MELO3C010063 (gene) Melon (DHL92) v4

Overview
NameMELO3C010063
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr02: 12760466 .. 12762569 (-)
RNA-Seq ExpressionMELO3C010063
SyntenyMELO3C010063
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGACGTTGCTTCCTAATTTTGTGCCATCTACTACGAACTAGGGCCGATTTAGAATCTACTGAACACGTGGACGTTGAGGAGATGGTCGCCCTCTTTCTTCATGTGCTAGCACACGATGTGAAGAACCGACAGATCCAAAGGGAGTTCGTTAGGTCGAGCGAGATAGTCCCCCAACATTTCAACATGGTGTTGATGGCCGTTCTTCGACTACATGACGAGTTATTGGCCACACCACAACCTATAACGAGCGGATGCATAGACATGAGGTGGCATTGTTTCGAGGTTAGGCGTAAAGAACTTACCGTGTCTTTGACTAACTTTTCAAAGTTATGCAAAATAAGAAACTGTGTTCCATATTTGTTGCAGAATTGCATTGGAGCACTTGACGACATGTACATCAAAGTTAACGTGTCAGCAGTGGATAGACCAAGGTATCGCACACGAAAGGGTGAAGTGGCGACAAATTTCCTCGGCGTATGCGATACGAAGGGGGATTTCGTTTTCATTTTAGCCGGTTGGGAAGGATCGGCCGCTAACTCACGTAATTTAAGAGATGCGCTTTCTCGACCTAACGGTCTAAAGGTTCTGAAGGGTGAGATATATTTTTGGACTTTAACTGGGTAAACTTGTATGTCATCTGTTTTTTATGTATTCATTTACCACCTTAACAAAATCGAACAACATACTCGCAGGGTATTACTACCTGTGCTACGCAGGTTAACCAAATACAAAGGGTTTTCTAGTGCCTTATAAGGGCCAACGTTATCATCTACAAGAGTGGCGAGGTACCGGAAATGCTCCTGAGACACCGAAAGAGTTCTTTAACATGAAACATTCTAGCGCATGGAATGTCATTGAAAGAGCGTCCGGTCTGTTGAAGGGATGTTGGGCAATACTACGTGAAAAGTCCTACTACCCAGTTGAAGTCCAATGTCCGACTATCATGGCTTGTTGTCTCCTTCATAATTTAATAAATCGGGAGATAACTTACATCAACGAATTGGATGACGAAGACGATGGTGACTCGACACATGCAACTACTAGTGGGGATGACATCACATACATTGAGCCCTCAAACGAATGGACTGAATGGCGTGATGCGCTTGCTTCCTCGATGTTCACGGAATGGCAATTGCGTAATCAGTAGTATCGTGTCATTTATGTTATTGTCTTCTTCGTTTACCGTTCTGTATTATGTAACTCTTCATTTCAATTTACCGTCCTCATATTTTATGTACTGATACTTGGTTTCGAAAGATGTATGTCTATATGTTTAATTACCTTACTGCTTAATTGGATAACATGTTTGATGTCTTCTGTTTTTAAAATATATTTACTCATTGGATGTATCGTATACGACGTGTAATGATTCATTTTTTGTATCAGAATGACAAGTTCTTCTAGGAGCCTAAAGCATTCCTGAACACATGCAGAGGAGGTGTGCCTAATAGACTGTCTCGTGGACTTGGTTAACGTGGGGGGGGGGGGGTTGGAGGTTGGACAACGGGATCTTTCGGCCTAGTTATTTAGGACAGCTAGTGAGGATGTTAGGGGAGAGAATGGTCGGTTGCAGTTTGACGACGACCGTCATCTAAAGTCGAATAAAGTTGTTGAAGAAGACGTTTCAGGCCATTGCGGAGATGAGGAGCCCAGCAGATAGTGGCTTTGGCTGGAACGATGACGTCAAGTGCATCATCGCTAAGAGGGACGTGTTCGATCATTGGGTCCGGGTAAGAGTATGAACATAATTATATGACTAACTGGATTTTATGGAATACTAAATGCTTTGTTATTTTTTTTTTTTTGTGTTTTTTTCCAGACGCACCCTATAGCAGAAGGACTCCTAAACAAGCCATTTCTGCATTACGACGCACTGTCTTACGTGTTCGAAAAAGATCGAGCCACGAAGGCCCGTGTGAAGACCTTTGCAGACATCAGTTTAAACGTGTCGGCCAGCTACGATAGTGTCCCCACAGAGGATGGCCTCGACATGGAGTTCCCCGCTATGTGCAATCCGAGGATAAACATGTCCCCTAAGGACATAATGGGCGGTAGATCAGGCCGGTCGAGTGATGGTAGAACGGGCTCTAGCAGATAG

mRNA sequence

ATGGACAGACGTTGCTTCCTAATTTTGTGCCATCTACTACGAACTAGGGCCGATTTAGAATCTACTGAACACGTGGACGTTGAGGAGATGGTCGCCCTCTTTCTTCATGTGCTAGCACACGATGTGAAGAACCGACAGATCCAAAGGGAGTTCGTTAGGTCGAGCGAGATAGTCCCCCAACATTTCAACATGGTGTTGATGGCCGTTCTTCGACTACATGACGAGTTATTGGCCACACCACAACCTATAACGAGCGGATGCATAGACATGAGGTGGCATTGTTTCGAGAATTGCATTGGAGCACTTGACGACATGTACATCAAAGTTAACGTGTCAGCAGTGGATAGACCAAGGTATCGCACACGAAAGGGTGAAGTGGCGACAAATTTCCTCGGCGTATGCGATACGAAGGGGGATTTCGTTTTCATTTTAGCCGGTTGGGAAGGATCGGCCGCTAACTCACGTAATTTAAGAGATGCGCTTTCTCGACCTAACGGTCTAAAGGGCCAACGTTATCATCTACAAGAGTGGCGAGGTACCGGAAATGCTCCTGAGACACCGAAAGAGTTCTTTAACATGAAACATTCTAGCGCATGGAATGTCATTGAAAGAGCGTCCGGTCTGTTGAAGGGATGTTGGGCAATACTACGTGAAAAGTCCTACTACCCAGTTGAAGTCCAATGTCCGACTATCATGGCTTGTTGTCTCCTTCATAATTTAATAAATCGGGAGATAACTTACATCAACGAATTGGATGACGAAGACGATGGTGACTCGACACATGCAACTACTAGTGGGGATGACATCACATACATTGAGCCCTCAAACGAATGGACTGAATGGCGTGATGCGCTTGCTTCCTCGATGTTCACGGAATGGCAATTGCCTAGTGAGGATGTTAGGGGAGAGAATGGTCGGTTGCAGTTTGACGACGACCGTCATCTAAAGTCGAATAAAGTTGTTGAAGAAGACGTTTCAGGCCATTGCGGAGATGAGGAGCCCAGCAGATAGTGGCTTTGGCTGGAACGATGACGTCAAGTGCATCATCGCTAAGAGGGACGTGTTCGATCATTGGGTCCGGACGCACCCTATAGCAGAAGGACTCCTAAACAAGCCATTTCTGCATTACGACGCACTGTCTTACGTGTTCGAAAAAGATCGAGCCACGAAGGCCCGTGTGAAGACCTTTGCAGACATCAGTTTAAACGTGTCGGCCAGCTACGATAGTGTCCCCACAGAGGATGGCCTCGACATGGAGTTCCCCGCTATGTGCAATCCGAGGATAAACATGTCCCCTAAGGACATAATGGGCGGTAGATCAGGCCGGTCGAGTGATGGTAGAACGGGCTCTAGCAGATAG

Coding sequence (CDS)

ATGGACAGACGTTGCTTCCTAATTTTGTGCCATCTACTACGAACTAGGGCCGATTTAGAATCTACTGAACACGTGGACGTTGAGGAGATGGTCGCCCTCTTTCTTCATGTGCTAGCACACGATGTGAAGAACCGACAGATCCAAAGGGAGTTCGTTAGGTCGAGCGAGATAGTCCCCCAACATTTCAACATGGTGTTGATGGCCGTTCTTCGACTACATGACGAGTTATTGGCCACACCACAACCTATAACGAGCGGATGCATAGACATGAGGTGGCATTGTTTCGAGAATTGCATTGGAGCACTTGACGACATGTACATCAAAGTTAACGTGTCAGCAGTGGATAGACCAAGGTATCGCACACGAAAGGGTGAAGTGGCGACAAATTTCCTCGGCGTATGCGATACGAAGGGGGATTTCGTTTTCATTTTAGCCGGTTGGGAAGGATCGGCCGCTAACTCACGTAATTTAAGAGATGCGCTTTCTCGACCTAACGGTCTAAAGGGCCAACGTTATCATCTACAAGAGTGGCGAGGTACCGGAAATGCTCCTGAGACACCGAAAGAGTTCTTTAACATGAAACATTCTAGCGCATGGAATGTCATTGAAAGAGCGTCCGGTCTGTTGAAGGGATGTTGGGCAATACTACGTGAAAAGTCCTACTACCCAGTTGAAGTCCAATGTCCGACTATCATGGCTTGTTGTCTCCTTCATAATTTAATAAATCGGGAGATAACTTACATCAACGAATTGGATGACGAAGACGATGGTGACTCGACACATGCAACTACTAGTGGGGATGACATCACATACATTGAGCCCTCAAACGAATGGACTGAATGGCGTGATGCGCTTGCTTCCTCGATGTTCACGGAATGGCAATTGCCTAGTGAGGATGTTAGGGGAGAGAATGGTCGGTTGCAGTTTGACGACGACCGTCATCTAAAGTCGAATAAAGTTGTTGAAGAAGACGTTTCAGGCCATTGCGGAGATGAGGAGCCCAGCAGATAG

Protein sequence

MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYRTRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLKGQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLPSEDVRGENGRLQFDDDRHLKSNKVVEEDVSGHCGDEEPSR
Homology
BLAST of MELO3C010063 vs. NCBI nr
Match: KAA0038275.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-171
Identity = 295/305 (96.72%), Postives = 297/305 (97.38%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ
Sbjct: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR
Sbjct: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGL-------KGQRYH 180
           TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGL       KGQRYH
Sbjct: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLKVLKVPYKGQRYH 180

Query: 181 LQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMA 240
           LQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMA
Sbjct: 181 LQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMA 240

Query: 241 CCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEW 299
           CCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEW
Sbjct: 241 CCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEW 300

BLAST of MELO3C010063 vs. NCBI nr
Match: XP_008444024.1 (PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo])

HSP 1 Score: 600.5 bits (1547), Expect = 8.8e-168
Identity = 289/298 (96.98%), Postives = 292/298 (97.99%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ
Sbjct: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR
Sbjct: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLKGQRYHLQEWRGT 180
           TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK     L+EWRGT
Sbjct: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK----VLKEWRGT 180

Query: 181 GNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNL 240
           GNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNL
Sbjct: 181 GNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNL 240

Query: 241 INREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLPSE 299
           INREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQL ++
Sbjct: 241 INREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLRNQ 294

BLAST of MELO3C010063 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 455.3 bits (1170), Expect = 4.6e-124
Identity = 226/322 (70.19%), Postives = 251/322 (77.95%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCF ILCHLLRT A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+RS E + +
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVL+AV+RLHDELL  PQP+ + C D RW  FENC+GALD  YIKVNV A DR RYR
Sbjct: 127 HFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK------------ 180
           TRKGEVATN LGVCDTKGDFV++LAGWEGSAA+SR LRDALSRPN LK            
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAG 246

Query: 181 ------------GQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAIL 240
                       GQRYHLQEWRG  NAP T KEFFNMKHSSA NVIERA G+LKG WAIL
Sbjct: 247 YPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL 306

Query: 241 REKSYYPVEVQCPTIMACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSN 299
           R KSYYPVEVQC TI+ACCLLHNLINRE+T  +  D+ D+ DSTHATT+ DDI YIE SN
Sbjct: 307 RGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN 366

BLAST of MELO3C010063 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 453.8 bits (1166), Expect = 1.3e-123
Identity = 225/322 (69.88%), Postives = 251/322 (77.95%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCF ILCHLLRT A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+RS E + +
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVL+AV+RLH+ELL  PQP+ + C D RW  FENC+GALD  YIKVNV A DR RYR
Sbjct: 127 HFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK------------ 180
           TRKGEVATN LGVCDTKGDFV++LAGWEGSAA+SR LRDALSRPN LK            
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAG 246

Query: 181 ------------GQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAIL 240
                       GQRYHLQEWRG  NAP T KEFFNMKHSSA NVIERA G+LKG WAIL
Sbjct: 247 YPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL 306

Query: 241 REKSYYPVEVQCPTIMACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSN 299
           R KSYYPVEVQC TI+ACCLLHNLINRE+T  +  D+ D+ DSTHATT+ DDI YIE SN
Sbjct: 307 RGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN 366

BLAST of MELO3C010063 vs. NCBI nr
Match: KAA0065286.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 452.6 bits (1163), Expect = 3.0e-123
Identity = 224/322 (69.57%), Postives = 250/322 (77.64%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCF ILCHLLRT A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+RS E + +
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVL+AV+RLH+ELL  PQP+ + C D RW CFENC+GALD  YIKVNV A DR RYR
Sbjct: 127 HFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK------------ 180
           TRKGEVATN LGVCDTKGDFV++LAGWEGSAA+SR LRDALSR N LK            
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRLNRLKVPKGYYYLVDAG 246

Query: 181 ------------GQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAIL 240
                       GQ YHLQEWRG  NAP T KEFFNMKHSSA NVIERA G+LKG WAIL
Sbjct: 247 YPNAEGFLAPYRGQHYHLQEWRGPENAPSTSKEFFNMKHSSACNVIERAFGVLKGRWAIL 306

Query: 241 REKSYYPVEVQCPTIMACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSN 299
           R KSYYPVEVQC TI+ACCLLHNLINRE+T  +  D+ D+ DSTHATT+ DDI YIE SN
Sbjct: 307 RGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN 366

BLAST of MELO3C010063 vs. ExPASy TrEMBL
Match: A0A5A7TA66 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001310 PE=3 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 6.4e-172
Identity = 295/305 (96.72%), Postives = 297/305 (97.38%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ
Sbjct: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR
Sbjct: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGL-------KGQRYH 180
           TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGL       KGQRYH
Sbjct: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLKVLKVPYKGQRYH 180

Query: 181 LQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMA 240
           LQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMA
Sbjct: 181 LQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMA 240

Query: 241 CCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEW 299
           CCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEW
Sbjct: 241 CCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEW 300

BLAST of MELO3C010063 vs. ExPASy TrEMBL
Match: A0A1S3B9E4 (uncharacterized protein LOC103487473 OS=Cucumis melo OX=3656 GN=LOC103487473 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.3e-168
Identity = 289/298 (96.98%), Postives = 292/298 (97.99%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ
Sbjct: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR
Sbjct: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLKGQRYHLQEWRGT 180
           TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK     L+EWRGT
Sbjct: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK----VLKEWRGT 180

Query: 181 GNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNL 240
           GNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNL
Sbjct: 181 GNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNL 240

Query: 241 INREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLPSE 299
           INREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQL ++
Sbjct: 241 INREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLRNQ 294

BLAST of MELO3C010063 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.2e-124
Identity = 226/322 (70.19%), Postives = 251/322 (77.95%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCF ILCHLLRT A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+RS E + +
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVL+AV+RLHDELL  PQP+ + C D RW  FENC+GALD  YIKVNV A DR RYR
Sbjct: 127 HFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK------------ 180
           TRKGEVATN LGVCDTKGDFV++LAGWEGSAA+SR LRDALSRPN LK            
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAG 246

Query: 181 ------------GQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAIL 240
                       GQRYHLQEWRG  NAP T KEFFNMKHSSA NVIERA G+LKG WAIL
Sbjct: 247 YPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL 306

Query: 241 REKSYYPVEVQCPTIMACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSN 299
           R KSYYPVEVQC TI+ACCLLHNLINRE+T  +  D+ D+ DSTHATT+ DDI YIE SN
Sbjct: 307 RGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN 366

BLAST of MELO3C010063 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 6.5e-124
Identity = 225/322 (69.88%), Postives = 251/322 (77.95%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCF ILCHLLRT A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+RS E + +
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVL+AV+RLH+ELL  PQP+ + C D RW  FENC+GALD  YIKVNV A DR RYR
Sbjct: 127 HFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK------------ 180
           TRKGEVATN LGVCDTKGDFV++LAGWEGSAA+SR LRDALSRPN LK            
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAG 246

Query: 181 ------------GQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAIL 240
                       GQRYHLQEWRG  NAP T KEFFNMKHSSA NVIERA G+LKG WAIL
Sbjct: 247 YPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL 306

Query: 241 REKSYYPVEVQCPTIMACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSN 299
           R KSYYPVEVQC TI+ACCLLHNLINRE+T  +  D+ D+ DSTHATT+ DDI YIE SN
Sbjct: 307 RGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN 366

BLAST of MELO3C010063 vs. ExPASy TrEMBL
Match: A0A5A7VG29 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3818G00010 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123
Identity = 224/322 (69.57%), Postives = 250/322 (77.64%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MDRRCF ILCHLLRT A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+RS E + +
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
           HFNMVL+AV+RLH+ELL  PQP+ + C D RW CFENC+GALD  YIKVNV A DR RYR
Sbjct: 127 HFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLK------------ 180
           TRKGEVATN LGVCDTKGDFV++LAGWEGSAA+SR LRDALSR N LK            
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRLNRLKVPKGYYYLVDAG 246

Query: 181 ------------GQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIERASGLLKGCWAIL 240
                       GQ YHLQEWRG  NAP T KEFFNMKHSSA NVIERA G+LKG WAIL
Sbjct: 247 YPNAEGFLAPYRGQHYHLQEWRGPENAPSTSKEFFNMKHSSACNVIERAFGVLKGRWAIL 306

Query: 241 REKSYYPVEVQCPTIMACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSN 299
           R KSYYPVEVQC TI+ACCLLHNLINRE+T  +  D+ D+ DSTHATT+ DDI YIE SN
Sbjct: 307 RGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN 366

BLAST of MELO3C010063 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-32
Identity = 83/260 (31.92%), Postives = 129/260 (49.62%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           MD+  F  LC LL+TR  L  T  + +E  +A+FL ++ H+++ R +Q  F  S E + +
Sbjct: 48  MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISR 107

Query: 61  HFNMVLMAVLRLHDELLATPQP-ITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRY 120
           HFN VL AV+ +  +     QP   S  ++     F++C+G +D  +I V V   ++  +
Sbjct: 108 HFNNVLNAVIAISKDFF---QPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQGPF 167

Query: 121 RTRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGL---KGQRY---- 180
           R   G +  N L        F ++LAGWEGSA++ + L  AL+R N L   +G+ Y    
Sbjct: 168 RNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDN 227

Query: 181 -------HLQEWRGTG-NAPETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPV 240
                   +  + G   N+ E  KE FN +H      I R  G LK  + IL     YP+
Sbjct: 228 KYPNLPGFIAPYHGVSTNSREEAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPL 287

Query: 241 EVQCPTIMACCLLHNLINRE 245
           + Q   ++A C LHN +  E
Sbjct: 288 QTQVKLVIAACALHNYVRLE 304

BLAST of MELO3C010063 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-18
Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = 0

Query: 140 FVFILAGWEGSAANSRNLRDAL-----------SRPNGL---KGQRYHLQEWRGTGNAPE 199
           F+++L+GWEGSA +SR L DAL           +R N L   +G RYHLQE+ G    PE
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRKFYLVDCGFANRLNFLAPFRGVRYHLQEFAGQRRDPE 84

Query: 200 TPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYYPVEVQCPTIMACCLLHNLINREI 259
           TP E FN++H S  NVIER  G+ K  +AI +    +  + Q   ++ C  LHN + +E 
Sbjct: 85  TPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFLRKEC 144

Query: 260 TYIN-ELDDEDDGDSTHATTSGDDITYIEPSNE------------WTEWRDALASSMFTE 293
                +  DE   +       G+ +   E  NE               WR ++A  M+ +
Sbjct: 145 RSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWRKSMAEDMWKD 204

BLAST of MELO3C010063 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-17
Identity = 66/247 (26.72%), Postives = 101/247 (40.89%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           M   CF  LC++L+T  DL+ T ++ +EE VA+FL +  H+   R +   F R+ E V +
Sbjct: 72  MSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQR 131

Query: 61  HFNMVLMAVLRLHDELLATPQ-------PITSGCIDMRWHCFENCIGALDDMYIKVNVSA 120
            F  VL A   L  + + TP        P         W  F   +GA+D  ++ V V  
Sbjct: 132 KFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKP 191

Query: 121 VDRPRYRTRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALS----------- 180
             +  Y  R    + N + +CD K  F +I  G  GS  ++  L+ A             
Sbjct: 192 DLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSE 251

Query: 181 -------------------RPNGLKGQRYHLQEWRGTGNAPETPKEFFNMKHSSAWNVIE 211
                              R +  +  RYH+ ++   G  P    E FN  H+S  +VIE
Sbjct: 252 KYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFY-YGPRPRNKHELFNQCHTSLRSVIE 311

BLAST of MELO3C010063 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 5.4e-14
Identity = 31/69 (44.93%), Postives = 49/69 (71.01%), Query Frame = 0

Query: 95  FENCIGALDDMYIKVNVSAVDRPRYRTRKGEVATNFLGVCDTKGDFVFILAGWEGSAANS 154
           F++C+GA+DD +I   VS    P +R RKG+++ N L  C+   +F+++L+GWEGSA +S
Sbjct: 22  FKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDS 81

Query: 155 RNLRDALSR 164
           + L DAL+R
Sbjct: 82  KVLNDALTR 90

BLAST of MELO3C010063 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 9.2e-06
Identity = 41/162 (25.31%), Postives = 66/162 (40.74%), Query Frame = 0

Query: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60
           M    F  LC +L  +  L+S+ ++ ++E VA+FL + A +   R I   F  + E + +
Sbjct: 30  MSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQETIWR 89

Query: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120
            F+ VL A+ RL  E +   +      I  R          L D+               
Sbjct: 90  KFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLL-------------- 149

Query: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALS 163
              G  + N L +CD    F +   G  GS  ++R L  A+S
Sbjct: 150 ---GIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAIS 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0038275.11.3e-17196.72retrotransposon protein [Cucumis melo var. makuwa][more]
XP_008444024.18.8e-16896.98PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo][more]
KAA0046727.14.6e-12470.19retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon... [more]
KAA0035620.11.3e-12369.88retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon... [more]
KAA0065286.13.0e-12369.57retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TA666.4e-17296.72Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3B9E44.3e-16896.98uncharacterized protein LOC103487473 OS=Cucumis melo OX=3656 GN=LOC103487473 PE=... [more]
A0A5A7TXW12.2e-12470.19Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BDX06.5e-12469.88Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VG291.4e-12369.57Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
AT5G41980.17.5e-3231.92CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G35695.11.6e-1832.78CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.12.3e-1726.72unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G28950.15.4e-1444.93unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G28730.19.2e-0625.31unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 115..239
e-value: 2.9E-10
score: 40.0
NoneNo IPR availablePANTHERPTHR22930:SF201NUCLEASE HARBI1-LIKE PROTEINcoord: 1..303
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 1..303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010063.1MELO3C010063.1mRNA