MELO3C009699 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009699
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 28900124 .. 28900387 (+)
RNA-Seq Expression	MELO3C009699
Synteny	MELO3C009699

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCTCCCTCCAAACTCTTCCTCTGCTTCTGTTTTTTCATTTTCTTGATAATTAGCAGTAGCCTTGCTGCTGTGCAGCGGCCCAATGGCGGCGGTGGTGGAGGAGGTGGAGGAGGGTCTGGTAGCGCATCGAGTAGCGGCGGAGGTTCAGCTTCTGGGTCTGGGTCTGGGTCCGGATCCGGTAGTGGCGGTGGGTCCGGTTTCAATGGAGTTTCTGCTGATCAGGCCAGTGGGTTGAACCACAGGAAGGTTTCTCCTTGA

mRNA sequence

ATGGCCTCTCCCTCCAAACTCTTCCTCTGCTTCTGTTTTTTCATTTTCTTGATAATTAGCAGTAGCCTTGCTGCTGTGCAGCGGCCCAATGGCGGCGGTGGTGGAGGAGGTGGAGGAGGGTCTGGTAGCGCATCGAGTAGCGGCGGAGGTTCAGCTTCTGGGTCTGGGTCTGGGTCCGGATCCGGTAGTGGCGGTGGGTCCGGTTTCAATGGAGTTTCTGCTGATCAGGCCAGTGGGTTGAACCACAGGAAGGTTTCTCCTTGA

Coding sequence (CDS)

ATGGCCTCTCCCTCCAAACTCTTCCTCTGCTTCTGTTTTTTCATTTTCTTGATAATTAGCAGTAGCCTTGCTGCTGTGCAGCGGCCCAATGGCGGCGGTGGTGGAGGAGGTGGAGGAGGGTCTGGTAGCGCATCGAGTAGCGGCGGAGGTTCAGCTTCTGGGTCTGGGTCTGGGTCCGGATCCGGTAGTGGCGGTGGGTCCGGTTTCAATGGAGTTTCTGCTGATCAGGCCAGTGGGTTGAACCACAGGAAGGTTTCTCCTTGA

Protein sequence

MASPSKLFLCFCFFIFLIISSSLAAVQRPNGGGGGGGGGGSGSASSSGGGSASGSGSGSGSGSGGGSGFNGVSADQASGLNHRKVSP

Homology

[Close]

BLAST of MELO3C009699 vs. NCBI nr
Match: KGN59380.1 (hypothetical protein Csa_000800 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 1.8e-16
Identity = 70/88 (79.55%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MASPSKLFLCFCFFIFLIISSSLAAVQRPN-GGGGGGGGGGSGSASSSGGGSASGSGSGS 60
          MAS SKLFLCFCFFIFLI SS+LAAVQRPN GGGGGGGGGGSGS SSSG GSASGSGSGS
Sbjct: 1  MASSSKLFLCFCFFIFLISSSALAAVQRPNGGGGGGGGGGGSGSGSSSGSGSASGSGSGS 60

Query: 61 GSGSGGGSGFNGVSADQASGLNHRKVSP 88
          GSG G G    G+S+DQA G  HRK SP
Sbjct: 61 GSGGGSGDSV-GISSDQAGGSTHRKASP 87

[Close]

BLAST of MELO3C009699 vs. ExPASy TrEMBL
Match: A0A0A0LBI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815440 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.9e-17
Identity = 70/88 (79.55%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MASPSKLFLCFCFFIFLIISSSLAAVQRPN-GGGGGGGGGGSGSASSSGGGSASGSGSGS 60
          MAS SKLFLCFCFFIFLI SS+LAAVQRPN GGGGGGGGGGSGS SSSG GSASGSGSGS
Sbjct: 1  MASSSKLFLCFCFFIFLISSSALAAVQRPNGGGGGGGGGGGSGSGSSSGSGSASGSGSGS 60

Query: 61 GSGSGGGSGFNGVSADQASGLNHRKVSP 88
          GSG G G    G+S+DQA G  HRK SP
Sbjct: 61 GSGGGSGDSV-GISSDQAGGSTHRKASP 87

The following BLAST results are available for this feature:

BLAST of MELO3C009699 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59380.1	1.8e-16	79.55	hypothetical protein Csa_000800 [Cucumis sativus]	[more]

BLAST of MELO3C009699 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C009699 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBI4	8.9e-17	79.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815440 PE=4 SV=1	[more]

BLAST of MELO3C009699 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009699.1	MELO3C009699.1	mRNA