MELO3C009959 (gene) Melon (DHL92) v4

Overview
NameMELO3C009959
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr04: 26546306 .. 26546651 (+)
RNA-Seq ExpressionMELO3C009959
SyntenyMELO3C009959
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACGGTGCTCCACCTTCATTCCGCCGCTATCCGGCCGGAAAACGCCATCCTCCGCCGTAATTCTCTGTCTGTGAAATTTTCCTCATCGCCGGTGGCGGATTTGCCCGAATGTCAGAGGGATTTGGAGTCTTTCCGATCCGTTGCCGTTGGGCCCAATCTATTTGATGTCAGGGCTCTGTTTGTTTGGGTCTAACTATGGTTGAATGAGCTTCTCGCCAGGCCCAATTCAAGCCCAATTAATGTTTCGGCCCATTATCCAAAGGCAAGCATTTTCCAATTAGTTTTGTATCTAATTGGTTTTTAGTTTTAAATTTTTGAAAATTAAGATTATAAAACCTTCC

mRNA sequence

ATGGCCACGGTGCTCCACCTTCATTCCGCCGCTATCCGGCCGGAAAACGCCATCCTCCGCCGTAATTCTCTGTCTGTGAAATTTTCCTCATCGCCGGTGGCGGATTTGCCCGAATGTCAGAGGGATTTGGAGTCTTTCCGATCCGTTGCCGTTGGGCCCAATCTATTTGATGTCAGGGCTCTGTTTGTTTGGGTCTAACTATGGTTGAATGAGCTTCTCGCCAGGCCCAATTCAAGCCCAATTAATGTTTCGGCCCATTATCCAAAGGCAAGCATTTTCCAATTAGTTTTGTATCTAATTGGTTTTTAGTTTTAAATTTTTGAAAATTAAGATTATAAAACCTTCC

Coding sequence (CDS)

ATGGCCACGGTGCTCCACCTTCATTCCGCCGCTATCCGGCCGGAAAACGCCATCCTCCGCCGTAATTCTCTGTCTGTGAAATTTTCCTCATCGCCGGTGGCGGATTTGCCCGAATGTCAGAGGGATTTGGAGTCTTTCCGATCCGTTGCCGTTGGGCCCAATCTATTTGATGTCAGGGCTCTGTTTGTTTGGGTCTAA

Protein sequence

MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRALFVWV
Homology
[Close]
BLAST of MELO3C009959 vs. NCBI nr
Match: KAA0053670.1 (hypothetical protein E6C27_scaffold135G00420 [Cucumis melo var. makuwa] >TYK00839.1 hypothetical protein E5676_scaffold1545G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 130.6 bits (327), Expect = 5.0e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60
          MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA
Sbjct: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60

Query: 61 LFVWV 66
          LFVWV
Sbjct: 61 LFVWV 65

[Close]
BLAST of MELO3C009959 vs. NCBI nr
Match: KGN59669.1 (hypothetical protein Csa_002539 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 2.4e-13
Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60
          MATVLHLHSA      AIL RNS SVKFSSSPVA+L ECQRDL+ FR VAVGPNLF VRA
Sbjct: 1  MATVLHLHSA------AILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRA 55

Query: 61 L 62
          L
Sbjct: 61 L 55

[Close]
BLAST of MELO3C009959 vs. ExPASy TrEMBL
Match: A0A5A7UEN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00420 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.4e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60
          MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA
Sbjct: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60

Query: 61 LFVWV 66
          LFVWV
Sbjct: 61 LFVWV 65

[Close]
BLAST of MELO3C009959 vs. ExPASy TrEMBL
Match: A0A0A0LFH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837020 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-13
Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60
          MATVLHLHSA      AIL RNS SVKFSSSPVA+L ECQRDL+ FR VAVGPNLF VRA
Sbjct: 1  MATVLHLHSA------AILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRA 55

Query: 61 L 62
          L
Sbjct: 61 L 55

The following BLAST results are available for this feature:
BLAST of MELO3C009959 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053670.15.0e-27100.00hypothetical protein E6C27_scaffold135G00420 [Cucumis melo var. makuwa] >TYK0083... [more]
KGN59669.12.4e-1377.05hypothetical protein Csa_002539 [Cucumis sativus][more]
BLAST of MELO3C009959 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C009959 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UEN92.4e-27100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LFH61.2e-1377.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837020 PE=4 SV=1[more]
BLAST of MELO3C009959 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009959.1MELO3C009959.1mRNA