MELO3C009606 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009606
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Mic1 domain-containing protein
Location	chr04: 29652243 .. 29654589 (+)
RNA-Seq Expression	MELO3C009606
Synteny	MELO3C009606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGAACGCTGCCGCCTGAAGTAAATGCATAAGAAAAACTTCATCTTTCTCCGTTTCTCTCAACTAATAATTTCACACTCATAGCCTCTCTTCATCCATCTATCGATCTCTTCTCACTGAATCGCGAGCTTATCTGCGATTTCTTTCTTATGGGTGCTGCCTGATTCGGTAAATCACCTGTCTTTTTCCATCGTTTTCTTATTTTTAGAAAAATCGGGGTCAATTCTCCCATCAATTTCTAGGATACATCCCCTAGAAGTCGGAAATTTTGAGGAGTCAGATTATAGGTCACAATTTGAAATGTGGGTTGTTATCTCTTAGTGAAATTCTGCTTTGTTATACTGTGATATGAAGCTTTATTGATTATAAATGATTGCTTTCTATGTATATTGTACGTGAATTTTCGCAGTGCTATGGACCAGAAGGATAGAGCAACAGCTTCCTTGCTCAAGCGTGTTTTAGTTTCTTGTGCGTCTCAGGTATGTGAAGGGATTGAAAGTGAAACATGGATACCGGAAGACTGGAATGTATTCTTCTTTTAAGTGTAATTCTATAAATTCAGTGAGATATGGTCATTGGATTGTCTTTTTTTTTTTTTGTTAGAATCATAACCTTGGTTGAGGATCGGGTTCTTGTTCCTTAGCCTATGCTTACCTAATTATGTTGATGAATTTGATTCCTACAAATAGAAGAGTAAAGCTAATTTTTACTGCAAAGAAATCAACAATGACACCCTCTCTTTGAAATTTCCGTTCATATTCCCAAAATTATATGCATTTCCTAAAATTTCCGTTTATTAGTTTGGTCTCTTTTGGATTGGAGTCTTTTCTTGAAGTTGAGGACTTCTTTTATGGTCGTGTTTTTTGTTTGCATTTGTTTCTCTCTTTTTTTCTCAATGAAAACTCTGGTTCTTGTAAAAGGGATTAGAAAAAAAAAAAAAAAAAAAAAAAAAGAGTTGAAGAGTTTCATTGTGGAATTTTTTTTCAAAATAGCATCAACACTTGTGAGTCTATGACTGGGTTCCGAGACAGAGTTCCAGCTAAAGCCCTTTCCCTAGTTGATATACCTTGTAAAAGCCATTAGTTGAAGTTCTTTAGGCACATTATTTTGTAGTTGCATGAATTTTTTATCAATAAGAAACTACACGTTCATTGAGAAACATGAAATAAATGAGAGAAAGAAGGCCATACTTAAAATAAAATAAATTAAACAGCTTGAGAAAGGGTGCTTCAATGACCAGCTATACTGAAAAAAATAGTTACAAATCTCTTTTACAGCTGAAGTTCAAAGAGACACTTCAAACCTCACTAGGATTTGGGATCAAAGCTCCTCACTAGATTTCTGTATCTCCTAAAGAACCTATTATTTAGCTCAATCCGAATGCATTTAAAGGATTTGTAAAGCAAGTAGCTCTACACAAGAACTGCACTTTATCTCTAAGGAACTTCATAAATGAAGGACGCAGAATTCCCTTGTTAGGGGCACTTTGTTTGGTTCCCTTGTTACAAGAGGACTTGTATTCTTGGCTCTTAAGTTGGTTTTATCAAAAAAGGAAAAAAAAGGGAAGTTGGTTTTAGTTTCCCCTCCTAAATATATCTGTTTCTTATATCAAAAAGTTACATTTCATGAACTTCACGTGTTGCTTAGTAGCTAACATACTGTATTGCAATCTGATGGTTCTCAACCAGTCAACCTTCATGCTTGCTGCTTCTATAAAGTCTTGTATTGTTTTGTTTGTTTTTTAACCCTCCATGTTCAGGGTAGCTTAAGGATAGCTTCACTGTCTCACCGATTTGTGAGACAATCTCTTAAATAGGTGGCTATCATTGTTCGAACCCACAACCTCTAAAGTACTTGGGTTTATAGTTTTGACTCTTTTGATTGCTTTGGCCAACCATTGTAGTTTGCTTCTAGAAAATATCAAGTTCCAATATCTGCAACATATGGTTGATACCATTTCGCGCCTTCGTGTTTATGGGACTGTTAAGAACTTTGAAAAAAATAATTTTTTATTGTTTGAATTGTGATTCAAATGATTTAGGAAAGTAAGAGAACATGGAACAGGGGCTGATACTTAATTTGTGTTATTTTCATGCATTATATGTACATATATACATCGTGGTTGGTTTTCCACAACCATTTATTATACATATGTGTGTGTATAGAGTATAATTTTAAAATCAATCAATCAATCAATTGTTTGTGTAGGCAAAACAATATGGGGGTTGTGTTGCGGCGAAGGTTCCAAAAGTTGAACGTGATATGTGTTTGAAAGAATTTATTGCACTAAAGTCTTGCATGCAAAATACGGTATCTATCAATAATTACAATTTATTTTTTAACTGA

mRNA sequence

AGAAGAACGCTGCCGCCTGAAGTAAATGCATAAGAAAAACTTCATCTTTCTCCGTTTCTCTCAACTAATAATTTCACACTCATAGCCTCTCTTCATCCATCTATCGATCTCTTCTCACTGAATCGCGAGCTTATCTGCGATTTCTTTCTTATGGGTGCTGCCTGATTCGGTAAATCACCTGTCTTTTTCCATCGTTTTCTTATTTTTAGAAAAATCGGGGTCAATTCTCCCATCAATTTCTAGGATACATCCCCTAGAAGTCGGAAATTTTGAGGAGTCAGATTATAGGTCACAATTTGAAATGTGGGTTGTTATCTCTTAGTGAAATTCTGCTTTGTTATACTGTGATATGAAGCTTTATTGATTATAAATGATTGCTTTCTATGTATATTGTACGTGAATTTTCGCAGTGCTATGGACCAGAAGGATAGAGCAACAGCTTCCTTGCTCAAGCGTGTTTTAGTTTCTTGTGCGTCTCAGGCAAAACAATATGGGGGTTGTGTTGCGGCGAAGGTTCCAAAAGTTGAACGTGATATGTGTTTGAAAGAATTTATTGCACTAAAGTCTTGCATGCAAAATACGGTATCTATCAATAATTACAATTTATTTTTTAACTGA

Coding sequence (CDS)

ATGGACCAGAAGGATAGAGCAACAGCTTCCTTGCTCAAGCGTGTTTTAGTTTCTTGTGCGTCTCAGGCAAAACAATATGGGGGTTGTGTTGCGGCGAAGGTTCCAAAAGTTGAACGTGATATGTGTTTGAAAGAATTTATTGCACTAAAGTCTTGCATGCAAAATACGGTATCTATCAATAATTACAATTTATTTTTTAACTGA

Protein sequence

MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTVSINNYNLFFN

Homology

[Close]

BLAST of MELO3C009606 vs. NCBI nr
Match: XP_016899714.1 (PREDICTED: uncharacterized protein LOC107990619 [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 6.5e-22
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTV 58
          MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNT+
Sbjct: 1  MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTL 57

[Close]

BLAST of MELO3C009606 vs. NCBI nr
Match: KAE8651130.1 (hypothetical protein Csa_002376 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 2.5e-21
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNT 57
          MD+KDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNT
Sbjct: 7  MDRKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNT 62

[Close]

BLAST of MELO3C009606 vs. NCBI nr
Match: KAG6580793.1 (hypothetical protein SDJN03_20795, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 52/57 (91.23%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1   MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTV 58
           MD+KD+ATASLLKRVLV+CASQAKQYGGCVA+KVPKVERDMCLKEFIALKSCMQNT+
Sbjct: 98  MDRKDKATASLLKRVLVTCASQAKQYGGCVASKVPKVERDMCLKEFIALKSCMQNTL 154

[Close]

BLAST of MELO3C009606 vs. NCBI nr
Match: ONH95644.1 (hypothetical protein PRUPE_7G082600 [Prunus persica])

HSP 1 Score: 93.6 bits (231), Expect = 7.0e-16
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 4  KDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTVSINN 62
          K+R + S LKR+LV+CA+QAK+YGGCVAAKVP+VERDMCLKEF+ALKSCMQN V  +N
Sbjct: 2  KERNSTSTLKRILVTCAAQAKEYGGCVAAKVPQVERDMCLKEFLALKSCMQNVVRFHN 59

[Close]

BLAST of MELO3C009606 vs. NCBI nr
Match: TQD99061.1 (hypothetical protein C1H46_015328 [Malus baccata])

HSP 1 Score: 93.2 bits (230), Expect = 9.1e-16
Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 4  KDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTVS 59
          K+R + S LKR+LV+CA+QAK+YGGCVAAKVP+VERDMCLKEF+ALKSCMQN VS
Sbjct: 2  KERNSTSTLKRILVTCAAQAKEYGGCVAAKVPQVERDMCLKEFLALKSCMQNVVS 56

[Close]

BLAST of MELO3C009606 vs. ExPASy TrEMBL
Match: A0A1S4DUQ7 (uncharacterized protein LOC107990619 OS=Cucumis melo OX=3656 GN=LOC107990619 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-22
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTV 58
          MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNT+
Sbjct: 1  MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTL 57

[Close]

BLAST of MELO3C009606 vs. ExPASy TrEMBL
Match: A0A0A0LB85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G799640 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTV 58
          MD+KDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNT+
Sbjct: 34 MDRKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTL 90

[Close]

BLAST of MELO3C009606 vs. ExPASy TrEMBL
Match: A0A251NBK5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G082600 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-16
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 4  KDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTVSINN 62
          K+R + S LKR+LV+CA+QAK+YGGCVAAKVP+VERDMCLKEF+ALKSCMQN V  +N
Sbjct: 2  KERNSTSTLKRILVTCAAQAKEYGGCVAAKVPQVERDMCLKEFLALKSCMQNVVRFHN 59

[Close]

BLAST of MELO3C009606 vs. ExPASy TrEMBL
Match: A0A540MJV7 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_015328 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.4e-16
Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 4  KDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTVS 59
          K+R + S LKR+LV+CA+QAK+YGGCVAAKVP+VERDMCLKEF+ALKSCMQN VS
Sbjct: 2  KERNSTSTLKRILVTCAAQAKEYGGCVAAKVPQVERDMCLKEFLALKSCMQNVVS 56

[Close]

BLAST of MELO3C009606 vs. ExPASy TrEMBL
Match: A0A3N7G3J9 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G060550 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.5e-16
Identity = 41/54 (75.93%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 4  KDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTV 58
          K+R T S L+RVLV+CA+QAK+YGGCVAAKVP++ERDMCLKEF+ALK+CMQNT+
Sbjct: 2  KERNTTSTLRRVLVNCAAQAKEYGGCVAAKVPEIERDMCLKEFLALKNCMQNTI 55

[Close]

BLAST of MELO3C009606 vs. TAIR 10
Match: AT3G12012.1 (conserved peptide upstream open reading frame 20 )

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-16
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 0


Query: 1  MDQKDRATASLLKRVLVSCASQAKQYGGCVAAKVPKVERDMCLKEFIALKSCMQNTV 58
          M +K+  TAS L R+L +C+ QAK YG CVA+KV +VERD+CLKEF+ALKSCMQ+T+
Sbjct: 1  MKEKNSTTASTLGRILATCSKQAKDYGSCVASKVHEVERDICLKEFLALKSCMQHTI 57

The following BLAST results are available for this feature:

BLAST of MELO3C009606 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899714.1	6.5e-22	98.25	PREDICTED: uncharacterized protein LOC107990619 [Cucumis melo]	[more]
KAE8651130.1	2.5e-21	98.21	hypothetical protein Csa_002376 [Cucumis sativus]	[more]
KAG6580793.1	2.1e-20	91.23	hypothetical protein SDJN03_20795, partial [Cucurbita argyrosperma subsp. sorori...	[more]
ONH95644.1	7.0e-16	74.14	hypothetical protein PRUPE_7G082600 [Prunus persica]	[more]
TQD99061.1	9.1e-16	78.18	hypothetical protein C1H46_015328 [Malus baccata]	[more]

BLAST of MELO3C009606 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C009606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUQ7	3.2e-22	98.25	uncharacterized protein LOC107990619 OS=Cucumis melo OX=3656 GN=LOC107990619 PE=...	[more]
A0A0A0LB85	9.2e-22	96.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G799640 PE=4 SV=1	[more]
A0A251NBK5	3.4e-16	74.14	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G082600 PE=4 SV=1	[more]
A0A540MJV7	4.4e-16	78.18	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_015328 PE=4 SV=1	[more]
A0A3N7G3J9	7.5e-16	75.93	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G060550 PE=4 ...	[more]

BLAST of MELO3C009606 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12012.1	9.7e-16	63.16	conserved peptide upstream open reading frame 20	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034595	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8	PANTHER	PTHR34561	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 8	coord: 3..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009606.1	MELO3C009606.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005739	mitochondrion