MELO3C009274 (gene) Melon (DHL92) v4

Overview
NameMELO3C009274
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr04: 31982362 .. 31982977 (+)
RNA-Seq ExpressionMELO3C009274
SyntenyMELO3C009274
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACAAACCAAATTAAAACGTACAAAAAAAGAGAGAAAAAAGAAAAAGCAGTCAACTCTACCGTTACGCCGGCGAACTCTCACTATTTCTCCCCCCCTTTCTTCTTCTTCTCCATTCCCAAATCTCACCGTAAAATCAAAATGTCGCAGAGACCCGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGGCCGCCGATTACCTCTCCGAACCCCCTCCACCGCCGGTTATTGGACCGGGATCCACGGTCGAATCTGGTGGTCCGCACTCGGCTCTTCTTACTCGACCACCCCAGCAGAGCCGCAACGCTGATCCGGTAGCCCCAAGGCCTCCTGCTCCGGCCGCGGCGAATGATGCTCAGAATCCGGCGAGCTAGCGGGACCCGAGACTCGACGATGTCGTTTTCTTCGATGATGTGGAATCAGGTTTTTCGTTTTCGATCTGTCGTTTCGTTCCTTTTTTAATTTGCTGTTAAATCTCAGTTTTCATTCGTGAATTTAAAAAACGAAGAAGAAGAAGAAGAAGAAGAAAAATAATATCTCATTTCCTTTTCTATTTCCTGACTATTTTTCTTCATCTTTACCATTCTTTTATATTAGTTTTCTTTTGGT

mRNA sequence

CAAACAAACCAAATTAAAACGTACAAAAAAAGAGAGAAAAAAGAAAAAGCAGTCAACTCTACCGTTACGCCGGCGAACTCTCACTATTTCTCCCCCCCTTTCTTCTTCTTCTCCATTCCCAAATCTCACCGTAAAATCAAAATGTCGCAGAGACCCGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGGCCGCCGATTACCTCTCCGAACCCCCTCCACCGCCGGTTATTGGACCGGGATCCACGGTCGAATCTGGTGGTCCGCACTCGGCTCTTCTTACTCGACCACCCCAGCAGAGCCGCAACGCTGATCCGGTAGCCCCAAGGCCTCCTGCTCCGGCCGCGGCGAATGATGCTCAGAATCCGGCGAGCTAGCGGGACCCGAGACTCGACGATGTCGTTTTCTTCGATGATGTGGAATCAGGTTTTTCGTTTTCGATCTGTCGTTTCGTTCCTTTTTTAATTTGCTGTTAAATCTCAGTTTTCATTCGTGAATTTAAAAAACGAAGAAGAAGAAGAAGAAGAAGAAAAATAATATCTCATTTCCTTTTCTATTTCCTGACTATTTTTCTTCATCTTTACCATTCTTTTATATTAGTTTTCTTTTGGT

Coding sequence (CDS)

CAAACAAACCAAATTAAAACGTACAAAAAAAGAGAGAAAAAAGAAAAAGCAGTCAACTCTACCGTTACGCCGGCGAACTCTCACTATTTCTCCCCCCCTTTCTTCTTCTTCTCCATTCCCAAATCTCACCGTAAAATCAAAATGTCGCAGAGACCCGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGGCCGCCGATTACCTCTCCGAACCCCCTCCACCGCCGGTTATTGGACCGGGATCCACGGTCGAATCTGGTGGTCCGCACTCGGCTCTTCTTACTCGACCACCCCAGCAGAGCCGCAACGCTGATCCGGTAGCCCCAAGGCCTCCTGCTCCGGCCGCGGCGAATGATGCTCAGAATCCGGCGAGCTAG

Protein sequence

QTNQIKTYKKREKKEKAVNSTVTPANSHYFSPPFFFFSIPKSHRKIKMSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADPVAPRPPAPAAANDAQNPAS
Homology
BLAST of MELO3C009274 vs. NCBI nr
Match: KAA0044076.1 (hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa] >TYK25061.1 hypothetical protein E5676_scaffold352G001830 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 9.7e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 48  MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP 107
           MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP
Sbjct: 1   MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP 60

Query: 108 VAPRPPAPAAANDAQNPAS 127
           VAPRPPAPAAANDAQNPAS
Sbjct: 61  VAPRPPAPAAANDAQNPAS 79

BLAST of MELO3C009274 vs. NCBI nr
Match: KGN58888.1 (hypothetical protein Csa_002334 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 6.5e-23
Identity = 66/82 (80.49%), Postives = 70/82 (85.37%), Query Frame = 0

Query: 48  MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSA-LLTRPPQQSRNAD 107
           MSQRP RHQRRPSQGVFM ADYLS+PPPP  +GPGSTVESGGPHS+ LLTRP QQSR+AD
Sbjct: 1   MSQRPSRHQRRPSQGVFMPADYLSDPPPP--VGPGSTVESGGPHSSTLLTRPTQQSRSAD 60

Query: 108 PVAPRPPAPAAA--NDAQNPAS 127
           PVA RPPAP A   NDA NPAS
Sbjct: 61  PVAARPPAPPAVANNDAPNPAS 80

BLAST of MELO3C009274 vs. NCBI nr
Match: KAG6580559.1 (hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21
Identity = 60/79 (75.95%), Postives = 64/79 (81.01%), Query Frame = 0

Query: 48  MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP 107
           MSQR GRHQRRPSQ VF+AADYLSE  PP   GPGS VE  GPHSA L RPPQQSRNADP
Sbjct: 1   MSQRQGRHQRRPSQSVFIAADYLSE--PPRATGPGSAVEHAGPHSAHLPRPPQQSRNADP 60

Query: 108 VAPRPPAPAAANDAQNPAS 127
            APRPPAPAA+N+A NP +
Sbjct: 61  AAPRPPAPAASNEAPNPTN 77

BLAST of MELO3C009274 vs. NCBI nr
Match: KAG6596419.1 (hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18
Identity = 57/79 (72.15%), Postives = 61/79 (77.22%), Query Frame = 0

Query: 48  MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP 107
           MSQR GRHQRRPSQGVFM ADYLSEPPPP   GP   VES  P S+ L+RPP QSR ADP
Sbjct: 1   MSQRSGRHQRRPSQGVFMTADYLSEPPPP--TGPPLPVESVDPQSSFLSRPPPQSRYADP 60

Query: 108 VAPRPPAPAAANDAQNPAS 127
            A RPPAPA +N+A NPAS
Sbjct: 61  PAARPPAPAVSNEAPNPAS 77

BLAST of MELO3C009274 vs. ExPASy TrEMBL
Match: A0A5A7TPQ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001830 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.7e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 48  MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP 107
           MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP
Sbjct: 1   MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSALLTRPPQQSRNADP 60

Query: 108 VAPRPPAPAAANDAQNPAS 127
           VAPRPPAPAAANDAQNPAS
Sbjct: 61  VAPRPPAPAAANDAQNPAS 79

BLAST of MELO3C009274 vs. ExPASy TrEMBL
Match: A0A0A0LAM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734895 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.2e-23
Identity = 66/82 (80.49%), Postives = 70/82 (85.37%), Query Frame = 0

Query: 48  MSQRPGRHQRRPSQGVFMAADYLSEPPPPPVIGPGSTVESGGPHSA-LLTRPPQQSRNAD 107
           MSQRP RHQRRPSQGVFM ADYLS+PPPP  +GPGSTVESGGPHS+ LLTRP QQSR+AD
Sbjct: 1   MSQRPSRHQRRPSQGVFMPADYLSDPPPP--VGPGSTVESGGPHSSTLLTRPTQQSRSAD 60

Query: 108 PVAPRPPAPAAA--NDAQNPAS 127
           PVA RPPAP A   NDA NPAS
Sbjct: 61  PVAARPPAPPAVANNDAPNPAS 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0044076.19.7e-35100.00hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa] >TYK250... [more]
KGN58888.16.5e-2380.49hypothetical protein Csa_002334 [Cucumis sativus][more]
KAG6580559.11.2e-2175.95hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6596419.11.7e-1872.15hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TPQ14.7e-35100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LAM03.2e-2380.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734895 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009274.1MELO3C009274.1mRNA