MELO3C008902 (gene) Melon (DHL92) v4

Overview
NameMELO3C008902
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDUF4283 domain-containing protein
Locationchr08: 23022269 .. 23022580 (-)
RNA-Seq ExpressionMELO3C008902
SyntenyMELO3C008902
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATAGATGATTACTTCATTGAGAAAACTCCATTGATCTGTAAACAAAGTGGAATGGATAGCCATCATACTATCAAGGATCAGAAGGACACACATTATGAAGGAGAACCTAGTGACCCATTGAAAAATGAAAATGGCGTTCAGGATGAAAATTTGTTCAAACAGAAGTTGGTTGAATGGCTCAAAGAGAATGAATTGAAACTATCTCATAAATATCCGACCAACATGGACAACTCTTCATATGTGGTTATTGATAGTGTTCCAGCCACTTCGGGTGAGGAGCCTAAAGGTGATACCAATCTTACATGA

mRNA sequence

ATGAAGATAGATGATTACTTCATTGAGAAAACTCCATTGATCTGTAAACAAAGTGGAATGGATAGCCATCATACTATCAAGGATCAGAAGGACACACATTATGAAGGAGAACCTAGTGACCCATTGAAAAATGAAAATGGCGTTCAGGATGAAAATTTGTTCAAACAGAAGTTGGTTGAATGGCTCAAAGAGAATGAATTGAAACTATCTCATAAATATCCGACCAACATGGACAACTCTTCATATGTGGTTATTGATAGTGTTCCAGCCACTTCGGGTGAGGAGCCTAAAGGTGATACCAATCTTACATGA

Coding sequence (CDS)

ATGAAGATAGATGATTACTTCATTGAGAAAACTCCATTGATCTGTAAACAAAGTGGAATGGATAGCCATCATACTATCAAGGATCAGAAGGACACACATTATGAAGGAGAACCTAGTGACCCATTGAAAAATGAAAATGGCGTTCAGGATGAAAATTTGTTCAAACAGAAGTTGGTTGAATGGCTCAAAGAGAATGAATTGAAACTATCTCATAAATATCCGACCAACATGGACAACTCTTCATATGTGGTTATTGATAGTGTTCCAGCCACTTCGGGTGAGGAGCCTAAAGGTGATACCAATCTTACATGA

Protein sequence

MKIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEWLKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT
Homology
BLAST of MELO3C008902 vs. NCBI nr
Match: KAA0034887.1 (hypothetical protein E6C27_scaffold103G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 104
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 359

BLAST of MELO3C008902 vs. NCBI nr
Match: TYK05442.1 (hypothetical protein E5676_scaffold83G001410 [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 8.7e-50
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0

Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNEN VQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 104
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDT+LT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 359

BLAST of MELO3C008902 vs. NCBI nr
Match: KAA0056069.1 (hypothetical protein E6C27_scaffold323G00190 [Cucumis melo var. makuwa] >TYK01525.1 hypothetical protein E5676_scaffold451G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 25  TIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEWLKENELKLSHKYPTNMDNSSYVV 84
           T KDQK THY+GE S+PLK  N   DENLFKQKLVEWLKENELK+S KY  NMDN SYVV
Sbjct: 209 TTKDQKSTHYKGERSEPLKGHNTEHDENLFKQKLVEWLKENELKVSSKYSINMDNFSYVV 268

Query: 85  IDSVPATSGEEPKGDTNLT 104
           ID+VP T GEEPKGDTNLT
Sbjct: 269 IDNVPVTPGEEPKGDTNLT 287

BLAST of MELO3C008902 vs. ExPASy TrEMBL
Match: A0A5A7SZY7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00140 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 104
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 359

BLAST of MELO3C008902 vs. ExPASy TrEMBL
Match: A0A5D3C2M8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001410 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.2e-50
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0

Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNEN VQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 104
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDT+LT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 359

BLAST of MELO3C008902 vs. ExPASy TrEMBL
Match: A0A5A7URE7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00870 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.1e-25
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 25  TIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEWLKENELKLSHKYPTNMDNSSYVV 84
           T KDQK THY+GE S+PLK  N   DENLFKQKLVEWLKENELK+S KY  NMDN SYVV
Sbjct: 209 TTKDQKSTHYKGERSEPLKGHNTEHDENLFKQKLVEWLKENELKVSSKYSINMDNFSYVV 268

Query: 85  IDSVPATSGEEPKGDTNLT 104
           ID+VP T GEEPKGDTNLT
Sbjct: 269 IDNVPVTPGEEPKGDTNLT 287

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0034887.12.1e-51100.00hypothetical protein E6C27_scaffold103G00140 [Cucumis melo var. makuwa][more]
TYK05442.18.7e-5098.04hypothetical protein E5676_scaffold83G001410 [Cucumis melo var. makuwa][more]
KAA0056069.11.3e-2477.22hypothetical protein E6C27_scaffold323G00190 [Cucumis melo var. makuwa] >TYK0152... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SZY71.0e-51100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C2M84.2e-5098.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7URE76.1e-2577.22DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008902.1MELO3C008902.1mRNA