Homology
BLAST of MELO3C009729 vs. NCBI nr
Match:
XP_008443218.1 (PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo] >KAA0053912.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucumis melo var. makuwa] >TYK25493.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucumis melo var. makuwa])
HSP 1 Score: 858.2 bits (2216), Expect = 3.4e-245
Identity = 452/483 (93.58%), Postives = 452/483 (93.58%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM
Sbjct: 301 ----FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
Query: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV
Sbjct: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
Query: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 480
AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN
Sbjct: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 452
Query: 481 GRR 484
GRR
Sbjct: 481 GRR 452
BLAST of MELO3C009729 vs. NCBI nr
Match:
XP_004136624.1 (probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus] >KGN59410.1 hypothetical protein Csa_002527 [Cucumis sativus])
HSP 1 Score: 840.9 bits (2171), Expect = 5.6e-240
Identity = 443/483 (91.72%), Postives = 447/483 (92.55%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDF DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWK+MVD+WVQATAAVQGAEVTPDSK+KSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM
Sbjct: 301 ----FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
Query: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
KEQVVKPNNKPSSNTNSGLLR QKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV
Sbjct: 361 KEQVVKPNNKPSSNTNSGLLRAQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
Query: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 480
AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR+W N
Sbjct: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWAN 452
Query: 481 GRR 484
GRR
Sbjct: 481 GRR 452
BLAST of MELO3C009729 vs. NCBI nr
Match:
XP_038904902.1 (probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida])
HSP 1 Score: 799.7 bits (2064), Expect = 1.4e-227
Identity = 427/484 (88.22%), Postives = 440/484 (90.91%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVN LRKHGSK IRHLARVLIMEWK+MVD WV+ATAAVQGAEVTPDSK+KSA+V
Sbjct: 181 ATEIGKAVNGLRKHGSKHIRHLARVLIMEWKEMVDEWVKATAAVQGAEVTPDSKNKSASV 240
Query: 241 KEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPI 300
KEED+Y EEEGLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 KEEDNYEEEEGLPSPPLDEAAFFTTQPTSMELSQ-------------------------- 300
Query: 301 PSLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQ 360
FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNP R NQQT EVNVL+KEN TQ
Sbjct: 301 -----FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPVRSNQQTALEVNVLAKENMTQ 360
Query: 361 MKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDE 420
MKEQVVKP N+PSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQ N+KCSDE
Sbjct: 361 MKEQVVKP-NRPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQVNYKCSDE 420
Query: 421 VAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWT 480
VAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+W
Sbjct: 421 VAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRNWA 452
Query: 481 NGRR 484
NGRR
Sbjct: 481 NGRR 452
BLAST of MELO3C009729 vs. NCBI nr
Match:
XP_038904903.1 (probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida])
HSP 1 Score: 790.8 bits (2041), Expect = 6.6e-225
Identity = 425/484 (87.81%), Postives = 438/484 (90.50%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVN LRKHGSK IRHLARVLIMEWK+MVD WV+ATAAVQ EVTPDSK+KSA+V
Sbjct: 181 ATEIGKAVNGLRKHGSKHIRHLARVLIMEWKEMVDEWVKATAAVQ--EVTPDSKNKSASV 240
Query: 241 KEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPI 300
KEED+Y EEEGLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 KEEDNYEEEEGLPSPPLDEAAFFTTQPTSMELSQ-------------------------- 300
Query: 301 PSLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQ 360
FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNP R NQQT EVNVL+KEN TQ
Sbjct: 301 -----FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPVRSNQQTALEVNVLAKENMTQ 360
Query: 361 MKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDE 420
MKEQVVKP N+PSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQ N+KCSDE
Sbjct: 361 MKEQVVKP-NRPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQVNYKCSDE 420
Query: 421 VAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWT 480
VAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+W
Sbjct: 421 VAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRNWA 450
Query: 481 NGRR 484
NGRR
Sbjct: 481 NGRR 450
BLAST of MELO3C009729 vs. NCBI nr
Match:
KAG6596180.1 (putative mediator of RNA polymerase II transcription subunit 26b, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027717.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 713.4 bits (1840), Expect = 1.3e-201
Identity = 386/483 (79.92%), Postives = 414/483 (85.71%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGD+ DGETGFKSD AGDG FE GGSKESKVYSSRDD GEMN N+VS
Sbjct: 61 LGCDRVELAVAGDV---DGETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
N+SFGEAEALTDEIEQ+S+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQ
Sbjct: 121 NYSFGEAEALTDEIEQQSEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVN LRKHGSKRIRHL R LI EWK+MVD+WV+ATAAV G+EVTPDSKS A+
Sbjct: 181 ATEIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDMWVKATAAVHGSEVTPDSKSMPASE 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
+EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 QEEDDY-EDGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
FFDGMDDDGNPRNSG+FVK R+N RKTS+G+QNP RC QQTTREVNV++K+NK+QM
Sbjct: 301 ----FFDGMDDDGNPRNSGEFVKKRDNGRKTSSGSQNPMRCKQQTTREVNVVAKDNKSQM 360
Query: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
KEQVVKP NKP SN NSG R QK ST QKDNHEK QRK+EKPTIPKR+ QD FKCSDEV
Sbjct: 361 KEQVVKP-NKPPSNANSGFSRLQKPSTVQKDNHEKLQRKVEKPTIPKRSLQDKFKCSDEV 420
Query: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 480
AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NRHWTN
Sbjct: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDIPKQGMGHRNVHLKSGGHNRHWTN 447
Query: 481 GRR 484
GRR
Sbjct: 481 GRR 447
BLAST of MELO3C009729 vs. ExPASy Swiss-Prot
Match:
Q9FHK9 (Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis thaliana OX=3702 GN=MED26B PE=2 SV=1)
HSP 1 Score: 313.5 bits (802), Expect = 4.1e-84
Identity = 229/497 (46.08%), Postives = 285/497 (57.34%), Query Frame = 0
Query: 5 SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGC 64
SGSLDSWR YF R +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GC
Sbjct: 4 SGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGC 63
Query: 65 DRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKESKVYSSRDDIGEMNCNRVSNF 124
D +EL+V GD + + G TG ++E AGGSKESK SSR D N VSN+
Sbjct: 64 DHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGD----NNQIVSNY 123
Query: 125 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQAT 184
+F EAEAL+DEIE+ S + EV RIKEIL N EDE +SVL +SLR L+LM+L+VD L++T
Sbjct: 124 TFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKST 183
Query: 185 EIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKE 244
EIGKAVN LRKH S +IR LA+ LI EWK++VD WV T + GAE TP+S + S
Sbjct: 184 EIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVL--- 243
Query: 245 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIPSL 304
EEE PS P D FT +P E+S
Sbjct: 244 ---DEEEAFPSLPYD-VDIFTPEPNGFEISH----------------------------- 303
Query: 305 VKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQMKE 364
FFD +D DGNPRNS + +R + R+ N + K TQM+
Sbjct: 304 --FFDSLDFDGNPRNSEEHNTSREHERRPQNIAKR----------------KPEGTQMRI 363
Query: 365 QVVKPNN-KPSSNTN-SGLLRQQKLSTEQKDNHEKFQ-RKLEKPTIPKR----------- 424
Q + KPSS T+ G R K STEQ+ +E K EKP I ++
Sbjct: 364 QDAPFRSIKPSSATDFDGTRRPVKQSTEQRMKNETVSVHKSEKPMIQRKPVVTEQKRKAP 423
Query: 425 -NQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNP 484
QQ+ K D K E KRKLQESYQ ENAKKQRTIQV+E+ +PKQG + P
Sbjct: 424 GPQQEKLKGLD---ADAKFEFAKRKLQESYQHHENAKKQRTIQVLEM--IPKQGSAQK-P 436
BLAST of MELO3C009729 vs. ExPASy Swiss-Prot
Match:
F4J4Y5 (Probable mediator of RNA polymerase II transcription subunit 26a OS=Arabidopsis thaliana OX=3702 GN=MED26A PE=3 SV=1)
HSP 1 Score: 229.6 bits (584), Expect = 7.7e-59
Identity = 187/480 (38.96%), Postives = 250/480 (52.08%), Query Frame = 0
Query: 5 SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
S SLD+WR YFR +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSF 124
+EL++AGD + A + GG +
Sbjct: 67 HLELSIAGD------------EAAVEIVGVGGGGDR------------------------ 126
Query: 125 GEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEI 184
G++ T E E+ S V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEI
Sbjct: 127 GDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEI 186
Query: 185 GKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEED 244
GKAVN LR+H S +I LA+ L EWK +VD W+ + G E TP+S + S
Sbjct: 187 GKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI----- 246
Query: 245 DYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIPSLVK 304
EEE PSPP D + +P ELSQ
Sbjct: 247 -DEEEAFPSPPHD-LDIYAPEPNGFELSQ------------------------------- 306
Query: 305 FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSK---ENKTQMK 364
D +D DGNPR+S V++++ + S+ + P + T + NV+ + + +T+ +
Sbjct: 307 ILDCLDCDGNPRHS---VESKHERKSQSSAGRRP-----KGTNDANVVGRYCNDQQTRRE 366
Query: 365 EQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCS 424
E V+P K S+ RQ K S EQ + QRK T KR QQD K
Sbjct: 367 EADVRP-MKHSATDVVEPKRQTKQSREQMVS--AIQRKPTAVTEQKRKLAGPQQDKLKAL 395
Query: 425 DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRH 478
D K E KRKLQESY Q ENAK+QRTIQV+E +PKQ + P LK R+
Sbjct: 427 DP---DSKFEFAKRKLQESYHQHENAKRQRTIQVLE--TIPKQN-KVQKPQLKRPATRRY 395
BLAST of MELO3C009729 vs. ExPASy Swiss-Prot
Match:
F4KFC7 (Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis thaliana OX=3702 GN=MED26C PE=1 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 1.0e-18
Identity = 126/480 (26.25%), Postives = 202/480 (42.08%), Query Frame = 0
Query: 8 LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-- 67
LD +R+ NA D++ ID AILVA+ D +E + RRD I E+L++ + +C CD
Sbjct: 3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62
Query: 68 ---RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSN 127
V A G ++ G E +E ++ +++ E + N +
Sbjct: 63 GGGNVTEAAIGRVNN------------GRVHEETEEEDEEGVTAAAEEEVREKSVNVEDD 122
Query: 128 FSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQA 187
F L D+ EQ+S ++ IKE L + D S+ L E L+ LE M ++ LQ
Sbjct: 123 DDFDPFAGLFDD-EQKS-----IVEIKEKLED-PDLSEESLVELLQNLEDMDITFQALQE 182
Query: 188 TEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVK 247
T+IG+ VN +RKH S +R LA+ L+ +WK+ VD WV+ Q ++ P S +
Sbjct: 183 TDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFN---QPGDLEPPS-----LIA 242
Query: 248 EEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIPS 307
+ED ++ L + + ++ F YS P+P
Sbjct: 243 DEDSPVQKALHN------------GSRQQVPDFGYS--------------------PVP- 302
Query: 308 LVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQMK 367
N +S+ N N T + + K
Sbjct: 303 ------------------------QNGYSSSSKNSNIT-----------------EPERK 353
Query: 368 EQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVA 427
+ V P + S + + KP+ P +QQ + D+
Sbjct: 363 PRPVAPQPRRESPSPA------------------------KPSRPSPSQQTIPR--DKEH 353
Query: 428 VQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFN---RHW 479
+V + +++LQ++Y+QAENAKKQRTIQVM++HD+PK G P + GG + RHW
Sbjct: 423 KEVDFDTARKRLQQNYRQAENAKKQRTIQVMDIHDIPKPKKGGFFP--RKGGSSQGGRHW 353
BLAST of MELO3C009729 vs. ExPASy TrEMBL
Match:
A0A5A7UDQ2 (Putative mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006410 PE=4 SV=1)
HSP 1 Score: 858.2 bits (2216), Expect = 1.6e-245
Identity = 452/483 (93.58%), Postives = 452/483 (93.58%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM
Sbjct: 301 ----FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
Query: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV
Sbjct: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
Query: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 480
AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN
Sbjct: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 452
Query: 481 GRR 484
GRR
Sbjct: 481 GRR 452
BLAST of MELO3C009729 vs. ExPASy TrEMBL
Match:
A0A1S3B7K4 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo OX=3656 GN=LOC103486863 PE=4 SV=1)
HSP 1 Score: 858.2 bits (2216), Expect = 1.6e-245
Identity = 452/483 (93.58%), Postives = 452/483 (93.58%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM
Sbjct: 301 ----FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
Query: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV
Sbjct: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
Query: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 480
AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN
Sbjct: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 452
Query: 481 GRR 484
GRR
Sbjct: 481 GRR 452
BLAST of MELO3C009729 vs. ExPASy TrEMBL
Match:
A0A0A0LBK9 (TFIIS N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G817210 PE=4 SV=1)
HSP 1 Score: 840.9 bits (2171), Expect = 2.7e-240
Identity = 443/483 (91.72%), Postives = 447/483 (92.55%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDF DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWK+MVD+WVQATAAVQGAEVTPDSK+KSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM
Sbjct: 301 ----FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
Query: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
KEQVVKPNNKPSSNTNSGLLR QKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV
Sbjct: 361 KEQVVKPNNKPSSNTNSGLLRAQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
Query: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 480
AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR+W N
Sbjct: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWAN 452
Query: 481 GRR 484
GRR
Sbjct: 481 GRR 452
BLAST of MELO3C009729 vs. ExPASy TrEMBL
Match:
A0A6J1FCK1 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita moschata OX=3662 GN=LOC111442859 PE=4 SV=1)
HSP 1 Score: 713.0 bits (1839), Expect = 8.5e-202
Identity = 386/483 (79.92%), Postives = 413/483 (85.51%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGD+ DGETGFKSD AGDG FE GGSKESKVYSSRDD GEMN N+VS
Sbjct: 61 LGCDRVELAVAGDV---DGETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
N+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQ
Sbjct: 121 NYSFGEAEALTDEIEQESEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVN LRKHGSKRIRHL R LI EWK+MVD+WV+ATAAV G+EVTPDSKS +
Sbjct: 181 ATEIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDMWVKATAAVHGSEVTPDSKSMPVSE 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
+EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 QEEDDY-EDGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQM 360
FFDGMDDDGNPRNSG+FVK R+N RKTS+G+QNP RC QQTTREVNV++K+NK+QM
Sbjct: 301 ----FFDGMDDDGNPRNSGEFVKKRDNGRKTSSGSQNPMRCKQQTTREVNVVAKDNKSQM 360
Query: 361 KEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEV 420
KEQVVKP NKP SN NSG R QK ST QKDNHEK QRK+EKPTIPKR+ QD FKCSDEV
Sbjct: 361 KEQVVKP-NKPPSNANSGFSRLQKPSTVQKDNHEKLQRKVEKPTIPKRSLQDKFKCSDEV 420
Query: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTN 480
AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NRHWTN
Sbjct: 421 AVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDIPKQGMGHRNVHLKSGGHNRHWTN 447
Query: 481 GRR 484
GRR
Sbjct: 481 GRR 447
BLAST of MELO3C009729 vs. ExPASy TrEMBL
Match:
A0A6J1I7W1 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita maxima OX=3661 GN=LOC111469992 PE=4 SV=1)
HSP 1 Score: 709.5 bits (1830), Expect = 9.4e-201
Identity = 389/489 (79.55%), Postives = 414/489 (84.66%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGD+ D ETGFKSD AGDG FE GGSKESKVYSSRDD GEMN N+VS
Sbjct: 61 LGCDRVELAVAGDV---DCETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
N+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQ
Sbjct: 121 NYSFGEAEALTDEIEQESEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
ATEIGKAVN LRKHGSKRIRHL R LI EWK+MVD+WV+ATAAV G+EVTPDSKS A+
Sbjct: 181 ATEIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDLWVKATAAVHGSEVTPDSKSMPASE 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIP 300
+EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQ
Sbjct: 241 QEEDDY-EDGLPSPPLDEAAFFTTQPTSMELSQ--------------------------- 300
Query: 301 SLVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVL------SK 360
FFDGMDDDGNPRNSG+FVK R+N RKTSNG+QNP RC QQTTREVNV+ SK
Sbjct: 301 ----FFDGMDDDGNPRNSGEFVKERDNGRKTSNGSQNPMRCKQQTTREVNVVAKDNRESK 360
Query: 361 ENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNF 420
+NK+QMKEQVVKP NKP SN NSGL R QK ST QKDNHEK QRK+EKPTIPKR+ QD F
Sbjct: 361 DNKSQMKEQVVKP-NKPPSNANSGLSRPQKPSTVQKDNHEKLQRKVEKPTIPKRSLQDKF 420
Query: 421 KCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF 480
KCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG
Sbjct: 421 KCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDIPKQGMGHRNVHLKSGGH 453
Query: 481 NRHWTNGRR 484
NRHWTNGRR
Sbjct: 481 NRHWTNGRR 453
BLAST of MELO3C009729 vs. TAIR 10
Match:
AT5G05140.1 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 313.5 bits (802), Expect = 2.9e-85
Identity = 229/497 (46.08%), Postives = 285/497 (57.34%), Query Frame = 0
Query: 5 SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGC 64
SGSLDSWR YF R +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GC
Sbjct: 4 SGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGC 63
Query: 65 DRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKESKVYSSRDDIGEMNCNRVSNF 124
D +EL+V GD + + G TG ++E AGGSKESK SSR D N VSN+
Sbjct: 64 DHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGD----NNQIVSNY 123
Query: 125 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQAT 184
+F EAEAL+DEIE+ S + EV RIKEIL N EDE +SVL +SLR L+LM+L+VD L++T
Sbjct: 124 TFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKST 183
Query: 185 EIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKE 244
EIGKAVN LRKH S +IR LA+ LI EWK++VD WV T + GAE TP+S + S
Sbjct: 184 EIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVL--- 243
Query: 245 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIPSL 304
EEE PS P D FT +P E+S
Sbjct: 244 ---DEEEAFPSLPYD-VDIFTPEPNGFEISH----------------------------- 303
Query: 305 VKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQMKE 364
FFD +D DGNPRNS + +R + R+ N + K TQM+
Sbjct: 304 --FFDSLDFDGNPRNSEEHNTSREHERRPQNIAKR----------------KPEGTQMRI 363
Query: 365 QVVKPNN-KPSSNTN-SGLLRQQKLSTEQKDNHEKFQ-RKLEKPTIPKR----------- 424
Q + KPSS T+ G R K STEQ+ +E K EKP I ++
Sbjct: 364 QDAPFRSIKPSSATDFDGTRRPVKQSTEQRMKNETVSVHKSEKPMIQRKPVVTEQKRKAP 423
Query: 425 -NQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNP 484
QQ+ K D K E KRKLQESYQ ENAKKQRTIQV+E+ +PKQG + P
Sbjct: 424 GPQQEKLKGLD---ADAKFEFAKRKLQESYQHHENAKKQRTIQVLEM--IPKQGSAQK-P 436
BLAST of MELO3C009729 vs. TAIR 10
Match:
AT3G10820.2 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 229.6 bits (584), Expect = 5.5e-60
Identity = 187/480 (38.96%), Postives = 250/480 (52.08%), Query Frame = 0
Query: 5 SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
S SLD+WR YFR +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSF 124
+EL++AGD + A + GG +
Sbjct: 67 HLELSIAGD------------EAAVEIVGVGGGGDR------------------------ 126
Query: 125 GEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEI 184
G++ T E E+ S V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEI
Sbjct: 127 GDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEI 186
Query: 185 GKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEED 244
GKAVN LR+H S +I LA+ L EWK +VD W+ + G E TP+S + S
Sbjct: 187 GKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI----- 246
Query: 245 DYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIPSLVK 304
EEE PSPP D + +P ELSQ
Sbjct: 247 -DEEEAFPSPPHD-LDIYAPEPNGFELSQ------------------------------- 306
Query: 305 FFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSK---ENKTQMK 364
D +D DGNPR+S V++++ + S+ + P + T + NV+ + + +T+ +
Sbjct: 307 ILDCLDCDGNPRHS---VESKHERKSQSSAGRRP-----KGTNDANVVGRYCNDQQTRRE 366
Query: 365 EQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCS 424
E V+P K S+ RQ K S EQ + QRK T KR QQD K
Sbjct: 367 EADVRP-MKHSATDVVEPKRQTKQSREQMVS--AIQRKPTAVTEQKRKLAGPQQDKLKAL 395
Query: 425 DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRH 478
D K E KRKLQESY Q ENAK+QRTIQV+E +PKQ + P LK R+
Sbjct: 427 DP---DSKFEFAKRKLQESYHQHENAKRQRTIQVLE--TIPKQN-KVQKPQLKRPATRRY 395
BLAST of MELO3C009729 vs. TAIR 10
Match:
AT3G10820.1 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 201.1 bits (510), Expect = 2.1e-51
Identity = 122/279 (43.73%), Postives = 163/279 (58.42%), Query Frame = 0
Query: 5 SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
S SLD+WR YFR +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSF 124
+EL++AGD + A + GG +
Sbjct: 67 HLELSIAGD------------EAAVEIVGVGGGGDR------------------------ 126
Query: 125 GEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEI 184
G++ T E E+ S V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEI
Sbjct: 127 GDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEI 186
Query: 185 GKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEED 244
GKAVN LR+H S +I LA+ L EWK +VD W+ + G E TP+S + S
Sbjct: 187 GKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI----- 242
Query: 245 DYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLL 284
EEE PSPP D + +P ELSQ ++ L+
Sbjct: 247 -DEEEAFPSPPHD-LDIYAPEPNGFELSQIVWTAMEILV 242
BLAST of MELO3C009729 vs. TAIR 10
Match:
AT5G09850.1 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 96.3 bits (238), Expect = 7.2e-20
Identity = 126/480 (26.25%), Postives = 202/480 (42.08%), Query Frame = 0
Query: 8 LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-- 67
LD +R+ NA D++ ID AILVA+ D +E + RRD I E+L++ + +C CD
Sbjct: 3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62
Query: 68 ---RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSN 127
V A G ++ G E +E ++ +++ E + N +
Sbjct: 63 GGGNVTEAAIGRVNN------------GRVHEETEEEDEEGVTAAAEEEVREKSVNVEDD 122
Query: 128 FSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQA 187
F L D+ EQ+S ++ IKE L + D S+ L E L+ LE M ++ LQ
Sbjct: 123 DDFDPFAGLFDD-EQKS-----IVEIKEKLED-PDLSEESLVELLQNLEDMDITFQALQE 182
Query: 188 TEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVK 247
T+IG+ VN +RKH S +R LA+ L+ +WK+ VD WV+ Q ++ P S +
Sbjct: 183 TDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFN---QPGDLEPPS-----LIA 242
Query: 248 EEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFCYSEASYLLQAESVLINCILLSVPIPS 307
+ED ++ L + + ++ F YS P+P
Sbjct: 243 DEDSPVQKALHN------------GSRQQVPDFGYS--------------------PVP- 302
Query: 308 LVKFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQMK 367
N +S+ N N T + + K
Sbjct: 303 ------------------------QNGYSSSSKNSNIT-----------------EPERK 353
Query: 368 EQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVA 427
+ V P + S + + KP+ P +QQ + D+
Sbjct: 363 PRPVAPQPRRESPSPA------------------------KPSRPSPSQQTIPR--DKEH 353
Query: 428 VQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFN---RHW 479
+V + +++LQ++Y+QAENAKKQRTIQVM++HD+PK G P + GG + RHW
Sbjct: 423 KEVDFDTARKRLQQNYRQAENAKKQRTIQVMDIHDIPKPKKGGFFP--RKGGSSQGGRHW 353
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008443218.1 | 3.4e-245 | 93.58 | PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cuc... | [more] |
XP_004136624.1 | 5.6e-240 | 91.72 | probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativu... | [more] |
XP_038904902.1 | 1.4e-227 | 88.22 | probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Ben... | [more] |
XP_038904903.1 | 6.6e-225 | 87.81 | probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Ben... | [more] |
KAG6596180.1 | 1.3e-201 | 79.92 | putative mediator of RNA polymerase II transcription subunit 26b, partial [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9FHK9 | 4.1e-84 | 46.08 | Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis ... | [more] |
F4J4Y5 | 7.7e-59 | 38.96 | Probable mediator of RNA polymerase II transcription subunit 26a OS=Arabidopsis ... | [more] |
F4KFC7 | 1.0e-18 | 26.25 | Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UDQ2 | 1.6e-245 | 93.58 | Putative mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo... | [more] |
A0A1S3B7K4 | 1.6e-245 | 93.58 | probable mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo... | [more] |
A0A0A0LBK9 | 2.7e-240 | 91.72 | TFIIS N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8... | [more] |
A0A6J1FCK1 | 8.5e-202 | 79.92 | probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita mo... | [more] |
A0A6J1I7W1 | 9.4e-201 | 79.55 | probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita ma... | [more] |
Match Name | E-value | Identity | Description | |
AT5G05140.1 | 2.9e-85 | 46.08 | Transcription elongation factor (TFIIS) family protein | [more] |
AT3G10820.2 | 5.5e-60 | 38.96 | Transcription elongation factor (TFIIS) family protein | [more] |
AT3G10820.1 | 2.1e-51 | 43.73 | Transcription elongation factor (TFIIS) family protein | [more] |
AT5G09850.1 | 7.2e-20 | 26.25 | Transcription elongation factor (TFIIS) family protein | [more] |