MELO3C010040 (gene) Melon (DHL92) v4

Overview


Name	MELO3C010040
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ZnMc domain-containing protein
Location	chr02: 12232199 .. 12233405 (+)
RNA-Seq Expression	MELO3C010040
Synteny	MELO3C010040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCCATCAACCAAATATATATCAAAATCTTCTATGGCAAATAAACCTTTGGTAATTCTTCTCTTCATCTCCATCTTCCTTCCACTGTGCTTTTCAACTCCATTGCTCCATGTTTCTCCATTTGCATTTCTCAACAAACTCCAAGGATGCACGAAAGGTGATAATGTCAAAGGCATATCCAATCTTAAGAACTTTTTCCATCATTACGGTTATTTAAACCATCAAATCAATGCCACTAGTCATTTGATTGACATTAACGTTGATGACACCTTTGACGATCGTCTCGAGTCTGCTATCAAAACCTACCAACAATACTTCCATCTAAACTCCACTGGATCCCTGAATGTCGAGACGATATCCCAACTTGCAAAACCTCGGTGTGGTAATCCAGATATCATCGACGAAACTGCCGATCGAATGTTATTAGAACACAACAGTGATAGTAGACATGATTACCATCATCTTCCCCACATCGTTTCACACTTCACTTTCTTCTCAGGAATGCGTAGGTGGCCATCTACCAAATACCACCTAACATACGCATTTCTTCCAGGCACTCGAGTGGATGTGAAAGCCCCAGTGGCACGAGCATTTGCAACTTGGGCTCGATACACTCATTTTTAGTTTTCTTTGGCTAAAAACTATAGAAAAGCTAATTTAAAGATAGGGTTTTATAGAGGGAACCATGGAGATGGGTATTCATTTGATGGGCCAGGGAGGACTTTGGCACATTCTTTTGCTCCAACTGATGGGAGATTTCATTATGATTCAGCAGAAAAATGGACAGTTGGGGCAGTGAGAGGTAGATATGATATGCAAACAGTGGCTTTGCATGAGATTGGACATCTTCTTGGGCTAGGGCATAGCAAAATTAGAAATAGTATAATGTATCCTTATATAAAATCTGGGGCTACTAAGGGTTTGAGTCTTGACGACATTTTAGGAATCAAGGTTTTATACCATAGACCCTAGCCTAATTCACAAAGTCTCGTCAACAAAAGTTTTATAGTGTATTGTTTTAAATAATAATAGTAATACTTGAGTGCAACTTAGACTACTGTATCTATGAAATTGAAAAAGTTCACCATGTGACAACTTGTGATTGGTCAATAAGGTGAATTGCATAAAGATAGGTGAAGCCTGAGACGTATGTAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAGTATGTACATGTGGAAGT

mRNA sequence

AAATCCATCAACCAAATATATATCAAAATCTTCTATGGCAAATAAACCTTTGGTAATTCTTCTCTTCATCTCCATCTTCCTTCCACTGTGCTTTTCAACTCCATTGCTCCATGTTTCTCCATTTGCATTTCTCAACAAACTCCAAGGATGCACGAAAGGTGATAATGTCAAAGGCATATCCAATCTTAAGAACTTTTTCCATCATTACGGTTATTTAAACCATCAAATCAATGCCACTAGTCATTTGATTGACATTAACGTTGATGACACCTTTGACGATCGTCTCGAGTCTGCTATCAAAACCTACCAACAATACTTCCATCTAAACTCCACTGGATCCCTGAATGTCGAGACGATATCCCAACTTGCAAAACCTCGGTGTGGTAATCCAGATATCATCGACGAAACTGCCGATCGAATGTTATTAGAACACAACAGTGATAGTAGACATGATTACCATCATCTTCCCCACATCGTTTCACACTTCACTTTCTTCTCAGGAATGCGTAGGTGGCCATCTACCAAATACCACCTAACATACGCATTTCTTCCAGGCACTCGAGTGGATGTGAAAGCCCCAGTGGCACGAGCATTTGCAACTTGGGCTCGATACACTCATTTTTAGTTTTCTTTGGCTAAAAACTATAGAAAAGCTAATTTAAAGATAGGGTTTTATAGAGGGAACCATGGAGATGGGTATTCATTTGATGGGCCAGGGAGGACTTTGGCACATTCTTTTGCTCCAACTGATGGGAGATTTCATTATGATTCAGCAGAAAAATGGACAGTTGGGGCAGTGAGAGGTAGATATGATATGCAAACAGTGGCTTTGCATGAGATTGGACATCTTCTTGGGCTAGGGCATAGCAAAATTAGAAATAGTATAATGTATCCTTATATAAAATCTGGGGCTACTAAGGGTTTGAGTCTTGACGACATTTTAGGAATCAAGGTTTTATACCATAGACCCTAGCCTAATTCACAAAGTCTCGTCAACAAAAGTTTTATAGTGTATTGTTTTAAATAATAATAGTAATACTTGAGTGCAACTTAGACTACTGTATCTATGAAATTGAAAAAGTTCACCATGTGACAACTTGTGATTGGTCAATAAGGTGAATTGCATAAAGATAGGTGAAGCCTGAGACGTATGTAAAGTTTTTTTGTTAGTATGTACATGTGGAAGT

Coding sequence (CDS)

ATGGCAAATAAACCTTTGGTAATTCTTCTCTTCATCTCCATCTTCCTTCCACTGTGCTTTTCAACTCCATTGCTCCATGTTTCTCCATTTGCATTTCTCAACAAACTCCAAGGATGCACGAAAGGTGATAATGTCAAAGGCATATCCAATCTTAAGAACTTTTTCCATCATTACGGTTATTTAAACCATCAAATCAATGCCACTAGTCATTTGATTGACATTAACGTTGATGACACCTTTGACGATCGTCTCGAGTCTGCTATCAAAACCTACCAACAATACTTCCATCTAAACTCCACTGGATCCCTGAATGTCGAGACGATATCCCAACTTGCAAAACCTCGGTGTGGTAATCCAGATATCATCGACGAAACTGCCGATCGAATGTTATTAGAACACAACAGTGATAGTAGACATGATTACCATCATCTTCCCCACATCGTTTCACACTTCACTTTCTTCTCAGGAATGCGTAGGTGGCCATCTACCAAATACCACCTAACATACGCATTTCTTCCAGGCACTCGAGTGGATGTGAAAGCCCCAGTGGCACGAGCATTTGCAACTTGGGCTCGATACACTCATTTTTAG

Protein sequence

MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPDIIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVKAPVARAFATWARYTHF

Homology

[Close]

BLAST of MELO3C010040 vs. NCBI nr
Match: XP_016899789.1 (PREDICTED: LOW QUALITY PROTEIN: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 407.5 bits (1046), Expect = 6.4e-110
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY
Sbjct: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD
Sbjct: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120

Query: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180
           IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK
Sbjct: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180

Query: 181 APVARAFATWARYTHF 197
           APVARAFATWARYTHF
Sbjct: 181 APVARAFATWARYTHF 196

[Close]

BLAST of MELO3C010040 vs. NCBI nr
Match: TYK30629.1 (metalloendoproteinase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 405.6 bits (1041), Expect = 2.4e-109
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY
Sbjct: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINATSHLIDI+VDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD
Sbjct: 61  LNHQINATSHLIDIDVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120

Query: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180
           IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK
Sbjct: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180

Query: 181 APVARAFATWARYTHF 197
           APVARAFATWARYTHF
Sbjct: 181 APVARAFATWARYTHF 196

[Close]

BLAST of MELO3C010040 vs. NCBI nr
Match: KAA0038234.1 (metalloendoproteinase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108
Identity = 193/196 (98.47%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY
Sbjct: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINATSHLIDI+VDDTFDDRLESAIKTYQQYFHLNSTGSLNV+TISQLAKPRCGNPD
Sbjct: 61  LNHQINATSHLIDIDVDDTFDDRLESAIKTYQQYFHLNSTGSLNVDTISQLAKPRCGNPD 120

Query: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180
           IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPS+KYHLTYAFLPGTRVDVK
Sbjct: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSSKYHLTYAFLPGTRVDVK 180

Query: 181 APVARAFATWARYTHF 197
           APVARAFATWARYTHF
Sbjct: 181 APVARAFATWARYTHF 196

[Close]

BLAST of MELO3C010040 vs. NCBI nr
Match: XP_008443669.1 (PREDICTED: metalloendoproteinase 2-MMP-like [Cucumis melo] >KAA0038230.1 metalloendoproteinase 2-MMP-like [Cucumis melo var. makuwa] >TYK30625.1 metalloendoproteinase 2-MMP-like [Cucumis melo var. makuwa])

HSP 1 Score: 327.8 bits (839), Expect = 6.4e-86
Identity = 159/197 (80.71%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           M NK L ILLFIS+FLPLCFS PLL VSPFAFLN LQGC KGDNVKGIS LKNFF +YGY
Sbjct: 1   MGNKTLAILLFISVFLPLCFSLPLLQVSPFAFLNDLQGCKKGDNVKGISKLKNFFRYYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINAT HLID + DDTFDDRLE AIKTYQQYFHLN TGSLN ETISQLA PRCGNPD
Sbjct: 61  LNHQINATGHLIDTDADDTFDDRLEFAIKTYQQYFHLNPTGSLNAETISQLATPRCGNPD 120

Query: 121 IIDETADRMLLEH-NSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDV 180
           II+E+  RML EH N+DS HD+HHLPH VSH+ FF G RRWPSTKY LTYAFLPGTR D 
Sbjct: 121 IINESTGRMLSEHNNNDSSHDHHHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTRADA 180

Query: 181 KAPVARAFATWARYTHF 197
           KAPV RAFATWAR THF
Sbjct: 181 KAPVTRAFATWARNTHF 197

[Close]

BLAST of MELO3C010040 vs. NCBI nr
Match: XP_038880397.1 (metalloendoproteinase 1-like [Benincasa hispida])

HSP 1 Score: 315.5 bits (807), Expect = 3.3e-82
Identity = 157/200 (78.50%), Postives = 168/200 (84.00%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           MANKPLVILLFISIFLPLCFS PLL VSPFAFLN LQGC KGD+V GIS LKNFFH+YGY
Sbjct: 1   MANKPLVILLFISIFLPLCFSLPLLQVSPFAFLNDLQGCKKGDHVNGISKLKNFFHYYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNH+IN T HLI+ + DDTFDD LESAIKTYQQYFHLN TG L+VETISQLA PRCG PD
Sbjct: 61  LNHRINVTGHLIEADFDDTFDDFLESAIKTYQQYFHLNPTGLLDVETISQLATPRCGVPD 120

Query: 121 IIDETADRMLLEH--NSDSRHD--YHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTR 180
           II+ T  RML EH  ++DS HD  +HHLPH VSH+ FF G RRWPSTKY LTYAFLPGTR
Sbjct: 121 IINGTTSRMLSEHDNDNDSEHDHHHHHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTR 180

Query: 181 VDVKAPVARAFATWARYTHF 197
            D KAPVARAFATWAR THF
Sbjct: 181 ADAKAPVARAFATWARNTHF 200

[Close]

BLAST of MELO3C010040 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 77/203 (37.93%), Postives = 101/203 (49.75%), Query Frame = 0


Query: 6   LVILLFISIFLPLC--FSTPLLHVSPFAFLN----------KLQGCTKGDNVKGISNLKN 65
           L IL+F     P+   F T +  + P  FLN          KL GC  G+N+ G+S LK 
Sbjct: 6   LTILIFFFTVNPISAKFYTNVSSIPPLQFLNATQNAWETFSKLAGCHIGENINGLSKLKQ 65

Query: 66  FFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAK 125
           +F  +GY+    N T         D FDD L+SAI TYQ+ F+L  TG L+  T+ Q+ K
Sbjct: 66  YFRRFGYITTTGNCT---------DDFDDVLQSAINTYQKNFNLKVTGKLDSSTLRQIVK 125

Query: 126 PRCGNPDIIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLP 185
           PRCGNPD+ID  +     E N         +      ++FF G  RWP  K  LTYAF P
Sbjct: 126 PRCGNPDLIDGVS-----EMNGGK------ILRTTEKYSFFPGKPRWPKRKRDLTYAFAP 185

Query: 186 GTRV--DVKAPVARAFATWARYT 195
              +  +VK   +RAF  WA  T
Sbjct: 186 QNNLTDEVKRVFSRAFTRWAEVT 188

[Close]

BLAST of MELO3C010040 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 7.3e-24
Identity = 65/151 (43.05%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 42  GDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTG 101
           G N KG+SN+KN+FHH GY+    NA       + DD FDD L SAIKTYQ+ ++LN TG
Sbjct: 48  GQNYKGLSNVKNYFHHLGYIP---NAP------HFDDNFDDTLVSAIKTYQKNYNLNVTG 107

Query: 102 SLNVETISQLAKPRCGNPDIIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWP 161
             ++ T+ Q+  PRCG PDII  T        N  +         ++S +TFF  M RW 
Sbjct: 108 KFDINTLKQIMTPRCGVPDIIINT--------NKTTSFG------MISDYTFFKDMPRWQ 167

Query: 162 STKYHLTYAFLPGTRVD--VKAPVARAFATW 191
           +    LTYAF P  R+D   K+ +ARAF+ W
Sbjct: 168 AGTTQLTYAFSPEPRLDDTFKSAIARAFSKW 175

[Close]

BLAST of MELO3C010040 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 63/171 (36.84%), Postives = 87/171 (50.88%), Query Frame = 0


Query: 31  AFLNKLQGCTKGDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKT 90
           AF N   GC  G NV G+  +K +F  +GY+    +        N  D FDD L++A++ 
Sbjct: 43  AFSN-FTGCHHGQNVDGLYRIKKYFQRFGYIPETFSG-------NFTDDFDDILKAAVEL 102

Query: 91  YQQYFHLNSTGSLNVETISQLAKPRCGNPDIIDETA-----DRMLLEHNSDSRHDYHHLP 150
           YQ  F+LN TG L+  TI  +  PRCGNPD+++ T+      R   E N    H      
Sbjct: 103 YQTNFNLNVTGELDALTIQHIVIPRCGNPDVVNGTSLMHGGRRKTFEVNFSRTH-----L 162

Query: 151 HIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRV--DVKAPVARAFATWARYT 195
           H V  +T F G  RWP  +  LTYAF P   +  +VK+  +RAF  W+  T
Sbjct: 163 HAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVT 200

[Close]

BLAST of MELO3C010040 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-21
Identity = 63/170 (37.06%), Postives = 89/170 (52.35%), Query Frame = 0


Query: 31  AFLNKLQGCTKGDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKT 90
           +FLN   GC  G    G+  LK +F H+GY+      T   +  N  D FDD L++A++ 
Sbjct: 45  SFLN-FTGCHAGKKYDGLYMLKQYFQHFGYI------TETNLSGNFTDDFDDILKNAVEM 104

Query: 91  YQQYFHLNSTGSLNVETISQLAKPRCGNPDIIDET----ADRMLLEHNSDSRHDYHHLPH 150
           YQ+ F LN TG L+  T+  +  PRCGNPD+++ T    + R   E +   R       H
Sbjct: 105 YQRNFQLNVTGVLDELTLKHVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQRF---H 164

Query: 151 IVSHFTFFSGMRRWPSTKYHLTYAFLPGTRV--DVKAPVARAFATWARYT 195
            V H++FF G  RWP  +  LTYAF P   +  +VK+  +RAF  W   T
Sbjct: 165 AVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVT 204

[Close]

BLAST of MELO3C010040 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.4e-13
Identity = 56/179 (31.28%), Postives = 83/179 (46.37%), Query Frame = 0


Query: 21  STPLLHVSPFAF--LNKLQGCTKGDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDD 80
           +T ++HVS   +   ++L     G +V G+S LK + H +GY+N      S        D
Sbjct: 41  ATQIIHVSNSTWHDFSRLVDVQIGSHVSGVSELKRYLHRFGYVNDGSEIFS--------D 100

Query: 81  TFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPDIIDETADRMLLEHNSDSR 140
            FD  LESAI  YQ+   L  TG L+  T++ ++ PRCG  D          +  N+D  
Sbjct: 101 VFDGPLESAISLYQENLGLPITGRLDTSTVTLMSLPRCGVSD--------THMTINND-- 160

Query: 141 HDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPG------TRVDVKAPVARAFATWA 192
                  H  +H+T+F+G  +W   +  LTYA          T  DVK    RAF+ W+
Sbjct: 161 -----FLHTTAHYTYFNGKPKW--NRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWS 194

[Close]

BLAST of MELO3C010040 vs. ExPASy TrEMBL
Match: A0A1S4DUX9 (LOW QUALITY PROTEIN: metalloendoproteinase 1-like OS=Cucumis melo OX=3656 GN=LOC103487472 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.1e-110
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY
Sbjct: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD
Sbjct: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120

Query: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180
           IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK
Sbjct: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180

Query: 181 APVARAFATWARYTHF 197
           APVARAFATWARYTHF
Sbjct: 181 APVARAFATWARYTHF 196

[Close]

BLAST of MELO3C010040 vs. ExPASy TrEMBL
Match: A0A5D3E491 (Metalloendoproteinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00480 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY
Sbjct: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINATSHLIDI+VDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD
Sbjct: 61  LNHQINATSHLIDIDVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120

Query: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180
           IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK
Sbjct: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180

Query: 181 APVARAFATWARYTHF 197
           APVARAFATWARYTHF
Sbjct: 181 APVARAFATWARYTHF 196

[Close]

BLAST of MELO3C010040 vs. ExPASy TrEMBL
Match: A0A5A7T439 (Metalloendoproteinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00770 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 7.6e-109
Identity = 193/196 (98.47%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY
Sbjct: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINATSHLIDI+VDDTFDDRLESAIKTYQQYFHLNSTGSLNV+TISQLAKPRCGNPD
Sbjct: 61  LNHQINATSHLIDIDVDDTFDDRLESAIKTYQQYFHLNSTGSLNVDTISQLAKPRCGNPD 120

Query: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDVK 180
           IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPS+KYHLTYAFLPGTRVDVK
Sbjct: 121 IIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSSKYHLTYAFLPGTRVDVK 180

Query: 181 APVARAFATWARYTHF 197
           APVARAFATWARYTHF
Sbjct: 181 APVARAFATWARYTHF 196

[Close]

BLAST of MELO3C010040 vs. ExPASy TrEMBL
Match: A0A5A7T4D6 (Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00410 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.1e-86
Identity = 159/197 (80.71%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           M NK L ILLFIS+FLPLCFS PLL VSPFAFLN LQGC KGDNVKGIS LKNFF +YGY
Sbjct: 1   MGNKTLAILLFISVFLPLCFSLPLLQVSPFAFLNDLQGCKKGDNVKGISKLKNFFRYYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINAT HLID + DDTFDDRLE AIKTYQQYFHLN TGSLN ETISQLA PRCGNPD
Sbjct: 61  LNHQINATGHLIDTDADDTFDDRLEFAIKTYQQYFHLNPTGSLNAETISQLATPRCGNPD 120

Query: 121 IIDETADRMLLEH-NSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDV 180
           II+E+  RML EH N+DS HD+HHLPH VSH+ FF G RRWPSTKY LTYAFLPGTR D 
Sbjct: 121 IINESTGRMLSEHNNNDSSHDHHHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTRADA 180

Query: 181 KAPVARAFATWARYTHF 197
           KAPV RAFATWAR THF
Sbjct: 181 KAPVTRAFATWARNTHF 197

[Close]

BLAST of MELO3C010040 vs. ExPASy TrEMBL
Match: A0A1S3B8J8 (metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103487215 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.1e-86
Identity = 159/197 (80.71%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MANKPLVILLFISIFLPLCFSTPLLHVSPFAFLNKLQGCTKGDNVKGISNLKNFFHHYGY 60
           M NK L ILLFIS+FLPLCFS PLL VSPFAFLN LQGC KGDNVKGIS LKNFF +YGY
Sbjct: 1   MGNKTLAILLFISVFLPLCFSLPLLQVSPFAFLNDLQGCKKGDNVKGISKLKNFFRYYGY 60

Query: 61  LNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPD 120
           LNHQINAT HLID + DDTFDDRLE AIKTYQQYFHLN TGSLN ETISQLA PRCGNPD
Sbjct: 61  LNHQINATGHLIDTDADDTFDDRLEFAIKTYQQYFHLNPTGSLNAETISQLATPRCGNPD 120

Query: 121 IIDETADRMLLEH-NSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRVDV 180
           II+E+  RML EH N+DS HD+HHLPH VSH+ FF G RRWPSTKY LTYAFLPGTR D 
Sbjct: 121 IINESTGRMLSEHNNNDSSHDHHHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTRADA 180

Query: 181 KAPVARAFATWARYTHF 197
           KAPV RAFATWAR THF
Sbjct: 181 KAPVTRAFATWARNTHF 197

[Close]

BLAST of MELO3C010040 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 117.9 bits (294), Expect = 9.4e-27
Identity = 77/203 (37.93%), Postives = 101/203 (49.75%), Query Frame = 0


Query: 6   LVILLFISIFLPLC--FSTPLLHVSPFAFLN----------KLQGCTKGDNVKGISNLKN 65
           L IL+F     P+   F T +  + P  FLN          KL GC  G+N+ G+S LK 
Sbjct: 6   LTILIFFFTVNPISAKFYTNVSSIPPLQFLNATQNAWETFSKLAGCHIGENINGLSKLKQ 65

Query: 66  FFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAK 125
           +F  +GY+    N T         D FDD L+SAI TYQ+ F+L  TG L+  T+ Q+ K
Sbjct: 66  YFRRFGYITTTGNCT---------DDFDDVLQSAINTYQKNFNLKVTGKLDSSTLRQIVK 125

Query: 126 PRCGNPDIIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLP 185
           PRCGNPD+ID  +     E N         +      ++FF G  RWP  K  LTYAF P
Sbjct: 126 PRCGNPDLIDGVS-----EMNGGK------ILRTTEKYSFFPGKPRWPKRKRDLTYAFAP 185

Query: 186 GTRV--DVKAPVARAFATWARYT 195
              +  +VK   +RAF  WA  T
Sbjct: 186 QNNLTDEVKRVFSRAFTRWAEVT 188

[Close]

BLAST of MELO3C010040 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 104.8 bits (260), Expect = 8.3e-23
Identity = 63/171 (36.84%), Postives = 87/171 (50.88%), Query Frame = 0


Query: 31  AFLNKLQGCTKGDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKT 90
           AF N   GC  G NV G+  +K +F  +GY+    +        N  D FDD L++A++ 
Sbjct: 43  AFSN-FTGCHHGQNVDGLYRIKKYFQRFGYIPETFSG-------NFTDDFDDILKAAVEL 102

Query: 91  YQQYFHLNSTGSLNVETISQLAKPRCGNPDIIDETA-----DRMLLEHNSDSRHDYHHLP 150
           YQ  F+LN TG L+  TI  +  PRCGNPD+++ T+      R   E N    H      
Sbjct: 103 YQTNFNLNVTGELDALTIQHIVIPRCGNPDVVNGTSLMHGGRRKTFEVNFSRTH-----L 162

Query: 151 HIVSHFTFFSGMRRWPSTKYHLTYAFLPGTRV--DVKAPVARAFATWARYT 195
           H V  +T F G  RWP  +  LTYAF P   +  +VK+  +RAF  W+  T
Sbjct: 163 HAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVT 200

[Close]

BLAST of MELO3C010040 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22
Identity = 63/170 (37.06%), Postives = 89/170 (52.35%), Query Frame = 0


Query: 31  AFLNKLQGCTKGDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKT 90
           +FLN   GC  G    G+  LK +F H+GY+      T   +  N  D FDD L++A++ 
Sbjct: 45  SFLN-FTGCHAGKKYDGLYMLKQYFQHFGYI------TETNLSGNFTDDFDDILKNAVEM 104

Query: 91  YQQYFHLNSTGSLNVETISQLAKPRCGNPDIIDET----ADRMLLEHNSDSRHDYHHLPH 150
           YQ+ F LN TG L+  T+  +  PRCGNPD+++ T    + R   E +   R       H
Sbjct: 105 YQRNFQLNVTGVLDELTLKHVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQRF---H 164

Query: 151 IVSHFTFFSGMRRWPSTKYHLTYAFLPGTRV--DVKAPVARAFATWARYT 195
            V H++FF G  RWP  +  LTYAF P   +  +VK+  +RAF  W   T
Sbjct: 165 AVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVT 204

[Close]

BLAST of MELO3C010040 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-14
Identity = 56/179 (31.28%), Postives = 83/179 (46.37%), Query Frame = 0


Query: 21  STPLLHVSPFAF--LNKLQGCTKGDNVKGISNLKNFFHHYGYLNHQINATSHLIDINVDD 80
           +T ++HVS   +   ++L     G +V G+S LK + H +GY+N      S        D
Sbjct: 41  ATQIIHVSNSTWHDFSRLVDVQIGSHVSGVSELKRYLHRFGYVNDGSEIFS--------D 100

Query: 81  TFDDRLESAIKTYQQYFHLNSTGSLNVETISQLAKPRCGNPDIIDETADRMLLEHNSDSR 140
            FD  LESAI  YQ+   L  TG L+  T++ ++ PRCG  D          +  N+D  
Sbjct: 101 VFDGPLESAISLYQENLGLPITGRLDTSTVTLMSLPRCGVSD--------THMTINND-- 160

Query: 141 HDYHHLPHIVSHFTFFSGMRRWPSTKYHLTYAFLPG------TRVDVKAPVARAFATWA 192
                  H  +H+T+F+G  +W   +  LTYA          T  DVK    RAF+ W+
Sbjct: 161 -----FLHTTAHYTYFNGKPKW--NRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWS 194

[Close]

BLAST of MELO3C010040 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 45.4 bits (106), Expect = 5.9e-05
Identity = 39/151 (25.83%), Postives = 54/151 (35.76%), Query Frame = 0


Query: 48  ISNLKNFFHHYGYLNHQINATSHLIDINVDDTFDDRLESAIKTYQQYFHLNSTGSLNVET 107
           I  +K     YGYL                ++ D   E A+  YQ+   L  TG  + +T
Sbjct: 50  IPEIKRHLQQYGYLPQN------------KESDDVSFEQALVRYQKNLGLPITGKPDSDT 109

Query: 108 ISQLAKPRCGNPDIIDETADRMLLEHNSDSRHDYHHLPHIVSHFTFFSGMRRWP-STKYH 167
           +SQ+  PRCG PD ++                      H    + +F G  RW       
Sbjct: 110 LSQILLPRCGFPDDVEPKTAPF----------------HTGKKYVYFPGRPRWTRDVPLK 169

Query: 168 LTYAFLPG------TRVDVKAPVARAFATWA 192
           LTYAF            D++    RAF  WA
Sbjct: 170 LTYAFSQENLTPYLAPTDIRRVFRRAFGKWA 172

The following BLAST results are available for this feature:

BLAST of MELO3C010040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899789.1	6.4e-110	100.00	PREDICTED: LOW QUALITY PROTEIN: metalloendoproteinase 1-like [Cucumis melo]	[more]
TYK30629.1	2.4e-109	99.49	metalloendoproteinase 1-like [Cucumis melo var. makuwa]	[more]
KAA0038234.1	1.6e-108	98.47	metalloendoproteinase 1-like [Cucumis melo var. makuwa]	[more]
XP_008443669.1	6.4e-86	80.71	PREDICTED: metalloendoproteinase 2-MMP-like [Cucumis melo] >KAA0038230.1 metallo...	[more]
XP_038880397.1	3.3e-82	78.50	metalloendoproteinase 1-like [Benincasa hispida]	[more]

BLAST of MELO3C010040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUJ5	1.3e-25	37.93	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]
P29136	7.3e-24	43.05	Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2	[more]
O04529	1.2e-21	36.84	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q5XF51	2.0e-21	37.06	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
O23507	3.4e-13	31.28	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]

BLAST of MELO3C010040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUX9	3.1e-110	100.00	LOW QUALITY PROTEIN: metalloendoproteinase 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3E491	1.2e-109	99.49	Metalloendoproteinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7T439	7.6e-109	98.47	Metalloendoproteinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7T4D6	3.1e-86	80.71	Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B8J8	3.1e-86	80.71	metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103487215 PE=3 SV...	[more]

BLAST of MELO3C010040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59970.1	9.4e-27	37.93	Matrixin family protein	[more]
AT1G70170.1	8.3e-23	36.84	matrix metalloproteinase	[more]
AT1G24140.1	1.4e-22	37.06	Matrixin family protein	[more]
AT4G16640.1	2.4e-14	31.28	Matrixin family protein	[more]
AT2G45040.1	5.9e-05	25.83	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 39..196 e-value: 1.9E-24 score: 88.4
IPR002477	Peptidoglycan binding-like	PFAM	PF01471	PG_binding_1	coord: 48..111 e-value: 1.6E-8 score: 34.6
None	No IPR available	PANTHER	PTHR10201:SF269	METALLOENDOPROTEINASE 3-MMP-LIKE	coord: 7..196
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 7..196
IPR021158	Peptidase M10A, cysteine switch, zinc binding site	PROSITE	PS00546	CYSTEINE_SWITCH	coord: 114..121
IPR036365	PGBD-like superfamily	SUPERFAMILY	47090	PGBD-like	coord: 39..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010040.1	MELO3C010040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding