MELO3C009554 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009554
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-H2 finger protein ATL70-like
Location	chr04: 30059626 .. 30060199 (-)
RNA-Seq Expression	MELO3C009554
Synteny	MELO3C009554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCCCCTCGGACTCCGGCGGCGGCGACATCGGTAGTTTCCCCTTCATCGTCGGAATTTCAGTCGGAATCCTCTTCCTCCTCACAACCCTTACAATCACTACCTATTTATGTACCAGAACCACCGTTCCGCAGCCGAATCGCCGTCTCCAGCAGGAGGGACGGCGGGATTTCGTCGTGGATTTTGTACAGGGGCTAGAAGATGAGGTTATTAATGGATATCCGAAGATTCTGTACTCGGAGGCGAAATTGGAAAGGAAATTGGAGTCCGCCGCCGCGAATGGTTGTTCGATTTGTTTGGTGGATTATAAAGACGACGACGTTTTGCGGTTGTTGCCAGACTGTGGCCATCTGTTTCACGGTAGTTGTATTGATCCATGGTTGCGGCTGAACCCTAGCTGCCCTGTTTGTAGAACTTCGCCACTACCGACGCCGATCTCCACCCCTTTGGCGGAGGTCGTTCCGTTGGCCATCGGAAGAAGTTGAAAAAACTGACGTGTAAATATATATTTTTTTTGTTTTTTTTTCCATAGCAATATTATTTTTCTTTCTTTATTTGTTACGTAGAGGT

mRNA sequence

ATGAACTCCCCCTCGGACTCCGGCGGCGGCGACATCGGTAGTTTCCCCTTCATCGTCGGAATTTCAGTCGGAATCCTCTTCCTCCTCACAACCCTTACAATCACTACCTATTTATGTACCAGAACCACCGTTCCGCAGCCGAATCGCCGTCTCCAGCAGGAGGGACGGCGGGATTTCGTCGTGGATTTTGTACAGGGGCTAGAAGATGAGGTTATTAATGGATATCCGAAGATTCTGTACTCGGAGGCGAAATTGGAAAGGAAATTGGAGTCCGCCGCCGCGAATGGTTGTTCGATTTGTTTGGTGGATTATAAAGACGACGACGTTTTGCGGTTGTTGCCAGACTGTGGCCATCTGTTTCACGGTAGTTGTATTGATCCATGGTTGCGGCTGAACCCTAGCTGCCCTGTTTGTAGAACTTCGCCACTACCGACGCCGATCTCCACCCCTTTGGCGGAGGTCGTTCCGTTGGCCATCGGAAGAAGTTGAAAAAACTGACGTGTAAATATATATTTTTTTTGTTTTTTTTTCCATAGCAATATTATTTTTCTTTCTTTATTTGTTACGTAGAGGT

Coding sequence (CDS)

ATGAACTCCCCCTCGGACTCCGGCGGCGGCGACATCGGTAGTTTCCCCTTCATCGTCGGAATTTCAGTCGGAATCCTCTTCCTCCTCACAACCCTTACAATCACTACCTATTTATGTACCAGAACCACCGTTCCGCAGCCGAATCGCCGTCTCCAGCAGGAGGGACGGCGGGATTTCGTCGTGGATTTTGTACAGGGGCTAGAAGATGAGGTTATTAATGGATATCCGAAGATTCTGTACTCGGAGGCGAAATTGGAAAGGAAATTGGAGTCCGCCGCCGCGAATGGTTGTTCGATTTGTTTGGTGGATTATAAAGACGACGACGTTTTGCGGTTGTTGCCAGACTGTGGCCATCTGTTTCACGGTAGTTGTATTGATCCATGGTTGCGGCTGAACCCTAGCTGCCCTGTTTGTAGAACTTCGCCACTACCGACGCCGATCTCCACCCCTTTGGCGGAGGTCGTTCCGTTGGCCATCGGAAGAAGTTGA

Protein sequence

MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFVVDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS

Homology

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BLAST of MELO3C009554 vs. NCBI nr
Match: KAA0043799.1 (RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK25334.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa])

HSP 1 Score: 332.4 bits (851), Expect = 2.2e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60
           MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV
Sbjct: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60

Query: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120
           VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS
Sbjct: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 162

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BLAST of MELO3C009554 vs. NCBI nr
Match: KGN59365.2 (hypothetical protein Csa_002562 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 147/162 (90.74%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60
           MNS  DSGGGDIG FP+I+GISVGILFLLTTLTITTYLCTRTTVP PNRRL Q GRRDFV
Sbjct: 1   MNSSPDSGGGDIGGFPYILGISVGILFLLTTLTITTYLCTRTTVPPPNRRLPQGGRRDFV 60

Query: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120
           VDFVQGLEDEVINGYPKILYSEAKLERKLESAA NGCSICLVDYKDDDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAATNGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           H  CIDPWLRLNPSCPVCRTSP+PTPISTPLAEV+PLA+GR+
Sbjct: 121 HCGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVIPLAVGRN 162

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BLAST of MELO3C009554 vs. NCBI nr
Match: XP_022935317.1 (RING-H2 finger protein ATL70-like [Cucurbita moschata])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 128/166 (77.11%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MNSPSDSGG----GDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGR 60
           MN+ + SGG    G++G+FP+IVGISVG+LFLLTT+TI TYLCTRTTVPQPNRR +   R
Sbjct: 1   MNNSTGSGGSDATGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDC 120
           RD +VDF  GLEDE IN YPKILYSE KLE KLESAAA+GCSICL DYK++DVLRLLPDC
Sbjct: 61  RDAIVDFGPGLEDEAINEYPKILYSEKKLEGKLESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           GH+FH  CIDPWLRLNPSCPVCRTSP+PTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

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BLAST of MELO3C009554 vs. NCBI nr
Match: XP_023528902.1 (RING-H2 finger protein ATL70 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.1 bits (671), Expect = 1.6e-66
Identity = 127/166 (76.51%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MNSPSDSGG----GDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGR 60
           MN+ + SGG    G++G+FP+IVGISVG+LFLLTT+TI TYLCTRTTVPQPNRR +   R
Sbjct: 1   MNNSTGSGGSDASGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDC 120
           RD +VDF  GLEDE IN YPKILYSE KLE K+ESAAA+GCSICL DYK++DVLRLLPDC
Sbjct: 61  RDVIVDFGPGLEDEAINEYPKILYSEKKLEGKMESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           GH+FH  CIDPWLRLNPSCPVCRTSP+PTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

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BLAST of MELO3C009554 vs. NCBI nr
Match: KAG6580759.1 (putative RING-H2 finger protein ATL71, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017512.1 putative RING-H2 finger protein ATL71, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 3.6e-66
Identity = 127/165 (76.97%), Postives = 143/165 (86.67%), Query Frame = 0


Query: 1   MNSPSDSGG----GDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGR 60
           MN+ + SGG    G++G+FP+IVGISVG+LFLLTT+TI TYLCTRTTVPQPNRR +   R
Sbjct: 1   MNNSTGSGGSDATGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDC 120
           RD +VDF  GLEDE IN YPKILYSE KLE KLESAAA+GCSICL DYK++DVLRLLPDC
Sbjct: 61  RDVIVDFGPGLEDEAINEYPKILYSEKKLEGKLESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGR 162
           GH+FH  CIDPWLRLNPSCPVCRTSP+PTP+STPLAEVVPLA GR
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGR 165

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BLAST of MELO3C009554 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.4e-42
Identity = 85/157 (54.14%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 8   GGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRR------DFVV 67
           G  DIG F + +G+S+G+L L+TT+T+T+Y CTR  +     +  Q+  R        ++
Sbjct: 57  GTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVII 116

Query: 68  DFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLFH 127
           D V GL+++ I  YPKILYSEAK         A+ C+ICL DYK   +LR LPDC HLFH
Sbjct: 117 DVVPGLDEDTIQSYPKILYSEAK-----GPTTASCCAICLGDYKGKHLLRQLPDCNHLFH 176

Query: 128 GSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLA 159
             CID WLRLNP+CPVCRTSPLPTP+STPLAEVVPLA
Sbjct: 177 LKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLA 208

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BLAST of MELO3C009554 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.6e-39
Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 12  IGSFPFIVGISVGILFLLTTLTITTYLCTR-------TTVPQPNRRLQ------------ 71
           +G   + +G+S+GIL L+TT+T+T+Y CTR       TT P+  RR +            
Sbjct: 20  MGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQER 79

Query: 72  ---QEGRRDFVVDFVQGLEDEVINGYPKILYSEAKLERKL--ESAAANGCSICLVDYKDD 131
              ++   D VV  V GL +EVI G+PK+ Y EA++   L  ES+  + CSICL DYK  
Sbjct: 80  FDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKM 139

Query: 132 DVLRLLPDCGHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLA 159
           D++R+LPDC HLFH +C+DPWLRL+P+CPVCRTSPLP+P  TP+A+VVP +
Sbjct: 140 DMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFS 190

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BLAST of MELO3C009554 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 15  FPFIVGISVGILFLLTTLTITTYLCTR------TTVPQPNRR-----------LQQEGRR 74
           F + + I++G L LL+T+ +++Y+C R      T V     R           + +E   
Sbjct: 35  FGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNE 94

Query: 75  DFVV-DFVQGLEDEVINGYPKILYSEAKLERKLESAAANG---CSICLVDYKDDDVLRLL 134
           D    D V GL+  VIN YPK  +S+       +     G   CSICL +YK+ ++LR++
Sbjct: 95  DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMM 154

Query: 135 PDCGHLFHGSCIDPWLRLNPSCPVCRTSPLP----TPISTPLAEVVPLA 159
           P+C H FH  C+D WL+LN SCPVCR SPLP    TP+STPL+EVVPL+
Sbjct: 155 PECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

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BLAST of MELO3C009554 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.3e-22
Identity = 66/180 (36.67%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 17  FIVGISVGILFLLTTLTITTYLCTRTT---------VPQPNRRLQQEG----RRDFVVD- 76
           + + I++G L L++T+ +++Y+C R +             N      G    R  FV + 
Sbjct: 28  YSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFVAED 87

Query: 77  --------FVQGLEDEVINGYPKILYSEAKLERKLESAAANG------------CSICLV 136
                    V GL+  VIN YPK  ++      K  +A  NG            CSICL 
Sbjct: 88  DDLESGNVVVGGLDHSVINSYPKFHFT------KDITAVVNGDGFHDGEGRETTCSICLC 147

Query: 137 DYKDDDVLRLLPDCGHLFHGSCIDPWLRLNPSCPVCRTSPLP----TPISTPLAEVVPLA 159
           +Y ++++LR++P+C H FH  C+D WL+LN SCPVCR SPLP    TP STPL+EVVPL+
Sbjct: 148 EYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

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BLAST of MELO3C009554 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 58/163 (35.58%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 3   SPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFVVD 62
           SP  SG G      + + I+V IL L++ + + +Y+C R+         + E   D V+D
Sbjct: 5   SPPASGVG----LGYGIAIAVSILVLISFIMLASYICIRS-----KSTGRDEATSDVVLD 64

Query: 63  FVQ-------GLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPD 122
                     GL+  VI  YP+I+  ++   R+L       CSICL DY+  + +R +P+
Sbjct: 65  LPSPAAEVKLGLDRPVIESYPRIVLGDS---RRLPRPNNGPCSICLCDYEAREPVRCIPE 124

Query: 123 CGHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLA 159
           C H FH  C+D WLR + +CP+CR SP P+ ++TPL+++VPLA
Sbjct: 125 CNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

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BLAST of MELO3C009554 vs. ExPASy TrEMBL
Match: A0A5A7TRH5 (RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004730 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.0e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60
           MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV
Sbjct: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60

Query: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120
           VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS
Sbjct: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 162

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BLAST of MELO3C009554 vs. ExPASy TrEMBL
Match: A0A0A0LEU3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782740 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.8e-80
Identity = 148/162 (91.36%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60
           MNS  DSGGGDIG FP+I+GISVGILFLLTTLTITTYLCTRTTVP PNRRL Q GRRDFV
Sbjct: 1   MNSSPDSGGGDIGGFPYILGISVGILFLLTTLTITTYLCTRTTVPPPNRRLPQGGRRDFV 60

Query: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120
           VDFVQGLEDEVINGYPKILYSEAKLERKLESAA NGCSICLVDYKDDDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAATNGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           H  CIDPWLRLNPSCPVCRTSP+PTPISTPLAEV+PLA+GRS
Sbjct: 121 HCGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVIPLAVGRS 162

[Close]

BLAST of MELO3C009554 vs. ExPASy TrEMBL
Match: A0A6J1F576 (RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111442240 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.0e-67
Identity = 128/166 (77.11%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MNSPSDSGG----GDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGR 60
           MN+ + SGG    G++G+FP+IVGISVG+LFLLTT+TI TYLCTRTTVPQPNRR +   R
Sbjct: 1   MNNSTGSGGSDATGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDC 120
           RD +VDF  GLEDE IN YPKILYSE KLE KLESAAA+GCSICL DYK++DVLRLLPDC
Sbjct: 61  RDAIVDFGPGLEDEAINEYPKILYSEKKLEGKLESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           GH+FH  CIDPWLRLNPSCPVCRTSP+PTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

[Close]

BLAST of MELO3C009554 vs. ExPASy TrEMBL
Match: A0A6J1J186 (RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111481769 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 126/166 (75.90%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1   MNSPSDSGG----GDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGR 60
           MN+ + SGG    G++G+FP+IVGISVG+LFLLTT+TI TYLCTRTTVPQ NRR +   R
Sbjct: 1   MNNSTGSGGSDASGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQLNRRRRPGER 60

Query: 61  RDFVVDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDC 120
           RD +VDF  GLEDE IN YPKILYSE KLE K+ESAAA+GCSICL DYK++DVLRLLPDC
Sbjct: 61  RDVIVDFGPGLEDEAINEYPKILYSEKKLEGKMESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 163
           GH+FH  CIDPWLRLNPSCPVCRTSP+PTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

[Close]

BLAST of MELO3C009554 vs. ExPASy TrEMBL
Match: A0A7J8RQQ2 (RING-type domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_015786 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.1e-47
Identity = 102/168 (60.71%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 1   MNSPSDS-----GGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQ--PNRRLQQ 60
           MNS SD+     G  +IG F + +G+SVGIL L+TT+T+ +Y CTRT  PQ  P RR +Q
Sbjct: 1   MNSTSDANDGLLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTQPPQGAPARRTRQ 60

Query: 61  EGRRD---FVVDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVL 120
           E   D   FVVD   GL++E I  YPK+LYSEAKL++K   + A+ CSICL DYK  D+L
Sbjct: 61  EPNIDPDSFVVDL--GLDEETIKSYPKLLYSEAKLQKK--DSTASCCSICLADYKSSDML 120

Query: 121 RLLPDCGHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLA 159
           RLLPDC HLFH  C+DPWLRLNP+CPVCRTSP+PTP+STPLAEVVPL+
Sbjct: 121 RLLPDCNHLFHLKCVDPWLRLNPTCPVCRTSPIPTPLSTPLAEVVPLS 164

[Close]

BLAST of MELO3C009554 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 5.9e-43
Identity = 85/157 (54.14%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 8   GGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRR------DFVV 67
           G  DIG F + +G+S+G+L L+TT+T+T+Y CTR  +     +  Q+  R        ++
Sbjct: 57  GTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVII 116

Query: 68  DFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLFH 127
           D V GL+++ I  YPKILYSEAK         A+ C+ICL DYK   +LR LPDC HLFH
Sbjct: 117 DVVPGLDEDTIQSYPKILYSEAK-----GPTTASCCAICLGDYKGKHLLRQLPDCNHLFH 176

Query: 128 GSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLA 159
             CID WLRLNP+CPVCRTSPLPTP+STPLAEVVPLA
Sbjct: 177 LKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLA 208

[Close]

BLAST of MELO3C009554 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 161.8 bits (408), Expect = 4.7e-40
Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 12  IGSFPFIVGISVGILFLLTTLTITTYLCTR-------TTVPQPNRRLQ------------ 71
           +G   + +G+S+GIL L+TT+T+T+Y CTR       TT P+  RR +            
Sbjct: 20  MGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQER 79

Query: 72  ---QEGRRDFVVDFVQGLEDEVINGYPKILYSEAKLERKL--ESAAANGCSICLVDYKDD 131
              ++   D VV  V GL +EVI G+PK+ Y EA++   L  ES+  + CSICL DYK  
Sbjct: 80  FDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKM 139

Query: 132 DVLRLLPDCGHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLA 159
           D++R+LPDC HLFH +C+DPWLRL+P+CPVCRTSPLP+P  TP+A+VVP +
Sbjct: 140 DMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFS 190

[Close]

BLAST of MELO3C009554 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27
Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 15  FPFIVGISVGILFLLTTLTITTYLCTR------TTVPQPNRR-----------LQQEGRR 74
           F + + I++G L LL+T+ +++Y+C R      T V     R           + +E   
Sbjct: 35  FGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNE 94

Query: 75  DFVV-DFVQGLEDEVINGYPKILYSEAKLERKLESAAANG---CSICLVDYKDDDVLRLL 134
           D    D V GL+  VIN YPK  +S+       +     G   CSICL +YK+ ++LR++
Sbjct: 95  DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMM 154

Query: 135 PDCGHLFHGSCIDPWLRLNPSCPVCRTSPLP----TPISTPLAEVVPLA 159
           P+C H FH  C+D WL+LN SCPVCR SPLP    TP+STPL+EVVPL+
Sbjct: 155 PECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of MELO3C009554 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-23
Identity = 66/180 (36.67%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 17  FIVGISVGILFLLTTLTITTYLCTRTT---------VPQPNRRLQQEG----RRDFVVD- 76
           + + I++G L L++T+ +++Y+C R +             N      G    R  FV + 
Sbjct: 28  YSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFVAED 87

Query: 77  --------FVQGLEDEVINGYPKILYSEAKLERKLESAAANG------------CSICLV 136
                    V GL+  VIN YPK  ++      K  +A  NG            CSICL 
Sbjct: 88  DDLESGNVVVGGLDHSVINSYPKFHFT------KDITAVVNGDGFHDGEGRETTCSICLC 147

Query: 137 DYKDDDVLRLLPDCGHLFHGSCIDPWLRLNPSCPVCRTSPLP----TPISTPLAEVVPLA 159
           +Y ++++LR++P+C H FH  C+D WL+LN SCPVCR SPLP    TP STPL+EVVPL+
Sbjct: 148 EYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]

BLAST of MELO3C009554 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.9e-23
Identity = 58/163 (35.58%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 3   SPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFVVD 62
           SP  SG G      + + I+V IL L++ + + +Y+C R+         + E   D V+D
Sbjct: 5   SPPASGVG----LGYGIAIAVSILVLISFIMLASYICIRS-----KSTGRDEATSDVVLD 64

Query: 63  FVQ-------GLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPD 122
                     GL+  VI  YP+I+  ++   R+L       CSICL DY+  + +R +P+
Sbjct: 65  LPSPAAEVKLGLDRPVIESYPRIVLGDS---RRLPRPNNGPCSICLCDYEAREPVRCIPE 124

Query: 123 CGHLFHGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLA 159
           C H FH  C+D WLR + +CP+CR SP P+ ++TPL+++VPLA
Sbjct: 125 CNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

The following BLAST results are available for this feature:

BLAST of MELO3C009554 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043799.1	2.2e-87	100.00	RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK25334.1 RING-H2...	[more]
KGN59365.2	1.3e-79	90.74	hypothetical protein Csa_002562 [Cucumis sativus]	[more]
XP_022935317.1	1.2e-66	77.11	RING-H2 finger protein ATL70-like [Cucurbita moschata]	[more]
XP_023528902.1	1.6e-66	76.51	RING-H2 finger protein ATL70 [Cucurbita pepo subsp. pepo]	[more]
KAG6580759.1	3.6e-66	76.97	putative RING-H2 finger protein ATL71, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of MELO3C009554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX29	8.4e-42	54.14	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FG21	6.6e-39	47.37	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
O82353	2.2e-26	40.24	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9M313	4.3e-22	36.67	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]
Q9FL42	1.3e-21	35.58	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]

BLAST of MELO3C009554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRH5	1.0e-87	100.00	RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LEU3	2.8e-80	91.36	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782740 P...	[more]
A0A6J1F576	6.0e-67	77.11	RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111442240 ...	[more]
A0A6J1J186	1.1e-65	75.90	RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111481769 PE...	[more]
A0A7J8RQQ2	3.1e-47	60.71	RING-type domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_01...	[more]

BLAST of MELO3C009554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35910.1	5.9e-43	54.14	RING/U-box superfamily protein	[more]
AT5G06490.1	4.7e-40	47.37	RING/U-box superfamily protein	[more]
AT2G46160.1	1.6e-27	40.24	RING/U-box superfamily protein	[more]
AT3G61550.1	3.1e-23	36.67	RING/U-box superfamily protein	[more]
AT5G07040.1	8.9e-23	35.58	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 97..138 e-value: 1.4E-7 score: 41.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 97..139 e-value: 2.3E-14 score: 53.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 97..139 score: 12.784338
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 60..143 e-value: 6.2E-21 score: 75.9
None	No IPR available	PANTHER	PTHR46719	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 10..160
None	No IPR available	PANTHER	PTHR46719:SF7	RING-H2 FINGER PROTEIN ATL71-RELATED	coord: 10..160
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 97..139 e-value: 2.95874E-21 score: 79.2681
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 71..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009554.1	MELO3C009554.1	mRNA