MELO3C008980 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008980
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING finger protein 165-like
Location	chr08: 20642227 .. 20642911 (-)
RNA-Seq Expression	MELO3C008980
Synteny	MELO3C008980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCTGTACTTCTTCTTCCTTTCATTGTTCTCTTTCCGCCTCTCCAAACACCCATCAATTCCTCATTGTTCGATTTCGGTATTCCAGCCGTCTCGTCATTTCAGATCAAATAATTCAACAGACTCCCTCAACCCTCATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGAACACACTCACTCTTCTTAATTTTGCTTATGAGAATTATCTTAGTTCTCT

mRNA sequence

ATGTCTCTCTGTACTTCTTCTTCCTTTCATTGTTCTCTTTCCGCCTCTCCAAACACCCATCAATTCCTCATTGTTCGATTTCGGTATTCCAGCCGTCTCGTCATTTCAGATCAAATAATTCAACAGACTCCCTCAACCCTCATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGAACACACTCACTCTTCTTAATTTTGCTTATGAGAATTATCTTAGTTCTCT

Coding sequence (CDS)

ATGTCTCTCTGTACTTCTTCTTCCTTTCATTGTTCTCTTTCCGCCTCTCCAAACACCCATCAATTCCTCATTGTTCGATTTCGGTATTCCAGCCGTCTCGTCATTTCAGATCAAATAATTCAACAGACTCCCTCAACCCTCATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGA

Protein sequence

MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRLVISDQIIQQTPSTLMGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES

Homology

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BLAST of MELO3C008980 vs. NCBI nr
Match: XP_008442291.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger protein 165-like protein [Cucumis melo var. makuwa] >TYK16021.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 344.0 bits (881), Expect = 9.4e-91
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 48  MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 107
           MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 108 IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 167
           IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 120

Query: 168 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES
Sbjct: 121 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

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BLAST of MELO3C008980 vs. NCBI nr
Match: KAA0043526.1 (RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.7 bits (857), Expect = 5.7e-88
Identity = 171/213 (80.28%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRLVISDQIIQQTPSTLMGDTLIPFSNLRH 60
           MSL TSSSF CS SA+PNT  FLI RF YSSRL+I DQI+QQTPS LMG+TLIPFSNL H
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH 154

Query: 61  PRQQQSIQFLVNQFLCSFNLHS--SVRRTICHEILSFALQFRAILPSFKIEANIDHVEDL 120
           P QQQSI+FLVN+FL SFNLHS  S RRTIC +ILSFALQF  +  SFKIEAN++HVEDL
Sbjct: 155 PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL 214

Query: 121 IIGEQGFQETP-PPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKE 180
           IIGEQGFQETP PPRT GAPESAIERL  K+KFD  NK  EEEIGDCSVCYEELKG+GKE
Sbjct: 215 IIGEQGFQETPSPPRTTGAPESAIERL-RKEKFDVLNK--EEEIGDCSVCYEELKGQGKE 274

Query: 181 VSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           VSRIPCGHVYHKSC+LTWLQINNSCPLCRAPL+
Sbjct: 275 VSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 304

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BLAST of MELO3C008980 vs. NCBI nr
Match: XP_004139003.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical protein Csa_005955 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-57
Identity = 126/230 (54.78%), Postives = 154/230 (66.96%), Query Frame = 0


Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVR R+ SRL        ++ D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNL++P QQQ ++++VN+FL SFNL SSV R + H ILSFA QF      FKIE N+
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           D++++              +GE+G     PP  RGA ESAIER + KQKFDGF  EEEEE
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGL----PP--RGASESAIER-VKKQKFDGFRGEEEEE 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           IGDCSVC EE+K KG EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 IGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of MELO3C008980 vs. NCBI nr
Match: XP_008457277.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger protein 165-like [Cucumis melo var. makuwa] >TYK14831.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-56
Identity = 127/230 (55.22%), Postives = 150/230 (65.22%), Query Frame = 0


Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVRF   SRL        +I D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNLR P QQQ +Q+LVN+FL SFNL SSV R I H ILSFA QF       KIEAN+
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           DH+++              +GE+G         RGA ESAIER + KQK D F++EEEEE
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLS------PRGASESAIER-VKKQKLDWFSEEEEEE 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           IGDC VC EE+K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 IGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

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BLAST of MELO3C008980 vs. NCBI nr
Match: XP_038876917.1 (E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida])

HSP 1 Score: 222.2 bits (565), Expect = 4.1e-54
Identity = 127/236 (53.81%), Postives = 160/236 (67.80%), Query Frame = 0


Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS  T+SS       +PN+ Q L VRF   SRL        +I D+I+QQT ST +G+ L
Sbjct: 1   MSFSTTSSIAYYFHGTPNSDQVLQVRFGVCSRLISRSPSPGIIPDRILQQTRSTPIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
            PF+N+R   ++ +++FLVN FL SFNLHSSV + +  +ILSFA QF A   SFKIEANI
Sbjct: 61  FPFTNVRDVGEEAAVEFLVNGFLRSFNLHSSVCQMMSRKILSFAQQFDANNGSFKIEANI 120

Query: 121 DHVEDL------------IIGEQG----FQETPPP-RTRGAPESAIERLIMKQKFDGFNK 180
           D++++             IIGE+G    F+E PPP R  GAPESAIER + KQKFDGF  
Sbjct: 121 DYMKEFWMEAVSWLHPNSIIGEEGFEINFEEGPPPARRAGAPESAIER-VRKQKFDGF-- 180

Query: 181 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           +EEEE G+C VC E+LK KG EVSRIPCGHVYHKSC+LTWL+ +N+CPLCR  LE+
Sbjct: 181 KEEEETGECCVCCEDLKRKGMEVSRIPCGHVYHKSCILTWLERSNTCPLCRRSLEA 233

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BLAST of MELO3C008980 vs. ExPASy Swiss-Prot
Match: Q6ZSG1 (E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 0


Query: 61  PRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFA------LQFRAILPSFKIEANIDH 120
           P  Q    +L    +  F  +SS  + + HEI ++       L  + + PS    A  + 
Sbjct: 179 PIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRES 238

Query: 121 VEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKF------DGFNKEEEEEIGD----C 180
            E+L+  E          TRGA ++ IER     K+      DG  K++E E  D    C
Sbjct: 239 YEELLQLEDRLGNV----TRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKC 298

Query: 181 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           ++C   L+  G++V R+PC H++H+ CV  WL ++  CP+CR  +E+
Sbjct: 299 TICLSMLE-DGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340

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BLAST of MELO3C008980 vs. ExPASy Swiss-Prot
Match: E9QAU8 (E3 ubiquitin-protein ligase RNF165 OS=Mus musculus OX=10090 GN=Rnf165 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.9e-12
Identity = 48/167 (28.74%), Postives = 79/167 (47.31%), Query Frame = 0


Query: 61  PRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFA------LQFRAILPSFKIEANIDH 120
           P  Q    +L    +  F  +SS  + + HEI ++       L  + + PS    A  + 
Sbjct: 180 PIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRES 239

Query: 121 VEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKF------DGFNKEEEEEIGD----C 180
            E+L+  E          TRGA ++ IER     K+      D   K++E E  D    C
Sbjct: 240 YEELLQLEDRLGNV----TRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKC 299

Query: 181 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           ++C   L+  G++V R+PC H++H+ CV  WL ++  CP+CR  +E+
Sbjct: 300 TICLSMLE-DGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 341

[Close]

BLAST of MELO3C008980 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.8e-11
Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 93  LSFALQFRAILPSFKIEANIDHVEDLIIGE------QGFQETPPPR--TRGAPESAIERL 152
           + F +Q       F++ ANI    D  IG       Q   E  P R  T  A +SAIE L
Sbjct: 151 IEFVIQNNPSDQGFRLPANIG---DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEAL 210

Query: 153 IMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPL 210
            +    +        E   C+VC ++ + +G E  ++PC H+YHK C+L WL+++NSCP+
Sbjct: 211 PL---VNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 268

[Close]

BLAST of MELO3C008980 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 29/75 (38.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 136 APESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTW 195
           AP  A E +I K K     KE  +E G+C++C E  K    +V ++PC H +H++C+  W
Sbjct: 368 APAPAPEDVIAKMKVQKPPKELIDEEGECTICMEMFK-INDDVIQLPCKHYFHENCIKPW 427

Query: 196 LQINNSCPLCRAPLE 211
           L++N +C +CRAP++
Sbjct: 428 LRVNGTCAICRAPVD 441

[Close]

BLAST of MELO3C008980 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 123 QGFQETPPPR--TRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSR 182
           Q   E  P R  T  A +SAI+ L   +      K    E+  C+VC +E +  G +V +
Sbjct: 176 QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEFE-DGSDVKQ 235

Query: 183 IPCGHVYHKSCVLTWLQINNSCPLCRAPL 210
           +PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 236 MPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of MELO3C008980 vs. ExPASy TrEMBL
Match: A0A5D3CVT7 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00140 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 48  MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 107
           MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 108 IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 167
           IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 120

Query: 168 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES
Sbjct: 121 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

[Close]

BLAST of MELO3C008980 vs. ExPASy TrEMBL
Match: A0A1S3B605 (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 48  MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 107
           MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 108 IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 167
           IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 120

Query: 168 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES
Sbjct: 121 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

[Close]

BLAST of MELO3C008980 vs. ExPASy TrEMBL
Match: A0A5A7TNB0 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00200 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.7e-88
Identity = 171/213 (80.28%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRLVISDQIIQQTPSTLMGDTLIPFSNLRH 60
           MSL TSSSF CS SA+PNT  FLI RF YSSRL+I DQI+QQTPS LMG+TLIPFSNL H
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH 154

Query: 61  PRQQQSIQFLVNQFLCSFNLHS--SVRRTICHEILSFALQFRAILPSFKIEANIDHVEDL 120
           P QQQSI+FLVN+FL SFNLHS  S RRTIC +ILSFALQF  +  SFKIEAN++HVEDL
Sbjct: 155 PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL 214

Query: 121 IIGEQGFQETP-PPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKE 180
           IIGEQGFQETP PPRT GAPESAIERL  K+KFD  NK  EEEIGDCSVCYEELKG+GKE
Sbjct: 215 IIGEQGFQETPSPPRTTGAPESAIERL-RKEKFDVLNK--EEEIGDCSVCYEELKGQGKE 274

Query: 181 VSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           VSRIPCGHVYHKSC+LTWLQINNSCPLCRAPL+
Sbjct: 275 VSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 304

[Close]

BLAST of MELO3C008980 vs. ExPASy TrEMBL
Match: A0A0A0LHS2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.6e-58
Identity = 126/230 (54.78%), Postives = 154/230 (66.96%), Query Frame = 0


Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVR R+ SRL        ++ D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNL++P QQQ ++++VN+FL SFNL SSV R + H ILSFA QF      FKIE N+
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           D++++              +GE+G     PP  RGA ESAIER + KQKFDGF  EEEEE
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGL----PP--RGASESAIER-VKKQKFDGFRGEEEEE 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           IGDCSVC EE+K KG EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 IGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of MELO3C008980 vs. ExPASy TrEMBL
Match: A0A5D3CSM6 (RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00260 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.8e-56
Identity = 127/230 (55.22%), Postives = 150/230 (65.22%), Query Frame = 0


Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVRF   SRL        +I D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNLR P QQQ +Q+LVN+FL SFNL SSV R I H ILSFA QF       KIEAN+
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           DH+++              +GE+G         RGA ESAIER + KQK D F++EEEEE
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLS------PRGASESAIER-VKKQKLDWFSEEEEEE 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           IGDC VC EE+K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 IGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of MELO3C008980 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-12
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 125 FQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIP-C 184
           F   P   +RGA      RL+ +Q+ +  + EEE+E   CS+C E+     +++ R+P C
Sbjct: 122 FPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDE--TCSICIEKFSESHEDIIRVPDC 181

Query: 185 GHVYHKSCVLTWLQINNSCPLCR 207
            H++H+ C+  WL + NSCPLCR
Sbjct: 182 LHLFHQGCLFEWLGLQNSCPLCR 202

[Close]

BLAST of MELO3C008980 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.8e-11
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 123 QGFQETPPPR--TRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSR 182
           Q   E  P R  T  A +SAI+ L   +      K    E+  C+VC +E +  G +V +
Sbjct: 176 QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEFE-DGSDVKQ 235

Query: 183 IPCGHVYHKSCVLTWLQINNSCPLCRAPL 210
           +PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 236 MPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of MELO3C008980 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 160 EIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPL 210
           ++  C+VC EE    G + + +PC H+YHK C++ WL++NNSCP+CR  L
Sbjct: 220 DMSQCTVCMEEFI-VGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

[Close]

BLAST of MELO3C008980 vs. TAIR 10
Match: AT5G67120.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-10
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 127 ETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHV 186
           ET   RT G  E  I+  ++++K++   K  ++E   C +C ++LK   +EVS++ CGH 
Sbjct: 194 ETGDERT-GLSEEVIDENLIRRKYE---KRSDDETKRCVICQQKLK-DNEEVSKLGCGHD 253

Query: 187 YHKSCVLTWLQINNSCPLC 206
           +H  C+  WL + N CPLC
Sbjct: 254 FHFGCIKNWLMVTNKCPLC 267

[Close]

BLAST of MELO3C008980 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-10
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 156 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           E +++   C+VC EE+   GKEV+ +PC H YH  C++ WL I N+CP+CR  L S
Sbjct: 364 ENDDDAVCCAVCKEEMI-VGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPS 418

The following BLAST results are available for this feature:

BLAST of MELO3C008980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442291.1	9.4e-91	100.00	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger...	[more]
KAA0043526.1	5.7e-88	80.28	RING finger protein 165-like protein [Cucumis melo var. makuwa]	[more]
XP_004139003.1	1.8e-57	54.78	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical pro...	[more]
XP_008457277.1	5.7e-56	55.22	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger...	[more]
XP_038876917.1	4.1e-54	53.81	E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ub...	[more]

BLAST of MELO3C008980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZSG1	1.4e-12	29.34	E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1	[more]
E9QAU8	6.9e-12	28.74	E3 ubiquitin-protein ligase RNF165 OS=Mus musculus OX=10090 GN=Rnf165 PE=1 SV=1	[more]
P0CH30	5.8e-11	34.40	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9C1X4	1.7e-10	38.67	Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra...	[more]
Q8LPN7	1.1e-09	38.20	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of MELO3C008980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVT7	4.5e-91	100.00	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3B605	4.5e-91	100.00	RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1	[more]
A0A5A7TNB0	2.7e-88	80.28	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LHS2	8.6e-58	54.78	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 P...	[more]
A0A5D3CSM6	2.8e-56	55.22	RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of MELO3C008980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37200.1	3.2e-12	37.35	RING/U-box superfamily protein	[more]
AT3G19950.1	7.8e-11	38.20	RING/U-box superfamily protein	[more]
AT1G60360.1	1.3e-10	46.00	RING/U-box superfamily protein	[more]
AT5G67120.1	3.9e-10	36.71	RING/U-box superfamily protein	[more]
AT5G60820.1	5.1e-10	46.43	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 164..205 e-value: 9.9E-8 score: 41.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 163..206 e-value: 2.2E-13 score: 50.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 164..206 score: 13.241681
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 125..210 e-value: 1.3E-18 score: 68.4
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 23..210
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 23..210
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 163..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008980.1	MELO3C008980.1	mRNA