MELO3C009080 (gene) Melon (DHL92) v4

Overview
NameMELO3C009080
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionWall-associated receptor kinase 2-like
Locationchr08: 18317466 .. 18317813 (-)
RNA-Seq ExpressionMELO3C009080
SyntenyMELO3C009080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAATTACCAAAATCCGGTGACGTTGGGTAAGCTTTTCAAGTGGGACTGTGGCAGCGCAGGGGTTGTGATCAGTTATGAAGATTTGGCGAATTCGACGTTCTTCGGCGGAGGGGTCGTGGTTGCGTTCTTCAACGAACGGGTCGTGGGTCGTGGGTCAATGGCATTCTTCGAGTTCTTCAGCGGAGGGGTCGTGGTTCTTCGAGTTCTTCGATGGAGGGGTCGTGGGTCGTGGGTCGACGACGTTCTTCGATGGAGGGGTAGGTCGGCACAACGTTGGGTCATCAGTTGCTGCGAGAGAGATGGGAGTGTGGGGGCGCGCGAGGGAGAAGGTGTCGTTGGGTGA

mRNA sequence

ATGATAAATTACCAAAATCCGGTGACGTTGGGTAAGCTTTTCAAGTGGGACTGTGGCAGCGCAGGGGTTGTGATCAGTTATGAAGATTTGGCGAATTCGACGTTCTTCGGCGGAGGGGTCGTGGTTGCGTTCTTCAACGAACGGGTCGTGGGTCGTGGGTCAATGGCATTCTTCGAGTTCTTCAGCGGAGGGGTCGTGGTTCTTCGAGTTCTTCGATGGAGGGGTCGTGGGTCGTGGGTCGACGACGTTCTTCGATGGAGGGGTAGGTCGGCACAACGTTGGGTCATCAGTTGCTGCGAGAGAGATGGGAGTGTGGGGGCGCGCGAGGGAGAAGGTGTCGTTGGGTGA

Coding sequence (CDS)

ATGATAAATTACCAAAATCCGGTGACGTTGGGTAAGCTTTTCAAGTGGGACTGTGGCAGCGCAGGGGTTGTGATCAGTTATGAAGATTTGGCGAATTCGACGTTCTTCGGCGGAGGGGTCGTGGTTGCGTTCTTCAACGAACGGGTCGTGGGTCGTGGGTCAATGGCATTCTTCGAGTTCTTCAGCGGAGGGGTCGTGGTTCTTCGAGTTCTTCGATGGAGGGGTCGTGGGTCGTGGGTCGACGACGTTCTTCGATGGAGGGGTAGGTCGGCACAACGTTGGGTCATCAGTTGCTGCGAGAGAGATGGGAGTGTGGGGGCGCGCGAGGGAGAAGGTGTCGTTGGGTGA

Protein sequence

MINYQNPVTLGKLFKWDCGSAGVVISYEDLANSTFFGGGVVVAFFNERVVGRGSMAFFEFFSGGVVVLRVLRWRGRGSWVDDVLRWRGRSAQRWVISCCERDGSVGAREGEGVVG
Homology
[Close]
BLAST of MELO3C009080 vs. NCBI nr
Match: KAA0035783.1 (wall-associated receptor kinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 194.9 bits (494), Expect = 3.8e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 22  GVVISYEDLANSTFFGGGVVVAFFNERVVGRGSMAFFEFFSGGVVVLRVLRWRGRGSWVD 81
           GVVISYEDLANSTFFGGGVVVAFFNERVVGRGSMAFFEFFSGGVVVLRVLRWRGRGSWVD
Sbjct: 9   GVVISYEDLANSTFFGGGVVVAFFNERVVGRGSMAFFEFFSGGVVVLRVLRWRGRGSWVD 68

Query: 82  DVLRWRGRSAQRWVISCCERDGSVGAREGEGVVG 116
           DVLRWRGRSAQRWVISCCERDGSVGAREGEGVVG
Sbjct: 69  DVLRWRGRSAQRWVISCCERDGSVGAREGEGVVG 102

[Close]
BLAST of MELO3C009080 vs. NCBI nr
Match: KAA0059843.1 (wall-associated receptor kinase 2-like [Cucumis melo var. makuwa] >TYK24797.1 wall-associated receptor kinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 4.6e-07
Identity = 40/71 (56.34%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 55  MAFFEFFSGGVVVLRVL-RWRGRGSWVDDVLRWRGRSAQR-----------WVISCCERD 113
           M FFEFF GGVVVLRVL R+    SWVDDVLR RG SA+R           W +  CERD
Sbjct: 1   MTFFEFFDGGVVVLRVLWRYLAEESWVDDVLRRRGSSAERFFAGGVFGSAAWGMDLCERD 60

[Close]
BLAST of MELO3C009080 vs. ExPASy TrEMBL
Match: A0A5A7SYU3 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00680 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 22  GVVISYEDLANSTFFGGGVVVAFFNERVVGRGSMAFFEFFSGGVVVLRVLRWRGRGSWVD 81
           GVVISYEDLANSTFFGGGVVVAFFNERVVGRGSMAFFEFFSGGVVVLRVLRWRGRGSWVD
Sbjct: 9   GVVISYEDLANSTFFGGGVVVAFFNERVVGRGSMAFFEFFSGGVVVLRVLRWRGRGSWVD 68

Query: 82  DVLRWRGRSAQRWVISCCERDGSVGAREGEGVVG 116
           DVLRWRGRSAQRWVISCCERDGSVGAREGEGVVG
Sbjct: 69  DVLRWRGRSAQRWVISCCERDGSVGAREGEGVVG 102

[Close]
BLAST of MELO3C009080 vs. ExPASy TrEMBL
Match: A0A5D3DME3 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00450 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-07
Identity = 40/71 (56.34%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 55  MAFFEFFSGGVVVLRVL-RWRGRGSWVDDVLRWRGRSAQR-----------WVISCCERD 113
           M FFEFF GGVVVLRVL R+    SWVDDVLR RG SA+R           W +  CERD
Sbjct: 1   MTFFEFFDGGVVVLRVLWRYLAEESWVDDVLRRRGSSAERFFAGGVFGSAAWGMDLCERD 60

The following BLAST results are available for this feature:
BLAST of MELO3C009080 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035783.13.8e-46100.00wall-associated receptor kinase 2-like [Cucumis melo var. makuwa][more]
KAA0059843.14.6e-0756.34wall-associated receptor kinase 2-like [Cucumis melo var. makuwa] >TYK24797.1 wa... [more]
BLAST of MELO3C009080 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C009080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SYU31.9e-46100.00Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3DME32.2e-0756.34Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
BLAST of MELO3C009080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009080.1MELO3C009080.1mRNA