGTGCGGGTGGTTAGTATGGCGTAGTTTGGGAAGATTTGCCAATCGGTTGAAGTTTAGACCCTAAATAGAATTGTCTGGCGGTGTCCTTAGTTCTTATTACTGGATGGGTTATGTTCATTTCTATTCAAGAAATTATTGTTTTTTCGTATAATTAAAGTAAAATTGCGATAGGCGAGTGGGGGAGATTCTCTTGATTTCAACTTGGAGGCAGATGCGTCTTGTGTAGTCTATTGAACTTAAAAGAGAAAGGCTGTGTTCTGGGTAATTTACTTGAAAACTATTTAATAAGTTTGGATAGGCCTCAAAACTTTCTACCTAACTTAGACGTGAGTAGTGTTTTATAAAGCTCAAGGTGCCAAAGAAAAAGAAAAAACGGAATTTTGCATTTAGGCTTAATAAATTTGATTCTTTTTTTAGTTAATAAAGAAGGACAAGCCCTTATTATTACTATTTTCTTAAAATAATAAAAAAGCCTCACAGCCCAGAGGAGTCGCGCCTTATTTTGTGAACCTATCTTTCTTTTAAAGGCGTGGTGCCTTTTAAACCCCTGGTTGTGAGAGTAATTTCGTGGAAAAGTTTATTGAGAAGGAATGGCATGAACCTGTCAAGTTTAATTCTTAATTTATAGTATGGACTGAAGCTGGTTGCATATCTGATAATGCCAATGTCAGAACTGAATAAATCCCATGTCTGCTTCATGAGAACTCTTTAACAAACTAGATACATCAAAAGAAACAGGGCTGGTTTCAAATGAGTTTTTAAGTGCTGAAACAAGCGTTTTCAATTGCACAAAGTGTTTTTACGTATTCAGGAAGTCATTCCAAACAGAACCTTAGCTGTGTAGGACTGTTTTAGAATTTAGTGTTTTATTTTCTGTAATTTGCAATTTGAATATAATATTTTGGAGTTTGGACGATAAAAATTTCCAATTTTCCATTCTGAAATTGGAAACGAAGTCCACTCTTTGTGAAATTTGATTGTACACAATACACTTATTAATGCATGATTATCTTTTTCTGTCTGCCTCTTACAGGCAACTTAAATTTGATGTCAAATATAGTTGGTACACGACTCTCACCTTATGGTCCTTGGAAAGTTGAAAAAAATAATAGATCTCTTTGCGTTTATGGTCTATTTGGAGGAAAAAAGGATGAGGAGAAGAGTGATGATGCACCTTCAAAGGTAGAACTTTTATCTGCAATATGATTATAAACATCATAAATTTTGAATCATGCTCAACAAAATTGTCATTTTCAGTAATTTAGATATAAACAGAAATGTTTATCATATTTAAGAGACTGAAAGTGACTTTTGTTTGCAAGTGAGGTGAGACCATCGTTACTTACATTCTAACTTTTTTTAGGCAGGAATCTTTGGAAACATGCAGAAGTTATATGAAACTGTGAGGACAGCGCAAAAGGTTGTCCAAGTAGAGGCAGTACGTGTACAAAAAGAACTTGCAGCGTAAGACCAAACAAGTTAAATAAATGTAATGCCACTTGGAGATGTCTTTATCTGTTTTACGAAGTTGTCTGAATCTTTTTTTTTCCCTTCCATGTTTCTGTTTTCCAGGGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTATGTCCTGCCTTCCTCTCTTGCATCCAGTTCATTTTCACTTTGCCAAGAACTATACGATCAAAAAGGTTGTTAGAGAAGTGAACATGTGCTTCATTTTTGCTTACAATTGTAAATATGAACAGATTCTAGAGGAATGACTTGAATTTATCTTGGGTACTACTTAAAAGGATGCCATGTCTAGAGTTTGTGATTACTAATCTTTCTATGTCGTTTTAAGATGATAAGTGTATTCTATCATTATATTCAACCGGGTTGTATTGGAATTAAAATCTCTTGGGGTCATCTCCCTGAGATGTTAATTGTTCTGAAATATTTTTGTTCCATCAATCGATAGTGTTCCGGTGTTGATTCCCATGGACATGAAAAGGACAGCGAATTTTGAAAAAGAAAAAAATCACGATTTATCGAAAGAATTAAATAAGCATTGAGCTTGCGACAGAAGGTTTTTGATTTGACAATTGGTTTCATACAAGGCCTAGCATAGCCTTTTCATTTAATGAAAATTATTATATAAAAGAATGGGTTCATATCATGTTTGAATATCTCCTCATATCTACCCTAATATTTTTCTGTCGACTAATATAGGTGACATTATCCGGGAATCAGCAACCTATTCGCACAGAGATAACGGAGGCTGCAATGGAATTAGGACCAGAAGTGAGTATGCACGATGCTGTAGACTGTAATGCACTCTAACATTTAGCATTTTTACATTGAACTTCTCTTTACATCCACTCAAGTCACAACTTAATGCTGCACCACCTGTCATGTCCTCAATCCAAGCTTGGAGTATATCTTCTCTTGGTGCTAGGTGGAATAATGACTTTTCACACCACGTGAGTTTGAAAATTGGCTGGCTACAGGAATAAGACCCGCCAACATTGGCACATGGCTCAAAAAAGTTTGACAAGTTGACAACCATACTTGAATATTTTAAGAATAGTTACCAGTAACATTTGTAAAAGTTATGGTCCCTAGGATAGTTCTTGAATGGGTGTTTTCCATTGTGAAATAGGCCAGAAAATTTCTGAACGTGGTTAATGATGGATTTCATATTCCAAAAAAAGAAATATTCAGATCTTTACTTTCTTATGCAGAAACTTTCCCTTCTTGTTACTGAAGCTTATCAGGACGCACATCAGAAGAGCGTTCAGGTAAGAATTCTTCCAGTAATTTAATTAACAAGTTTTGTTTCTTCAGAACTGACTATTGACTCTATGATTCTCAGGCCATGAAACAAAGAATGAGTGATCTTGCCCAGAGCTTAGGCATGCCCCAGGGACTCAGTGAGGGATTAAAGTAGACATTTTATGTCCGTCGAGCATCAGTTTTGTGAACACAGCGGCAGCGGGACAACTTAATTGTAATCTGACCTCGGCAGCAAATTCCATATTAGTTTTTACTGGTGAACTAAATGTTTGGGAACGAACCTTGTTCTCCATCTCTAAATGTAAAAAAGACAAGCTATGATGTTTATTGTGGAATCAGAACAAAGAATCTAAAGAATGAGATGAGAACGAGATTGTCAAATTGTGCTTGTATCGACGCTGGCATTTGAATTCTTGAAAAGGAGCTTAAAACTTCTACTTTGTGTAATCACGGGCAAATGTTAGTAAAATAATCTTTGTTCAACCTTTCCATTTGGAACTTGAAATGGGTAATAATATTGACTTGGTGTATCCAATATAAATTGTAGAATGAATACGATTCTAGTCCCCTAAATCTCAGCACTGTTGTGTACTGGGATTGTTTCAAATTTATGACCAATATATATCTAGAAACGAGACAAATGACCAGTTTCTTCTTCTGTGTTCATTGGTCTGTTTCTTTGCAGATATTAAATCAAGATCTTGGCAGATGTTTTCCTGCTAAAAACGATCTGAAAAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTAGCAAAGGTTAGCCCTTCATAAACCTCTGTCCATCCACCAACCTGATAAGTACATTTCATTCAGTTTGATTAAAGCATTCATTCAAATATAGAACAAAACAAAGGATAGAGATCTTATATATAACCTGTCCTCGGGAGTACCATGGATACCATCGAGTTTTAATGTGGAGGTTGAGATGGCTTAGGGCAAATCTTGTGGCTGTCACTGGAACCACTGAATCTGTATCCCCGCTGCATTTTTTCACATGAAATTGTCATGGTGAAGGAGTCTTAAGGTCGAATAAATTTTGAGGGTGTATCGATTTAAACCTCGAACTTTTGTTTGTGTTCCGATTTACGCTCTTCTCTAGATTTCTTTTCACCATCATCATGTGAAACTCATGACTCGAGTCAATTACACACCAAAATCTAAGTCAATCAATTTAGACATTGAATTACCTTTACTTTTGAAAATGATCAGTGAATTGATTTTCAATTGTCTGTAGATTTCTTTAAATATCGGTTTTACAAAATCGACAATTAGAGTGAGTGCATGTATTCTTTTAGGAAATTTTGACTAAGAATCTAAATTAATTTATTTATGAAAGTTTAGAAGTTTAGTTAATACAATTATAAATTTCACGTAAGGTTTTCTTGAGTGGAACGTAATGAAGTGGGTAAATTGATACAATTTCCAAAATTTAGGGGAATAAATTGATATTTCTCATTTACTTAGATATTCGGATAAAACTAGACTTCTCCACCCTTTAAAATTACTACACATGGATTGAAAAACACGGAAAACGAGAAACAAGGATTTATTATGTGGAAAGACTAAAGCTTTTCAAATCTAACCTGAAAACCCATATCCTTAAACCTGCTGCAATGAGCTCCTTGTATGTAGGCAACATGGATTCTTGGGAATCCTTCCAGTTCTTAATAAGAACATCACTGTCACCCAAAAAAAGAAAAACAAACCTTTATAGCTGATAAAGTTATAAGTTTTGGCCAAGGAAACTGAGAAACTTGCAATGCAACAAACTCACCTGCAAGCAGTCCATTTGTAGGGAATTCCAGTAACATTGGCATGCATTGCCAATTGAACCTCTTTAAGATTATAATACTTCTCTGCATAATTCTCAGTACATGGATCGTACCCTGACACCCTCCGCCGAAGAAGAGAGCTTTTGAACCTGATAGTGGATGCCCCGACCGCTGCCACCGAGTTGTTCGGAACAATGGTGGGACATTTGGGAGTATAGATACTGTACTGATCCACATTGCCAAACTCGTGGTTCATGGCATAGCCAACAACTTCGTCGCATTGTTGGGAAGTCTTGTCTGAGGTGAAATTGCAGTGCTTGAGGATGGAGTTGTATGTTGTGTCTGAGATCATGGCATGACTCCACCAATATGTCACCGTTCCGAGGGCGTCGTAGTTGGTATCAGTTACTGCATTTCCCACCTGCCATTTTAAAAAATTGTTACGAGTCCATTGCCTCATACTTCTTATTACTCTGAATAACAAACGCATATATAGTTCAGTTTTCTGTTCTTACAAGAAAGCCTTTGAGGTTGATGAAGGATTGAGAATTGGCTTTGTTGTAGTCAAGAATCTTCTTTGCCAATTGAGGAACGTAGTGCCCTATAGCCAGCAAAATTACCATCGGAAAGATTAGGTTTCGTCGGATAACTATTTGGAGTTTAACTACGGCTTTAAAATGTTTCCTAATCAGATTGATGAAAACCATGGCAAAGAAGTCGTAGGAAAACAAGGACAGATTTAGAAGCAAAAACCAAGTTTGAGAATGTAGTGAAAATATTAAATTTTACGTGAGTGGACTTACCAGCATAACTCTCCCCGGAAATGTAGAATTCTCTGTATTTATAATGTGGAAATCTGGACATCCATTGAATGAGGAAAATAAGAGCATCTTCAGCAGTACGGTTGTCACCGGAGTCTTCAAGGTTGGAGGTGGTGTTTGTGTAGGAGAATCCAACTCCGGCAGGTGATTCCAGAAACAGAAGATTTGAATCTGAGAAAAATGGTGTTTTCTTTGTAATGAGAGAGTTTAATCAAAGTTTAAAAGA

mRNA sequence

TACTGTTTGTTTATTGGTCTGTCTTTATGGTTATATGAACGGCGGGTGATGTTTAGGCTTAGTATCTCCAAGCGAAAATCTTCTTTATAGTTTATCCTCTCCACTTTCTATTCAGCACATTCACAGCGGCTTTGAGCAATGGCGTCGACAATATCTCTGAGTGCTCAGCTGCCAAATCTCCGAGGAATTTCTGATTTGAAGAAACGAAGCAACTTAAATTTGATGTCAAATATAGTTGGTACACGACTCTCACCTTATGGTCCTTGGAAAGTTGAAAAAAATAATAGATCTCTTTGCGTTTATGGTCTATTTGGAGGAAAAAAGGATGAGGAGAAGAGTGATGATGCACCTTCAAAGGCAGGAATCTTTGGAAACATGCAGAAGTTATATGAAACTGTGAGGACAGCGCAAAAGGTTGTCCAAGTAGAGGCAGTACGTGTACAAAAAGAACTTGCAGCGGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTGACATTATCCGGGAATCAGCAACCTATTCGCACAGAGATAACGGAGGCTGCAATGGAATTAGGACCAGAAAAACTTTCCCTTCTTGTTACTGAAGCTTATCAGGACGCACATCAGAAGAGCGTTCAGATATTAAATCAAGATCTTGGCAGATGTTTTCCTGCTAAAAACGATCTGAAAAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTAGCAAAGTACATGGATCGTACCCTGACACCCTCCGCCGAAGAAGAGAGCTTTTGAACCTGATAGTGGATGCCCCGACCGCTGCCACCGAGTTGTTCGGAACAATGGTGGGACATTTGGGAGTATAGATACTGTACTGATCCACATTGCCAAACTCGTGGTTCATGGCATAGCCAACAACTTCGTCGCATTGTTGGGAAGTCTTGTCTGAGGTGAAATTGCAGTGCTTGAGGATGGAGTTGTATGTTGTGTCTGAGATCATGGCATGACTCCACCAATATGTCACCGTTCCGAGGGCGTCGTAGTTGGTATCAGTTACTGCATTTCCCACCTGCCATTTTAAAAAATTGTTACGAGTCCATTGCCTCATACTTCTTATTACTCTGAATAACAAACGCATATATAGTTCAGTTTTCTGTTCTTACAAGAAAGCCTTTGAGGTTGATGAAGGATTGAGAATTGGCTTTGTTGTAGTCAAGAATCTTCTTTGCCAATTGAGGAACGTAGTGCCCTATAGCCAGCAAAATTACCATCGGAAAGATTAGGTTTCGTCGGATAACTATTTGGAGTTTAACTACGGCTTTAAAATGTTTCCTAATCAGATTGATGAAAACCATGGCAAAGAAGTCGTAGGAAAACAAGGACAGATTTAGAAGCAAAAACCAAGTTTGAGAATGTAGTGAAAATATTAAATTTTACGTGAGTGGACTTACCAGCATAACTCTCCCCGGAAATGTAGAATTCTCTGTATTTATAATGTGGAAATCTGGACATCCATTGAATGAGGAAAATAAGAGCATCTTCAGCAGTACGGTTGTCACCGGAGTCTTCAAGGTTGGAGGTGGTGTTTGTGTAGGAGAATCCAACTCCGGCAGGTGATTCCAGAAACAGAAGATTTGAATCTGAGAAAAATGGTGTTTTCTTTGTAATGAGAGAGTTTAATCAAAGTTTAAAAGA

Coding sequence (CDS)

ATGGCGTCGACAATATCTCTGAGTGCTCAGCTGCCAAATCTCCGAGGAATTTCTGATTTGAAGAAACGAAGCAACTTAAATTTGATGTCAAATATAGTTGGTACACGACTCTCACCTTATGGTCCTTGGAAAGTTGAAAAAAATAATAGATCTCTTTGCGTTTATGGTCTATTTGGAGGAAAAAAGGATGAGGAGAAGAGTGATGATGCACCTTCAAAGGCAGGAATCTTTGGAAACATGCAGAAGTTATATGAAACTGTGAGGACAGCGCAAAAGGTTGTCCAAGTAGAGGCAGTACGTGTACAAAAAGAACTTGCAGCGGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTGACATTATCCGGGAATCAGCAACCTATTCGCACAGAGATAACGGAGGCTGCAATGGAATTAGGACCAGAAAAACTTTCCCTTCTTGTTACTGAAGCTTATCAGGACGCACATCAGAAGAGCGTTCAGATATTAAATCAAGATCTTGGCAGATGTTTTCCTGCTAAAAACGATCTGAAAAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTAGCAAAGTACATGGATCGTACCCTGACACCCTCCGCCGAAGAAGAGAGCTTTTGA

Protein sequence

MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGGKKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQDLGRCFPAKNDLKSVKALCGWINGTSCPAPLTVAKYMDRTLTPSAEEESF

Homology

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BLAST of MELO3C010214 vs. NCBI nr
Match: XP_008443852.1 (PREDICTED: nucleoid-associated protein At2g24020, chloroplastic-like [Cucumis melo] >KAA0035094.1 nucleoid-associated protein [Cucumis melo var. makuwa] >TYJ95984.1 nucleoid-associated protein [Cucumis melo var. makuwa])

HSP 1 Score: 320.9 bits (821), Expect = 8.7e-84
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120
           KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK
Sbjct: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120

Query: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQ 167

[Close]

BLAST of MELO3C010214 vs. NCBI nr
Match: XP_004146679.1 (nucleoid-associated protein At2g24020, chloroplastic [Cucumis sativus] >KGN65167.1 hypothetical protein Csa_019766 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 8.2e-82
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTISLSAQLPNLRGISD KKRSNLN MSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDFKKRSNLNSMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120
           KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK
Sbjct: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120

Query: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSV  + Q
Sbjct: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVLAMKQ 167

[Close]

BLAST of MELO3C010214 vs. NCBI nr
Match: XP_038879413.1 (nucleoid-associated protein At4g30620, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 155/168 (92.26%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTISLSAQLPNLRG+SD KKRSNLN +SNI+G R+SPYGPWKVEK+NRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60

Query: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KKD EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI
Sbjct: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           KVTLSGNQQP+RTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQ 168

[Close]

BLAST of MELO3C010214 vs. NCBI nr
Match: XP_038879412.1 (nucleoid-associated protein At4g30620, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-76
Identity = 155/174 (89.08%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRS------NLNLMSNIVGTRLSPYGPWKVEKNNRSLCV 60
           MASTISLSAQLPNLRG+SD KKRS      NLN +SNI+G R+SPYGPWKVEK+NRSLCV
Sbjct: 1   MASTISLSAQLPNLRGMSDFKKRSCMPLTGNLNSVSNIIGVRISPYGPWKVEKHNRSLCV 60

Query: 61  YGLFGGKKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGY 120
           YGLFGGKKD EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGY
Sbjct: 61  YGLFGGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGY 120

Query: 121 CEGELIKVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           CEGELIKVTLSGNQQP+RTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 CEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQ 174

[Close]

BLAST of MELO3C010214 vs. NCBI nr
Match: XP_022932159.1 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022965200.1 nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-76
Identity = 151/168 (89.88%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTIS+SAQ+PNLRGISD KKRSNLN MS I+GTR+SPYGPWKVEKNNRSLCV GLFGG
Sbjct: 1   MASTISISAQVPNLRGISDWKKRSNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGLFGG 60

Query: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KK+ EEKSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELA AEFDGYCEGELI
Sbjct: 61  KKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           KVTLSGNQQP+RTEITEAAM+LGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 KVTLSGNQQPLRTEITEAAMKLGPEKLSLLVTEAYQDAHQKSVQAMKQ 168

[Close]

BLAST of MELO3C010214 vs. ExPASy Swiss-Prot
Match: Q9M098 (Nucleoid-associated protein At4g30620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g30620 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.9e-43
Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 48  NNRSLCVYGLFGGKKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAA 107
           NNRSL V GLFGG K + K +D  SKAGI GNMQ LYETV+ AQ VVQVEAVRVQKELA 
Sbjct: 43  NNRSLRVNGLFGGGKKDNK-EDGQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAV 102

Query: 108 AEFDGYCEGELIKVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 167
           AEFDGYC+GEL+KVTLSGNQQPIRT+IT+AAMELG EKLSLLVTEAY+DAH KSV  + +
Sbjct: 103 AEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSEKLSLLVTEAYKDAHSKSVLAMKE 161

[Close]

BLAST of MELO3C010214 vs. ExPASy Swiss-Prot
Match: O82230 (Nucleoid-associated protein At2g24020, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STIC2 PE=1 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 7.8e-43
Identity = 91/125 (72.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 43  WKVEKNNRSLCVYGLFGGKKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQ 102
           +K +   RSL V GLFGG   +  S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVRVQ
Sbjct: 38  YKSKNGYRSLRVNGLFGGGNKDNNSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVRVQ 97

Query: 103 KELAAAEFDGYCEGELIKVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSV 162
           KELAAAEFDGYC GEL+KVTLSGNQQPIRT+ITEAAMELG EKLS LVTEAY+DAH KSV
Sbjct: 98  KELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSEKLSQLVTEAYKDAHAKSV 157

Query: 163 QILNQ 168
             + +
Sbjct: 158 VAMKE 162

[Close]

BLAST of MELO3C010214 vs. ExPASy Swiss-Prot
Match: Q5N376 (Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=syc1054_d PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 78  GNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPIRTEITEA 137
           G M++L +  + AQ+ VQ  A +VQ++L   E +G  +G L+KV +SGNQ+P+R EI   
Sbjct: 11  GKMKELADAFKKAQQ-VQEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPE 70

Query: 138 AMELGPEKLSLLVTEAYQDAHQKSVQILNQDL 170
           A+  G E LS LV  A +DA+QKS   + + +
Sbjct: 71  ALNEGAEVLSELVAAAMKDAYQKSTAAMKEKM 101

[Close]

BLAST of MELO3C010214 vs. ExPASy Swiss-Prot
Match: Q8GMT0 (Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=Synpcc7942_0464 PE=3 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 78  GNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPIRTEITEA 137
           G M++L +  + AQ+ VQ  A +VQ++L   E +G  +G L+KV +SGNQ+P+R EI   
Sbjct: 11  GKMKELADAFKKAQQ-VQEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPE 70

Query: 138 AMELGPEKLSLLVTEAYQDAHQKSVQILNQDL 170
           A+  G E LS LV  A +DA+QKS   + + +
Sbjct: 71  ALNEGAEVLSELVAAAMKDAYQKSTAAMKEKM 101

[Close]

BLAST of MELO3C010214 vs. ExPASy Swiss-Prot
Match: B7K422 (Nucleoid-associated protein PCC8801_2554 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=PCC8801_2554 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 36/88 (40.91%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 78  GNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPIRTEITEA 137
           G +++L E    AQ+ VQ  A ++Q+EL   E +G+ EG+L+KV +SGNQ+P    I   
Sbjct: 12  GKIKELQEAFAKAQQ-VQAGAQQLQQELEQMEIEGFSEGKLVKVIMSGNQEPRSVTILPE 71

Query: 138 AMELGPEKLSLLVTEAYQDAHQKSVQIL 166
           A+E G ++LS LVT+A +DA+ +S + +
Sbjct: 72  ALEKGADELSQLVTDAMKDAYTQSTETM 98

[Close]

BLAST of MELO3C010214 vs. ExPASy TrEMBL
Match: A0A5A7SUZ8 (Nucleoid-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00540 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 4.2e-84
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120
           KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK
Sbjct: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120

Query: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQ 167

[Close]

BLAST of MELO3C010214 vs. ExPASy TrEMBL
Match: A0A1S3B9T2 (nucleoid-associated protein At2g24020, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487347 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 4.2e-84
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120
           KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK
Sbjct: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120

Query: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQ 167

[Close]

BLAST of MELO3C010214 vs. ExPASy TrEMBL
Match: A0A0A0LWF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256760 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.0e-82
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTISLSAQLPNLRGISD KKRSNLN MSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDFKKRSNLNSMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120
           KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK
Sbjct: 61  KKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIK 120

Query: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSV  + Q
Sbjct: 121 VTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVLAMKQ 167

[Close]

BLAST of MELO3C010214 vs. ExPASy TrEMBL
Match: A0A6J1HN29 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465126 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 151/168 (89.88%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTIS+SAQ+PNLRGISD KKRSNLN MS I+GTR+SPYGPWKVEKNNRSLCV GLFGG
Sbjct: 1   MASTISISAQVPNLRGISDWKKRSNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGLFGG 60

Query: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KK+ EEKSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELA AEFDGYCEGELI
Sbjct: 61  KKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           KVTLSGNQQP+RTEITEAAM+LGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 KVTLSGNQQPLRTEITEAAMKLGPEKLSLLVTEAYQDAHQKSVQAMKQ 168

[Close]

BLAST of MELO3C010214 vs. ExPASy TrEMBL
Match: A0A6J1EW88 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438476 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 151/168 (89.88%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60
           MASTIS+SAQ+PNLRGISD KKRSNLN MS I+GTR+SPYGPWKVEKNNRSLCV GLFGG
Sbjct: 1   MASTISISAQVPNLRGISDWKKRSNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGLFGG 60

Query: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KK+ EEKSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELA AEFDGYCEGELI
Sbjct: 61  KKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 168
           KVTLSGNQQP+RTEITEAAM+LGPEKLSLLVTEAYQDAHQKSVQ + Q
Sbjct: 121 KVTLSGNQQPLRTEITEAAMKLGPEKLSLLVTEAYQDAHQKSVQAMKQ 168

[Close]

BLAST of MELO3C010214 vs. TAIR 10
Match: AT4G30620.1 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 175.6 bits (444), Expect = 4.2e-44
Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 48  NNRSLCVYGLFGGKKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAA 107
           NNRSL V GLFGG K + K +D  SKAGI GNMQ LYETV+ AQ VVQVEAVRVQKELA 
Sbjct: 43  NNRSLRVNGLFGGGKKDNK-EDGQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAV 102

Query: 108 AEFDGYCEGELIKVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQILNQ 167
           AEFDGYC+GEL+KVTLSGNQQPIRT+IT+AAMELG EKLSLLVTEAY+DAH KSV  + +
Sbjct: 103 AEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSEKLSLLVTEAYKDAHSKSVLAMKE 161

[Close]

BLAST of MELO3C010214 vs. TAIR 10
Match: AT2G24020.1 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 175.3 bits (443), Expect = 5.5e-44
Identity = 91/125 (72.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 43  WKVEKNNRSLCVYGLFGGKKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQ 102
           +K +   RSL V GLFGG   +  S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVRVQ
Sbjct: 38  YKSKNGYRSLRVNGLFGGGNKDNNSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVRVQ 97

Query: 103 KELAAAEFDGYCEGELIKVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSV 162
           KELAAAEFDGYC GEL+KVTLSGNQQPIRT+ITEAAMELG EKLS LVTEAY+DAH KSV
Sbjct: 98  KELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSEKLSQLVTEAYKDAHAKSV 157

Query: 163 QILNQ 168
             + +
Sbjct: 158 VAMKE 162

[Close]

BLAST of MELO3C010214 vs. TAIR 10
Match: AT2G24020.2 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 175.3 bits (443), Expect = 5.5e-44
Identity = 91/125 (72.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 43  WKVEKNNRSLCVYGLFGGKKDEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQ 102
           +K +   RSL V GLFGG   +  S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVRVQ
Sbjct: 36  YKSKNGYRSLRVNGLFGGGNKDNNSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVRVQ 95

Query: 103 KELAAAEFDGYCEGELIKVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSV 162
           KELAAAEFDGYC GEL+KVTLSGNQQPIRT+ITEAAMELG EKLS LVTEAY+DAH KSV
Sbjct: 96  KELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSEKLSQLVTEAYKDAHAKSV 155

Query: 163 QILNQ 168
             + +
Sbjct: 156 VAMKE 160

The following BLAST results are available for this feature:

BLAST of MELO3C010214 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443852.1	8.7e-84	98.20	PREDICTED: nucleoid-associated protein At2g24020, chloroplastic-like [Cucumis me...	[more]
XP_004146679.1	8.2e-82	96.41	nucleoid-associated protein At2g24020, chloroplastic [Cucumis sativus] >KGN65167...	[more]
XP_038879413.1	1.1e-78	92.26	nucleoid-associated protein At4g30620, chloroplastic isoform X2 [Benincasa hispi...	[more]
XP_038879412.1	1.0e-76	89.08	nucleoid-associated protein At4g30620, chloroplastic isoform X1 [Benincasa hispi...	[more]
XP_022932159.1	3.0e-76	89.88	nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita ...	[more]

BLAST of MELO3C010214 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M098	5.9e-43	76.67	Nucleoid-associated protein At4g30620, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
O82230	7.8e-43	72.80	Nucleoid-associated protein At2g24020, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
Q5N376	3.0e-10	41.30	Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / ...	[more]
Q8GMT0	3.0e-10	41.30	Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain P...	[more]
B7K422	3.9e-10	40.91	Nucleoid-associated protein PCC8801_2554 OS=Rippkaea orientalis (strain PCC 8801...	[more]

BLAST of MELO3C010214 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SUZ8	4.2e-84	98.20	Nucleoid-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3B9T2	4.2e-84	98.20	nucleoid-associated protein At2g24020, chloroplastic-like OS=Cucumis melo OX=365...	[more]
A0A0A0LWF8	4.0e-82	96.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256760 PE=4 SV=1	[more]
A0A6J1HN29	1.5e-76	89.88	nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbit...	[more]
A0A6J1EW88	1.5e-76	89.88	nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbit...	[more]

BLAST of MELO3C010214 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30620.1	4.2e-44	76.67	Uncharacterised BCR, YbaB family COG0718	[more]
AT2G24020.1	5.5e-44	72.80	Uncharacterised BCR, YbaB family COG0718	[more]
AT2G24020.2	5.5e-44	72.80	Uncharacterised BCR, YbaB family COG0718	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004401	Nucleoid-associated protein YbaB/EbfC family	PFAM	PF02575	YbaB_DNA_bd	coord: 91..167 e-value: 1.4E-13 score: 50.9
IPR004401	Nucleoid-associated protein YbaB/EbfC family	PANTHER	PTHR33449	NUCLEOID-ASSOCIATED PROTEIN YBAB	coord: 3..166
IPR036894	Nucleoid-associated protein YbaB-like domain superfamily	GENE3D	3.30.1310.10		coord: 76..175 e-value: 4.7E-24 score: 86.5
IPR036894	Nucleoid-associated protein YbaB-like domain superfamily	SUPERFAMILY	82607	YbaB-like	coord: 91..168
None	No IPR available	PANTHER	PTHR33449:SF6	SUBFAMILY NOT NAMED	coord: 3..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010214.1	MELO3C010214.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding