MELO3C009054 (gene) Melon (DHL92) v4

Overview
NameMELO3C009054
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionStress response protein NST1-like
Locationchr08: 18869103 .. 18869513 (-)
RNA-Seq ExpressionMELO3C009054
SyntenyMELO3C009054
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTGGACCTGAATAAGCAGGTAGAGAGTGTGGTTACGAGGAATAAGGCAGTTGAGCATCAAGAGGTTGACCATTTGAGGTACGATTTTAGGTACCTAGTCGCATCATCAAGAGGTCAACCATTTAGAGGAGGTAAGGTAAGAGGTCATTTGGGGTACGATTTTAGATACCTAGTATGATTTCAGGTACAAGGTCAACCATTGAAGGATGAATCATAAGTGATTATGGAAGGCGAGAAGGTGCTTTTCACCACAAAGGAGATTGATGATTTATATGATTTACCAAATGATCCAGATGTGTACCCTGGTCAAAGGCTCATCGCAGACCCTAGAGAAAGAGACTCGAAAAAGATAATCAAACTAATCGCATGGCTAGTGGCGAATTGGATGAGAATGCCAACTGGGTGA

mRNA sequence

ATGGTCGTGGACCTGAATAAGCAGGTAGAGAGTGTGGTTACGAGGAATAAGGCAGTTGAGCATCAAGAGGTTGACCATTTGAGGTACGATTTTAGGTACCTAGTCGCATCATCAAGAGGTCAACCATTTAGAGGAGGCGAGAAGGTGCTTTTCACCACAAAGGAGATTGATGATTTATATGATTTACCAAATGATCCAGATGTGTACCCTGGTCAAAGGCTCATCGCAGACCCTAGAGAAAGAGACTCGAAAAAGATAATCAAACTAATCGCATGGCTAGTGGCGAATTGGATGAGAATGCCAACTGGGTGA

Coding sequence (CDS)

ATGGTCGTGGACCTGAATAAGCAGGTAGAGAGTGTGGTTACGAGGAATAAGGCAGTTGAGCATCAAGAGGTTGACCATTTGAGGTACGATTTTAGGTACCTAGTCGCATCATCAAGAGGTCAACCATTTAGAGGAGGCGAGAAGGTGCTTTTCACCACAAAGGAGATTGATGATTTATATGATTTACCAAATGATCCAGATGTGTACCCTGGTCAAAGGCTCATCGCAGACCCTAGAGAAAGAGACTCGAAAAAGATAATCAAACTAATCGCATGGCTAGTGGCGAATTGGATGAGAATGCCAACTGGGTGA

Protein sequence

MVVDLNKQVESVVTRNKAVEHQEVDHLRYDFRYLVASSRGQPFRGGEKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPTG
Homology
[Close]
BLAST of MELO3C009054 vs. NCBI nr
Match: KAA0062902.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 8   QVESVVTRNKAVEHQEVDHLRYDFRYLVASSRGQPFRG----GEKVLFTTKEIDDLYDLP 67
           +VESVVTRNKAVEHQEVDHLRYDFRYLVASSRGQPFRG    GEKVLFTTKEIDDLYDLP
Sbjct: 72  EVESVVTRNKAVEHQEVDHLRYDFRYLVASSRGQPFRGVIMEGEKVLFTTKEIDDLYDLP 131

Query: 68  NDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPTG 104
           NDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPTG
Sbjct: 132 NDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPTG 171

[Close]
BLAST of MELO3C009054 vs. NCBI nr
Match: KAA0040553.1 (hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK05596.1 hypothetical protein E5676_scaffold98G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0 

Query: 46  GEKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 103
           GEKV    +EI+DLYDLPNDP+VYPGQR+ ADPRE D+K IIKLIAW   +W+RMPT
Sbjct: 86  GEKVPLIVEEINDLYDLPNDPNVYPGQRINADPREGDAKNIIKLIAWPGVDWIRMPT 142

[Close]
BLAST of MELO3C009054 vs. NCBI nr
Match: KAA0045335.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 4.5e-14
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0 

Query: 43  FRGGEKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 102
           F   +KV FT +EI++LYDLPN  D YPGQRLIADPRE D+KKIIKLI WL A+W   PT
Sbjct: 151 FMDEKKVPFTVEEINELYDLPNGLDAYPGQRLIADPREGDTKKIIKLIVWLGADWTITPT 210

Query: 103 G 104
           G
Sbjct: 211 G 211

[Close]
BLAST of MELO3C009054 vs. NCBI nr
Match: KAA0041156.1 (hypothetical protein E6C27_scaffold128G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-11
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0 

Query: 46  GEKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 103
           G+KV FT +EI+DLYDL ND D YPGQRLIA+PR+ ++  IIKLIAW    WM  PT
Sbjct: 99  GKKVSFTVEEINDLYDLANDSDAYPGQRLIANPRKGNANNIIKLIAWPGVAWMITPT 155

[Close]
BLAST of MELO3C009054 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 2.3e-10
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 0 

Query: 47   EKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 103
            EKV FTT+EI++LYDLPND   YPGQRLI D RE D+KKIIKLI W  A+    PT
Sbjct: 1230 EKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPT 1285

[Close]
BLAST of MELO3C009054 vs. ExPASy TrEMBL
Match: A0A5A7V3T5 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00100 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 8   QVESVVTRNKAVEHQEVDHLRYDFRYLVASSRGQPFRG----GEKVLFTTKEIDDLYDLP 67
           +VESVVTRNKAVEHQEVDHLRYDFRYLVASSRGQPFRG    GEKVLFTTKEIDDLYDLP
Sbjct: 72  EVESVVTRNKAVEHQEVDHLRYDFRYLVASSRGQPFRGVIMEGEKVLFTTKEIDDLYDLP 131

Query: 68  NDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPTG 104
           NDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPTG
Sbjct: 132 NDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPTG 171

[Close]
BLAST of MELO3C009054 vs. ExPASy TrEMBL
Match: A0A5D3C5D1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00460 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.5e-15
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0 

Query: 46  GEKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 103
           GEKV    +EI+DLYDLPNDP+VYPGQR+ ADPRE D+K IIKLIAW   +W+RMPT
Sbjct: 86  GEKVPLIVEEINDLYDLPNDPNVYPGQRINADPREGDAKNIIKLIAWPGVDWIRMPT 142

[Close]
BLAST of MELO3C009054 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.2e-14
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0 

Query: 43  FRGGEKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 102
           F   +KV FT +EI++LYDLPN  D YPGQRLIADPRE D+KKIIKLI WL A+W   PT
Sbjct: 151 FMDEKKVPFTVEEINELYDLPNGLDAYPGQRLIADPREGDTKKIIKLIVWLGADWTITPT 210

Query: 103 G 104
           G
Sbjct: 211 G 211

[Close]
BLAST of MELO3C009054 vs. ExPASy TrEMBL
Match: A0A5A7TGJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00770 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0 

Query: 46  GEKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 103
           G+KV FT +EI+DLYDL ND D YPGQRLIA+PR+ ++  IIKLIAW    WM  PT
Sbjct: 99  GKKVSFTVEEINDLYDLANDSDAYPGQRLIANPRKGNANNIIKLIAWPGVAWMITPT 155

[Close]
BLAST of MELO3C009054 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 0 

Query: 47   EKVLFTTKEIDDLYDLPNDPDVYPGQRLIADPRERDSKKIIKLIAWLVANWMRMPT 103
            EKV FTT+EI++LYDLPND   YPGQRLI D RE D+KKIIKLI W  A+    PT
Sbjct: 1230 EKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPT 1285

The following BLAST results are available for this feature:
BLAST of MELO3C009054 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062902.12.6e-4695.00stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0040553.11.6e-1470.18hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK055... [more]
KAA0045335.14.5e-1467.21stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0041156.13.6e-1163.16hypothetical protein E6C27_scaffold128G00770 [Cucumis melo var. makuwa][more]
KAA0049609.12.3e-1066.07transposase [Cucumis melo var. makuwa][more]
BLAST of MELO3C009054 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C009054 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V3T51.3e-4695.00Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3C5D17.5e-1570.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TVC22.2e-1467.21Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TGJ01.7e-1163.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U8061.1e-1066.07Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE... [more]
BLAST of MELO3C009054 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009054.1MELO3C009054.1mRNA