MELO3C009197 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACACACAAACTTCTGTTTTTCCTTTTCTGTTGGCTGGCTGCTTCAGACCTCTCTGTTTCTGTTTCTTTAGGGTATTTTTGAAATCAAGATCCTCTCTTTTCAATTCTTTTGATGGGTTCCTCCGATCGTTTATTTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGGTATGTTAAGATCTTCTCATTTCTGGGTTTTTTTTCCTTGATGGATCCTTTTAAATGTCTTTTGGATTGCTCTATTTCGGTTCTCTATTGATTTTGCTATTGAATTTCGTAGCAGTGATGGGAAAATTTTAATCCTTGAATTATTTTCTTCTTTTCTTCATCGCAAATGAAATTCTTGCTGTGGATTCTGCTTTTCACTGCAGCTGCTAGAGTTCTAGGATCCATTTCTTTTGCTATAAAATCACTAAGGATTTGATTTAACTGTCGAGTGTTTAATCTGTTCAGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGCGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGGTAACTAATCGGAAATTGCCTCTTGACTTGCTATCTCTTCAATTTGAATATCAACGATGAATGGTAAACTGATATATAAGTTTGAGAATGCATTTTCTTTAATAGATAAAGAGGCATTTCCCTATTGGATTTGACAATGGTCTTGAATAATGATTAGGTCCGGTTTCAAATTCTCTAGATTTTCAACTACTTAATCTGATAATTTGTCCTCGCTTTCTTTTACATTTGACGAACATTTTGGGATTTTTACTTCCTTAAGTTTCATTCACTTAGTAATATTATGAGATATGTACATGCATTTGGGAAAGATGATGAACCTGATTGAGTGTGAGACAATAGTTAGATCTTCACATGTTCTTTTGAGCGTAATAAGCTTAGAGATGAAACAACTCAGTAGTTTTCGAGCATTCAAATACTTATCAATTAAAAATATAGTGTTTAGTTTTTGTTCCACTGCTCTCTCTTAAATTTCTCTGTCTTTCCAGGTTTCCTTAGTTCCATAATAATCAAATGTAGCTTAACTTCTAAGTACTTGGATTAAGGTTACTTCTAAATCTGTTACTTTTCTTCCTGAGCAGACCAGCGCCTCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCATGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAGGACCCCAAATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCTGTTATCAGTGGCTTGACTGATATTATTACTTTGGGTTACACCAGTAAGTTTTCAATCTTCAGTTTCCATAATTGGACGATGATCAATGGGTTTCATAGACATTTTTTCTCTCGATGACAGGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAAAAGTATGAAGATTATGTAGATAAACATGCCATATTGATGTACAGAAAATTGTATCAGTTCTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGATCAGCAATCTTTCTTGTTCATGGCTTCCTCTCTCTCTCTCTCTGTCTCTCTCGCTCTTTCTTCTTGTTCCATTTTGGATGTGTTTATGGGGTTCTTTCAACCCACTTTGGCTAATGGCTAGCACCTCATGAGTGACAGAAGTGTGAGAGAAATGATCGTATTTTGTTCATAACTTTGTTTTCATTCTCTGATTGCTGCTAGAGAAATGTATTTAGAAACGGCATATTAAGAATTTTGAATCTTTTTCTTTCCCAATTGGGTGATTGGGGGTTTACAGGCAAGTCGATATATTTATTATATATATGCAGCCTTAACAGCAGCAACTATAATTGATGTTTCCTTGCCATCCTATGCTCTAGGTTGTTTCATTGTGATTGTGAATGATGGTAAATACAATTTGTATCTCCAAGTTTTTTAATATCAAATAATGATT AAACACACAAACTTCTGTTTTTCCTTTTCTGTTGGCTGGCTGCTTCAGACCTCTCTGTTTCTGTTTCTTTAGGGTATTTTTGAAATCAAGATCCTCTCTTTTCAATTCTTTTGATGGGTTCCTCCGATCGTTTATTTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGCGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCTCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCATGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAGGACCCCAAATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCTGTTATCAGTGGCTTGACTGATATTATTACTTTGGGTTACACCAGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAAAAGTATGAAGATTATGTAGATAAACATGCCATATTGATGTACAGAAAATTGTATCAGTTCTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGATCAGCAATCTTTCTTGTTCATGGCTTCCTCTCTCTCTCTCTCTGTCTCTCTCGCTCTTTCTTCTTGTTCCATTTTGGATGTGTTTATGGGGTTCTTTCAACCCACTTTGGCTAATGGCTAGCACCTCATGAGTGACAGAAGTGTGAGAGAAATGATCGTATTTTGTTCATAACTTTGTTTTCATTCTCTGATTGCTGCTAGAGAAATGTATTTAGAAACGGCATATTAAGAATTTTGAATCTTTTTCTTTCCCAATTGGGTGATTGGGGGTTTACAGGCAAGTCGATATATTTATTATATATATGCAGCCTTAACAGCAGCAACTATAATTGATGTTTCCTTGCCATCCTATGCTCTAGGTTGTTTCATTGTGATTGTGAATGATGGTAAATACAATTTGTATCTCCAAGTTTTTTAATATCAAATAATGATT ATGGGTTCCTCCGATCGTTTATTTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGCGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCTCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCATGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAGGACCCCAAATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCTGTTATCAGTGGCTTGACTGATATTATTACTTTGGGTTACACCAGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAAAAGTATGAAGATTATGTAGATAAACATGCCATATTGATGTACAGAAAATTGTATCAGTTCTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDEMRVLTYQQWILEKEKLS Homology
BLAST of MELO3C009197 vs. NCBI nr
Match: XP_008442476.1 (PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of MELO3C009197 vs. NCBI nr
Match: KAA0044144.1 (reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106 Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0
BLAST of MELO3C009197 vs. NCBI nr
Match: XP_016899688.1 (PREDICTED: reticulon-like protein B12 isoform X2 [Cucumis melo]) HSP 1 Score: 391.3 bits (1004), Expect = 5.1e-105 Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of MELO3C009197 vs. NCBI nr
Match: XP_038904646.1 (reticulon-like protein B12 [Benincasa hispida]) HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102 Identity = 199/209 (95.22%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of MELO3C009197 vs. NCBI nr
Match: XP_004137740.1 (reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Csa_001500 [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 4.0e-102 Identity = 198/209 (94.74%), Postives = 204/209 (97.61%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy Swiss-Prot
Match: Q9M392 (Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 3.2e-54 Identity = 107/189 (56.61%), Postives = 148/189 (78.31%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.5e-39 Identity = 92/206 (44.66%), Postives = 133/206 (64.56%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34 Identity = 71/162 (43.83%), Postives = 111/162 (68.52%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 7.8e-32 Identity = 70/187 (37.43%), Postives = 118/187 (63.10%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.0e-31 Identity = 70/186 (37.63%), Postives = 117/186 (62.90%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy TrEMBL
Match: A0A5D3DMY4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001110 PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 9.0e-108 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy TrEMBL
Match: A0A1S3B6E8 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 9.0e-108 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy TrEMBL
Match: A0A5A7TLS2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004970 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106 Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy TrEMBL
Match: A0A1S4DUP5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105 Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of MELO3C009197 vs. ExPASy TrEMBL
Match: A0A0A0LFE7 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102 Identity = 198/209 (94.74%), Postives = 204/209 (97.61%), Query Frame = 0
BLAST of MELO3C009197 vs. TAIR 10
Match: AT3G54120.1 (Reticulon family protein ) HSP 1 Score: 213.0 bits (541), Expect = 2.3e-55 Identity = 107/189 (56.61%), Postives = 148/189 (78.31%), Query Frame = 0
BLAST of MELO3C009197 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein ) HSP 1 Score: 162.2 bits (409), Expect = 4.7e-40 Identity = 92/206 (44.66%), Postives = 133/206 (64.56%), Query Frame = 0
BLAST of MELO3C009197 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein ) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38 Identity = 92/207 (44.44%), Postives = 133/207 (64.25%), Query Frame = 0
BLAST of MELO3C009197 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein ) HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35 Identity = 93/229 (40.61%), Postives = 134/229 (58.52%), Query Frame = 0
BLAST of MELO3C009197 vs. TAIR 10
Match: AT3G19460.1 (Reticulon family protein ) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35 Identity = 71/162 (43.83%), Postives = 111/162 (68.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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