MELO3C008880 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008880
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	exosome complex component RRP4 homolog
Location	chr08: 23606770 .. 23622588 (-)
RNA-Seq Expression	MELO3C008880
Synteny	MELO3C008880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTCAACTATTTTTGAAAATGAGTGCTGCGAGACAAACCTATTATAATCTGTTTCTATAACAATTTCCCAAACAAAACCTACACATTGTCAGCCGTTGCCCCGCTGCTCAGTCTCCTTCTCCGGTGAGCCTCCAACAGCCACAGGCGGAAGGCAGGACAACTGGATCCCACAGCCCCTCAAACACGCAGCCCTGTCGTCGAGGGTGGTTTAAGTTCACCCATTAATTTGACTTTGCGACGCTAGCGTCACTTCAAACGGCTTCGCCTAGGTCTTGGCAGCATCATTTCTTCTCCGTTAGAGACTCCGGCGCGAACAACAGGTTGTTCAAAACATTTCTGACGTGTGTTTGTCTTGCAGCGCGGCATTTCTGACTTGAGGGTAAGTTTTCGGCTGTTACTCACACTCTGATTAACTTCGAATCAGTTTATCCATAACATTCGAGGTTCATATTAACTTGCTGTTTGTAGTTTAGGAGCTTTTTGGAGTGACCGGTTGGTGGCTCTTGGGTAAGAACACCCCTCTTGGACGCTCTCAATTTCGATTAGGGTTTGCGATTTGAGTTCTAATTTCTAAATTATGTCTTGATTGTTTAGAACTCGAGGAAGTTGGCATTTGCTCAAGAAAGTGAATTTTTGATTGAGAATTGTAGGATTTTTGAACGAGGTAAATGGTTTCCGCATCCCTTCCAAATATAAACTTGACTGTTTTAACTTGTTAAAGACTTTGAAAGCTTGTTTTAGAACACTGAGAGGTACGTCTTATGTGATTTGAGGATCGACTGAAATTGTTTTGTATGTTTTTGTGAAATGGAAGTATGTGGCTGTTTGAAACGATTTTGAATTGCAAGGAATTATGTTTTAGCTTGATTGCTTGTGAAAAGTTTGTCTGGTTTGGTTTAATGAGTTCTTCAATGGAAATTTTATTATTGTTATTGTTTTTTTTTAAATAATACCACACCTTCCATTAAGAAAATGAAAAGAGACTAATGCTCCAAAATACAAAATACGAGGGAAAATGTATTCTTTTTTTTTTGGATGAAATCTACAACTTTTATTGAGAAAGAATGAAAAAATATACTTATAGAATTATAAGTTATTATGGTCTTTTATGTAAAATAATGAAGTCTTATCGCATAAGAAAAGGAGCAAATAAAGAAAAAAGCAAGTGTGAGTACTAGATGTCAAGAGATTGTCATAAGCTCTATAAGTCTTGTTAGTGAAGCGTTCTAAATATAACTTGCTTAATGTAGCTTGGTCATTTGATCCCTAGCAGTGAGCAAGTGTGGCGTTTAAAGACACCGAGAGGTGCTCGCCTTAATAATAAGCTCGTTAACTAAGTTATATTGCATCAAGTTTCTTTGATTTCTTAATCGCTTGATAATGCACATACTTTCCTTCACCCCCTTCTTTTATGCAAGTTAGTTCACAATTCCATCTCACATCCATCTTAATTCTCTGTAGATAAGTAGATATAGTTTAAACTTACATTCTTTCACATTGTATAATTTATTCTTTTATACTGCCTAAATGTCTAGTGAACTTTAGAACTGAGCTTTGATATCAATTCCCTGTGTTCGACTCTGGATCACTTAGATAAACCTATTGTTTCGCTTACACTTGGATAAGACATAGGAAAACTTGTACACGATGAGGACTTGGAAGTATGTGATGAATAGAGACATTGAAAGCATTTTGCATGCAATGATCATGTCTGAACGCAAAATGAAGAGATTTATAAGGGGCATTTTGTGTGCAATGATCTTGAATCAATGAGACATTGTGAAGAATGAAATATACACATACAATACACCAACAAAAGCAACAACACTATTTTCAAGCCGCATCATTAGTGTTGCTTAAAATTAAGATAATGCATGCATGACGCTGCATTTACCTTACTAAGTCCATGGAGTTAACCAACTAGATCAAGTTGTAGGCACGGTTGAGTGGGATTGACTCCCAACAAGCGTTGACTCTAAAACACAATCAAGCATTGACCTATTTCAGTCGCCCAATAGTCGCTTAAGTAGAGCCTAAACATGACATAACCACGAGCCGTTGCATATGCATAAAAATAAACAAGCAGCATACAGAAAAGCCAACCCACCGAAACACTTCTACTAAAAGAATGGGGATCAACTAAGTCAAATATTACAAATGGAATAATTACAAAAATGCTTCCAAATTGAAGCCCAAAGGGACACGTGAAATCTAGCCAAAGACCAGATCTCACTATGCTCCCTCTCTCTTCCTCGAAAGACTTGTTCCTTTCACCCCAAATGTCTCAAATAGAGCACACACCTCGACAAGCCATGAAAAACCCATTTGTCTTTAAAGGGTGGATGGAGAAGGAACTCTTCGATCATCGCTCTGACACTCTGAGAGCCACCAAAACTAACACCGAACTCTTGAAGGAAAGAATTCCATACTGCCTGCGCATAATGGCGATTCCAAAATAGATGGTCAAGATCTTCCTTTGCTTTTCGACAAAGCATGCAACAAAAAACCCCGGCAAGTAAAGTCCTCCTCCTAACAAGCCTATCTACCAGCTTTTGAAAAAAACCCTTTCTTCTACATCGCCAATCTCTGTTAGATTTCCTCACAAATAGGATCCCAAAAGGACAAAGCTCTCGGATTGCCCCTAGATGAAGCCAAAATTAAGATAGGAAGAACCAACCTCACAATCAAACACCTTTGCCCACCCCTATAGCTTAACGTTATCCATATTAATACCAAAAATAGTGCACTCGCTTCTATTGATTTTTAGCCCAAACAAATCTTCAAAGAAAGCAACCATATCATAGAGGATGAGGAAGGACTTTTCTTTCCTAGAACAAAATAATACTGGATCATTAGCGAATTGCAAGTGTGACAAGGCACTTCATTCCTGCCAATCTTAAAAAACTCAATAAACCCCTAAAAGCTTGAATCGACCCTCTTGGTGTTCCATTGATGAGAATAGAGTACTTCATATTTCTAACACACCCCACATCCACATTCTCCATTTATAACCAAAACCTTTCTTCATCATCACACTACCTAGAAAATCCCAATCCACATGGTTGTACGCTTTCTCAAAGTTGAGTTTTAACAGAACACCCTCCTTTTTCTTCGACCTCTACACCTCAATAGCTTCGTTAGCTATAAGAACTTGATCTAGGATTTGCTTTCGGTAAAAAAAGCACCTTAAGCCTCAGAAATTGTCGACAACAACACTTTCCTTAAATGATTAAGCTCTCATTCTATTTTCCTTTTATTTATTAATATTTTAAGTTCGAAAAACAAGTTCCGAATACAATTGTCAATTCTTTATGGTTGAATTGTTGTAGCAAGGAAATTGGAAAAATTTTAGTTTGGAACAAGACTTGGAAATTTAAGTGTTGAAAAGATGGAAAAACCAAGAAAATGGTAGTGATAAGTTGGAAGCATTATGCTCATTTCTAACTATTATTATTGCTATCTTTCTTCTTCTTCATTCCTTTTTAATGAGTTTTTTTTTAAAAAAAAGGAGGGAAAAGAGAAAGGAAACCCACGCACGCAGCCTCTCTATCTGTCTAATCTTCTCTTTCGCTCACCATCTCTCCCTCTCTTCCTCTCCTTCGCGCTGACGCCACCAACAAGCCGATAACCCTCCTCTGATGCTGGACGACAACCAGTGCGCCACGTCAGCCACCATTGACTTTTAAATCTTCCTTGCCATCAATTGAACTCGGGCTGTTTTGTGTTGCTCCATTCGTGGTCGTCGAGCCAAGCTAGCTTTGAGTCGCTTCGTGCTGCTTACTACCCACAAATCGTCGTGCTATGCCACCCTTTGCCATCCCTGACCTCGCTGAATCTGTAAGTTGATGTCTGTTTTGGGCTGTCCAGTGAGTTTTGTGGGTTCTTTTGGAAGATCTGTACTACCCATTAGCTTTTGGCTTCGAATGACTAGTTTCTATCACGTTTTGGTGTTAGATTGAAGAGTAGCGGTGCCGTTTAGTTGCTGTCCAGCGTGTTCAATCATGTTTTCGTCAAGATTTTGGTAATTAGTAAAGGCGAGAAATTTTTTAAGATGCGAATTAGAGTTTTGGGTAAGGATTTACTTAAGTTGGATTTTTTGATGAGTTTCGACTACCCATTAAGTTTCGATTTGATTTTCACAATATCCATAGAGTTCTTGGAAGGATTTAGCTAACATCTAGTTGAGGAGTGAATTTTTGGGAGTTCAATACAAATTTGGGTAAGATTTCAAGCTTTATGGTTTGGGTCATGAATACCCGTTTAGTTCTAGTGCTAATATTATGCCCATGATGTTGATAGCTAGATTTCAAAGTTAGAAGGTCACGAGGGTGTTGTCCTTTAGAAATAAGGCTACTTTGATAAGCGTTCGGTAAGATTTCGTTGATAGTTGATTTTCCATGGAAGTCTTAAACATGCGTTGATTTTTGGCTTCAAATTAGTGATACCTATTAAGTGTTTGGAGCAAAATCAATTTACCCATAATTTTGGATGCTAGACTCGAGTTTAGAAAGCCATTAGAGTGTTGTCCATTGAAGTTGAGGTTATTTGTAAGCCATTGGTAAGATTTTGGGAAATTCTAGCAAGTTTTCTTGGAGTTTCGTGAATACCCATTTAATTTTAGCATGAACTTGATATTACCCATATTGTTTTGTATGAGAGTTTGAAGATTTGGAGAACTTGGAAACATTGACCAACATGTTTAAGGTCGTTTTAGACAAGTTTGGGTAAGTTCTAAGTTTTGACTTGTTAGATTGATATTGAGTTTGTTAATGGATTTAAACCTCTAAGTTATGAATATTGGATATAAGAGTGTATGGAATTAAAAGACGACTTAAGTTTGGGTGCTTATGGCGTTAAGAGTTCAAGTGAAGTTTAAGGGTCCAAAAATGAAATTTTAACCTAAATTAAAGCATTTGGTGAATAGTTCAATCTAAATCTCAGGGAGTGCTCAAGGTTGTTGGTCTCTTGGTGCTACGATGGATATACATAAAAAAAACATTGATAATGGAGATAAAAGTGTATCCACCTAAAAGACCCTTTGAGCTTGAACTAACTTGGATGCTCACTGGGTTAAGTATCTAGATTTTAAGTCTAAGGATCGTAGCTGAAAAGTCTAGTCTAATCCAAGGCGAATTGAGAATTCAAGAACTCTAGAAACATAAAATAGTTTGAGTTGGACTTATGAAGTGTTTTGGAGATTGTTGTGTCCTCTTGCTTTGTGAAGATAACTGATAAACCTTAATCTTTTCTTCAGGCCAAATTGAAGTGAGGAAAGCATATAATCCTGGAGAATCGAGTCATTGATGGTGAGTGGTTTACTTTCAAGTGTTTTCATTATAGATCTACATATGTTATTATAGTTCGCCATGATTGTGAAAATTTATAGTATAATTGTTTTATGAACTATGTGTTAGAAATGTTTTTAAAATATGATTTCTGATTTTCTTGAACTCTTATATTTCTGAAATATGGTTGAATCTGAGCTTATTAATCATGATTTAGATGACAACGAATTTAAAAGAATACTCCTTGATCTGTTATTATACTTGGATGTTTTGAATGAAATGTTAATCTAAAAGTATGTGTTGATGGCTAAGGATTGGAAATGATTTGAAAATGTGTTTCTAACCATATTTGGCTTTAAACATTAAACATGTGATGTTTATGAAATAATGTTGGTGATTTCCCTAAATCCTACGTGGATGTGTTTCCGTAGTATCACCTATGGTTGTCAGGGGATTTCGGGGCTGAAAGAGGCCGTGACTGGAGATTCGAGAATTTGAGCTTAAGTGAGGATATGGATGGGGGATTGTGATATTGGCTTCGGACCTAGCTTAACTTATGGTGGGTGGCTCTATGTGCACATAAGAGCATAGATATGGAGGTTGCTATTGTAGTAGGTGCTAAGTATGTGTGATCTCAGTTTGACCGCGTGTTTCCTTGTGGATATGGATCACGTGTGAGTTAGTCTCGGCCGTGTATTTAGTATTTTATCATGGTTGGATTGGATGGAGGTTGCTATTGTGGCAGGTACTAAGTATGCATGAGCTTAGTTTGGCCGCATGATTCCTTGATCATGTGTGAGCTATTCTTGGCCGTATCTTTAGGCGCTTTGCTATAATAGACCCTTGTACGGTATAGGTTTGTTGGCATTACTTGTGAGTTATAGTAATATGTGATGATAACGTGTTAATTATTATTTCATTATTGATGCATATTTACATAATTTTTTAGAGCTTGTTTTATGAGCTTTTTTCTTCTAAAAACTTACCACTCACTGAGTTTTAGCCCACGTTTTCAATGTTTTTCTTCCCCATTCAGGTAGCGGTCAAGGTCTAAGCATTTGTTGAGCTCCCCATCACCATTGTAGATTCCTATTTCTTTTGTATGTATATACTTAAGTTTTGTATTGCATTATGGGGTTATTAGAGGTGTCGAGGTTCATGCTATGGACATGTGATTGAGAGATTATTAGTGGACTGTAATCCCTTTGTAACTAAATTCTTAGTTGGATATAAACTCTGATTGAGATTTTGGACTAGTTTGGATGAGTGTGTGGTGAGACACACTCGATGTGATTTTGTGTCTGAAGATCTCTTATATATAGAAGTGAAAATTCTTCCATTTTCAGGTTTGGCTAACCCATGTTTTAGGGAGATGTACTAAAATGTCTGGAAAATTTTATTATACATGTCCTATAGAAGTTTAAGTTGGAAAAGGTCGTTTCCAAAAGTGTTTTCATGCCACGATATAGGTTAGAGGGGAAAACAACGAGGTGTGACATGATTAGCAAGAGCCTTTAGCCAAGATATTATACACACTAGTAATAAGATTGATAGGCTGGAACAACTTTACCCTGTTTGCATTTTCCTTTTTGGGAATCAAACAGATGAAGGTTTCCACCATTGAGCTGTTCAGAATCCCTCTTTCAAAGAACTCCTTAAAAACTCCATCCAGACCCCTTTTGATAAGATTCCAATTTTTCTAAAAGAAAGCCATAAAGAACCCATATGGATTTGGAGATTTGTTACCTTCTCAACTGAAAACAATCTTTTTAATCTCTTTTATAGTATACAGTACCAACTCCTCATCCTCCCAGGTGAGATGGGACTCCAGTCAATACCTTCCACAAGGCTATAATGACTTATTCCTCACTTCAAGGCTATAGAGATTAGAGAAGGATTTAATGATTTTCTCCTTACTATCTCTTTTACAAACCCCGTTGTCTAAAAGCAAGAGACCAATATGATTTTTATTCCTTTTTCCATTTGCCACTTTATGGAAGAACCCAATATTACAATCCCTTCCTTAGCCACTTAATTTTACACTTTTGGTCCCACTCACATCGTCCTTTCTAATCAACTCCACAAGGTCCCTTTTAAACCAACCCTTTCCTCCTTGAGATCTCTATTAAAGGGCCTTCCAACTTAAGAACATCAATCTCATCAATCTGAATATTAAATTCGTTCTTTTTCGATCCAATGTCACCAAAAACCTCTCTATTCCAAACTTTAAGCTAACTGTTTAAAGATTTCAACTTCTTCACAAACTGAAAACCCTCCCACCTTCCTTGAGCCTGCACATTCCACCAAGTCGGAATAGTCGCTTTGAAAGAAGGATGATCAAGCCACATGTTTTCAGATCGAAAAGGAAATAGACCCCACTTAAGATACCATTAGTCAAAATAATAGGCGAGTGATCCGAGGTGATTCTTAACCCTCTGAACTACCAAAGGTTCCCAAACCTCTCAATCTAGGCTTTTGACAAAAGAGCCCTATCGATTCTTGTAGCTGCCCCACTATTAGCCCAGGTAAATTTGCCCCCATCAAGAGAAGGGTTAAATAAACCACTATCATCGATAAACTTATTAAAACATTTAATAGATCTAGTAATTCTTTCACCGGAGGTTTTCTCATAAGGGGAGCAGACAACATTAAAATCACTTGCCAGCACCATCTCAGCCCACAATAACCATAAAGATCTCCCTACTTATCCTAAAGCAAATTCCTTCCTCCGATCTGGGGGGGGGGGCTACAAACTCCCGTTACCCAAAACTCTTCACCATCACCATTCAGGAAAGCAATATTAATGGAATGTCTACCTTTAATTACCTTAGTGGCAACACACGATCTTAAAATCCACATCATCAGGATACCATCAGACAAACCCTCACCATTCAGAACCTCCCATTGATAACATTGAAAATACGCTATCTTATTTTGCTTAAATCAGGATTGTTCTGGTATTTTACGCCTCTATTCCATGATTTTGTAGGTATTGAGCTTAATTCAGGGCATTCTTGGCATGTCCATTTTGGGACTAATCGAGCATAATTGAAGGTTTAGAGCATTAACGGAGTTAGCAATCATCATTTTGGGCATGAAGGCACGACGCCGCAGTGCTGTAAGTTAGAAAGCAAATATGTTGGACAAAGTACACGGTGCCAGGGCACTACCCCATCTTTTTGTATTGAATCTCTAGCCGGCCCTCGGGACACAACTTTTGACACGTTTTTATACATTCTGGACAGAAAATTTTAGGACACATTTATCTATTCGATTGAAGACTCTTGCTTATTATTTTTTATGTTTTTGAAGATGTATCGATGCTAAGGTATTCATAGCTAGCTCAAAATTTTAGATTTATCTTTGATTTGCACTCTTATGAGGTTTTGAATATTTATCTCTTGTGAACTTATTGAGTAATTGAATTCTTTACTTGAGTTTGTTACTATGATTAAATATAATCGGCTAATTGTCAGTATTCCCAAATAATTCTTTGGTTTGATGGAAAGCCTCAACAACTTTCAGTCGATCACCCACTCCACCCTTCTACATTTCCAAATGCTGGCAATACTCCTACCACAAAAGTCACTTCTTTTGGTTTCCATCATAATAACAATGTTTGAATCCTCTTGGTACAATCTACAGACTTCGACGAACACTCTTGAGGAGTAAAAATTTCAGGGCCACCTTCTGAGTTCACCTCATTCGTTAGCTTCAGTAGACGAGGCTTCTTTATAGACATCGGCAAGGAGAAAAGCTCACGGGAAGCTTCATCTTCTTTAAATAATTCGCCCGTCTCCACCTCAGAACGTTTAATAAGAATCGGAGTCAACAAGGACTCATCTTTGGAATTATTGACTATCGGTGGATCTAATCGAAAATTTCATTGGATCCGACGACTCAATTCCGTTCTCCTTCTCTCAAAGAACCCCTGGATTCTCGTCAAAGTGTTTAGGAGAGTGATTTTCAATCTCTAAACTTTGTTGGATTAAACTAGAGCCCGGAAATTTCACTTGTGTCACCTCCTACTAGGGAAACAGTTTTTGGAACTATATGTTTTGGTTACAAATATATATGAAAAAAGTTTGGTCCATCTGATAGGGCTGTCCAGATATGCCAGGTTTTGTTATGGGGACTGTATCCGTATGTACCCAATGTGGAATTGATGATAAAGGATATGATTGAAACTTATTTGTGAGGAACTTAATAGTGGTTTGTCATTCATTCAAAATGAAGATTAATGTGTGTTGAACGAAGATTAATGTGTGTTACACTCATATGACCTCACACTTAAGTAATTGTAATGGATGTTTTGGTTGACTTAATCCACATATCTGAATAAATGAAATGATTTGTGTTTCACTTCAAAAAAAAAAAAAAAAAAAAAGAAAAGAAATGATTTGAGTTATGGACGGACAATGACAATGTCTGGACAACTCCAACTGTGCATCTTTTCCATTCTATTAACTGAAAGTATGGATTGTTCAAAAGCCCCATTGAATGAAAGTATTCGTTGACTGGTAGCTCTGCCTGATTGAAAGTATTGATCATCTGAAGTTTTGTTTTGTTGAACGTATTGTATGATCTTTTTTGTATTAGAAACAATTTCATTTTGCGACTGAATTATCTAAAATATCCAAGGATATACAAAAGCCCATTGGTAGGAATTACAAAAGATGTCTCCAAGTAGCAATAGGGAAAGAAAAACTATGAGTTTGTGATAAGAAACCCCTGGTCATTGGATCTAAGAACCATGTTAAACAACAAGACTCAAAGAACACAACCCCAACAGTCCCAAAACCAATTTGATTTCCCTCTAAGATAGGTTAGATTCAGATTGCTTAGATGATCTAACAAACCAAGGATCGGACAAAGTTAGAAACTTCCTTCAACCCCAATCTTCAAAGCACTCCACAAGTAAGGTAGATCAATTCTCACTTGAATGCTCCAAATGTTCGTGCATTCTATCACAAGAACACACAAAAATACACAAGAACAAAATTTTCCATTTTAGAATTTTTCAGATTTCATTCATCCCAATTTTTCTTTTTAATTGTGGAAATTACAACCCTATTTATATTAATTAAAATATTAAATGAAAGGCCACAACATTTAATTTTATTTCCTTTCAACTACTATAATAAATGAAAACAAACATTAAATAAATACATAATTTCTTAAATATTTAATTTTATGACTTTTGGATTGTCCAAATAACTTTTCAACGTCCAAACATTGCTTCTCTTCGACTTCTTCATTTGATTCAATCCTAATTTGTTAGTCCATATCATTCTCCTCTACTTCAAGAAGATTTATCCTCAAATCTAAAGGATCTCTTTTGAATGTAGCTTTCAGTAGTCATCTTCTTTGCATTTGAATTCACGAACAAAGTTCAACATTGAAGAAGACGAAATTGTAAAACTAGGACTGGAAGTGACACTTCTTTTGAGATTTTATATAGTGGACAGAATGTGATGAGATAACTAAAAAAATGGAAATTAAGAAAAATAAGAGAAGAACATATTGCAAAAATGGAAAGATATACTCGATCTAGAGTCAAAATCTCTGATACCAAATGATAAGGCAATCCTAATCCTCAGTCTAAAGATCCAAGCTATTAACGTATCAAAAACCTTTGAAATAAGAAACTAACAACTCCTTATGCTAATTTAGATCAACTAAGAGAAAGTTAGGGTTAGATTACCTCTTAGATCGAAGATCTAGAAGCAAGATTTGGAAATCTTGTTCTAAATTGAGTCACTCCACAATCAAACTTGATCAAGGTTAGACTGAATGGCTCGCTTGCATGCTATCACAAGAATTGCAAAAAAATTAAGGGAAAAGTCTCAAAATGAGATTTCAAATTGCAAAAGTCTTGTTCTTACAAATGGAAGGATAAAGGCATTATATAGCTTTGTAGATATTCTATCCTAATTAATGAAAGTACCCAAAACTCAAAATAAAACATTAACTAAGTTTTCTATCTTCCAACAACTATCTTCCAACCATCATCTTTAATACTAGTCTATTAATGGTAGTTACACGAATTTGTAAAATTAAAACAAATGGAAATACAATAAAAATGTAATATTAACTAAATCATGAGGTCTTCAAAGTGTTGGGTTCATGGAAGCGTAATGTCTACCCCATTGTCCGCTTCAACTGAGAAAACATTGACATTCAATACTCCAAATGGTCCTTCATCTCTTGTATTAGTATGTGGCACATGAAATTGAGGGTGAACTGACCCTATCCATTCTTGTACATGAAGAATGAATGATTGTTGAATCTTTGATGCCTTAGATCTTGTAATCGATTTCTATCAGTTTGAAGTTCACTAAATTTCACAAAAGAAAAAGAGCATTGAAGAAAAGCTGTATTTAAGATGTCTTTTGAAGTCTTGACTTTTTTTTTTTTATAGAAGATTCGTGCATTCCCTTTGTCCCATAGTTTCCATAACACAAACGATAAACAAATCCATAAATTTTCTTTTGTGCCCTTAAGGGGAAGATCAATACACAGCATATAATGCCAACTTAGAGTGTCAGTAGGGGGGACCGTGGAGCAGTTGAAAGCTGTGAACAATTTGGACCAGATCCCATTGCCAAGGGGGCAATTGAAAAGCAAGTGCTTAATAGATTTAATGTTCTTATGGGAAAGGCAGTACCATGAGCGTGAAATGTTGATTTATGGGCAACCTTTTTGTAGTCTATCCACAGTGTTCATCAGGTAACAGGAGTTTTTTATTTCCCACGATTGAAACTTAATTCTTTTAGGACAAGCATTTCCAAATCTTCTTGTATAAGTCTTCGGCAATTGAGAGACTATTAGCAGCGAGATGATTGTCCAAATTTTTGTGTAAGTATCCATTAGTGTCAAGCTCCCAGGCCCATGTGTCATTTATAAGGCTTTTGTTTTGCTCAAAATCTATTTGAAGGTTTCACTATGAACGTCTAGTTTAGAAAGCTTATTTGACTATAGGATTTTAGTCTTTTAGAGCTTATTTGATCGGAAGATTTTGATTTTGAAAGCTCTGTGTAACAAAATTTCAACTGAAAGATTTGCAAACGTTCGTATTTTTTTTCTGTTTAAGAATGTTTGGAAAGGGGACAAATTTTGGATATGGGGCTTGGTTATCAAGTATTTTTGTACTTATTTTTTGTTTTTTCAAAGTACTTTTAGATGAAGGGTTTTTTCAAAATACTTTTAGATGAAGGATCAGGTAATAGTTTTGAAAATAGAAAAGTTTGATATTCTGGCCAAAGGCATCCTTTTTTTTTGGATACACCTTAGAAATTGTTTGTTATAAGTTTTCTTCATCTGATTTGTATCAGTTGTAAATGTTTGTAATTGATATGCTTCACATTGCGATTTTAGTCGCTATATTGGAAAATACTAGATGTTACTCATTATTTGTTTGTTTGTTTTATCACGTGTCATGTCTTTGCAAATACTTTTTGATAGTATGTCTATATACTGGTCATGAGAATCATGCAACACCACTATGTTCTAACGTAGAAAATTTCCAAATTCAGATATGAGAGGTTTACAACTTTCCTTGAATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGTACATCACTCCTCACTACTCTTTTTATAATAGATGCTTGGATTGTGTACTTGCCAGGAGATTATATGCATTGCGCTATAATTGAAAATTGTATACAGGGGACATGGAACTCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAACGAGTCAATAAGCTTATCTATGTACGTGCCTTGCGTGCCAGGTTGTCCATGAACTTTGTAATTTGGTTTTTCGTAGCCTCGTTTTTTGGTCTATTGTTATGATATCTTTTATGATCTAATTGTCTGTACTGGTTATTAGATATAAACCGGAGGTTGGTGATATCGTAGTGGGACGTGTTACAGAGGTAAAACCAAACATTTACTATTTATCTTTTTGGTTTTACATAAAGGTAACATAGAGATATTGGTGAGTAAAACAGACAAGAAAAACTTATTCTGGTGTCTTGATTACTACGCTTTAGATAGGAAAAATGTGTTACAATGCCCCTCCACCACTCCATTTTTTTCATACCATCTGATGTGATCTTATTCAGGTTGCTCCAAAACGTTGGAGATTGGATATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCCATGAACTTGCCCGATGGTATTCAGGTATTGGAGTATTCCCTTTTGTTATGGAAATAATGGTGCTTACTGCTGCACCAGACTGTGAATTAGCTATGCTTTCTGAAAAAAATTTGCTGCAACTGATTCTCTCTCTGTCTAAGAATGGTTGTGTTTGTTGTAACCCCGGGTTAATTGTATTATTTTATTTCTAGAGGAGGCGAACTGCTGTCGATGAACTGAACATGCGGAGCATTTTTGAAGAAAATGACGTCATTTGTGTAAGTTTGATAGCCTTTACTTTCACCAATCAGGTATCTTCTACCAAGTTTGTCCCGTGTTATTCGCATAAGGTTTTCTTCTAGATTTTTACATTTTTTAACTTTTTTTTGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGGTGGTGTTAATTCTTAGCTAGCCGAGTATATGGTAGGTTTAAAATATTTGTGGCTGGCCATCAATATATAAACATTACTGTGTTCATGCTCAATTTTCCATTTAAGGAACAATGACCATACCACATCCTTTCTCAGGCCGAAGTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGGTAAAAAGGAGTCTTTCTTAAGCTCCTGGATGTTGGCGTAAACAAAATACGTTTAAAATCAAATTTTGTACGTATCCCGTCTCTTCATTGGTTTCTTAGGAGAGACCCCACAGAAAGATTCTTGGTATCATGCGAATACTGATTTATAGTCGAATAGACAAATCTTCTGAGGAATTCTAGCCGTTAAAATGGATTATGGAGATGATTATAAAGTTGGTGCACAGGAATGAGGGAGGAAGCCATGAAGGGATGCCATAAAAGTGAAAAGAGGGATAGGAGGAGATAGCGGATGGGTGGGCAGAAAAAAAATACGAAAGATGGTCGCAGAAAAGTGATTTTAGAGAAGGAAAAAAGGAAAAAAAATCTTTTCTAACACGTGAATGGTTATACCAAATAGAGCGATAGAAGTTATGTCTAATTGTTACAACCCTGTTGTTTTTTAATTCTTTTTTGAAAAGCAAGCCTATCTCTATCCAATCTTTTACGATACATTTCATCGATCTTAGTAAAAAGAGTTCAATTCTAAGTCAAATTTAAAAAACAAAGACAAGTTTTTAAAAACTATTTTTTCTAGTTTTCAAAACATATACTTGATTTTCTATAACATTAGTGGGAAGTATATACTAAAGTTAGAAATTTAAAGATGGAATCTGTGTTTATAGGATTTCAAAAATTAAAAACAAAAAAACAAATGATTACCAATCTATTATAAGTTCAAAATCTTGAAGGATAGCTATATTTGAATATGATATCTTTCGATGCAATTGTTATTAAATTCCTAAAAACTTTTATGGCATCTTCTCATATTGTTTCTTCATGACTGTTGTGATTAAGATATGTGCATATGTATATCCAGCTTGAACGTGGTCAGCTGCTCATAGTTTCACCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTGGATCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGAGGATGCGATGATAGAGGATCACGTTGATAAACCTGAACAAAAGGCTTTGAAATTTGAAGGAACTGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGCAGAACTGCAAACGCTATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGTGTTCTCACAGCAGAAAAAGAGGTTGAACGACGTTCTTCGAGTAAGAAAAGGGGGTAATTTTGTCTTCTTTCAAGAATTGTGAGTAATTTGAATTACCAAAACCGTTTGATTTGCAGAGAAATTTAGTGTTATTATATTATGTTGGATTTTAGTTTACCACCACTTTGTATCTGTTAGTATCAGTATAGAATACAATGTCCTCAATTATTATGCAGTACGTGGTTTCATAAATGTCCAAGGATTACTTAGGATTTTACCATATGTCATATCTTTGGCTAGATTAATACTAGACGAAACTTAATTTTATTAAATGTACTATTACTGCTGATAATGGTATCTTATGATCATGAGGTGGCAAAAAGAAAACCATCAGAAGATTGTTTGGTGGCAA

mRNA sequence

TGTTTCAACTATTTTTGAAAATGAGTGCTGCGAGACAAACCTATTATAATCTGTTTCTATAACAATTTCCCAAACAAAACCTACACATTGTCAGCCGTTGCCCCGCTGCTCAGTCTCCTTCTCCGGTGAGCCTCCAACAGCCACAGGCGGAAGGCAGGACAACTGGATCCCACAGCCCCTCAAACACGCAGCCCTGTCGTCGAGGGTGGTTTAAGTTCACCCATTAATTTGACTTTGCGACGCTAGCGTCACTTCAAACGGCTTCGCCTAGGTCTTGGCAGCATCATTTCTTCTCCGTTAGAGACTCCGGCGCGAACAACAGGTTGTTCAAAACATTTCTGACGTGTGTTTGTCTTGCAGCGCGGCATTTCTGACTTGAGGTTTAGGAGCTTTTTGGAGTGACCGGTTGGTGGCTCTTGGAACTCGAGGAAGTTGGCATTTGCTCAAGAAAGTGAATTTTTGATTGAGAATTGTAGGATTTTTGAACGAGGCCAAATTGAAGTGAGGAAAGCATATAATCCTGGAGAATCGAGTCATTGATGGGGAAGATCAATACACAGCATATAATGCCAACTTAGAGTGTCAGTAGGGGGGACCGTGGAGCAGTTGAAAGCTGTGAACAATTTGGACCAGATCCCATTGCCAAGGGGGCAATTGAAAAGCAAGTGCTTAATAGATTTAATGTTCTTATGGGAAAGGCAGTACCATGAGCGTGAAATGTTGATTTATGGGCAACCTTTTTGTAGTCTATCCACAGTGTTCATCAGATATGAGAGGTTTACAACTTTCCTTGAATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGAACTCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAACGAGTCAATAAGCTTATCTATGTACGTGCCTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATCGTAGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCCATGAACTTGCCCGATGGTATTCAGAGGAGGCGAACTGCTGTCGATGAACTGAACATGCGGAGCATTTTTGAAGAAAATGACGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAGCTGCTCATAGTTTCACCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTGGATCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGAGGATGCGATGATAGAGGATCACGTTGATAAACCTGAACAAAAGGCTTTGAAATTTGAAGGAACTGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGCAGAACTGCAAACGCTATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGTGTTCTCACAGCAGAAAAAGAGGTTGAACGACGTTCTTCGAGTAAGAAAAGGGGGTAATTTTGTCTTCTTTCAAGAATTGTGAGTAATTTGAATTACCAAAACCGTTTGATTTGCAGAGAAATTTAGTGTTATTATATTATGTTGGATTTTAGTTTACCACCACTTTGTATCTGTTAGTATCAGTATAGAATACAATGTCCTCAATTATTATGCAGTACGTGGTTTCATAAATGTCCAAGGATTACTTAGGATTTTACCATATGTCATATCTTTGGCTAGATTAATACTAGACGAAACTTAATTTTATTAAATGTACTATTACTGCTGATAATGGTATCTTATGATCATGAGGTGGCAAAAAGAAAACCATCAGAAGATTGTTTGGTGGCAA

Coding sequence (CDS)

ATGGGCAACCTTTTTGTAGTCTATCCACAGTGTTCATCAGATATGAGAGGTTTACAACTTTCCTTGAATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGAACTCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAACGAGTCAATAAGCTTATCTATGTACGTGCCTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATCGTAGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCCATGAACTTGCCCGATGGTATTCAGAGGAGGCGAACTGCTGTCGATGAACTGAACATGCGGAGCATTTTTGAAGAAAATGACGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAGCTGCTCATAGTTTCACCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTGGATCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGAGGATGCGATGATAGAGGATCACGTTGATAAACCTGAACAAAAGGCTTTGAAATTTGAAGGAACTGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGCAGAACTGCAAACGCTATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGTGTTCTCACAGCAGAAAAAGAGGTTGAACGACGTTCTTCGAGTAAGAAAAGGGGGTAA

Protein sequence

MGNLFVVYPQCSSDMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG

Homology

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BLAST of MELO3C008880 vs. NCBI nr
Match: XP_008442058.1 (PREDICTED: exosome complex component RRP4 homolog isoform X1 [Cucumis melo] >XP_008442060.1 PREDICTED: exosome complex component RRP4 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 662.5 bits (1708), Expect = 1.9e-186
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MGNLFVVYPQCSSDMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNY 60
           MGNLFVVYPQCSSDMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNY
Sbjct: 1   MGNLFVVYPQCSSDMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNY 60

Query: 61  EDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKR 120
           EDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKR
Sbjct: 61  EDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKR 120

Query: 121 WRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHL 180
           WRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHL
Sbjct: 121 WRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHL 180

Query: 181 QARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDA 240
           QARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDA
Sbjct: 181 QARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDA 240

Query: 241 MIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVN 300
           MIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVN
Sbjct: 241 MIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVN 300

Query: 301 LSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG 337
           LSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 LSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG 336

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BLAST of MELO3C008880 vs. NCBI nr
Match: XP_008442061.1 (PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_008442062.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_008442063.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_008442064.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >TYK05388.1 exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 632.1 bits (1629), Expect = 2.7e-177
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 75  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 134
           GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM
Sbjct: 61  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 135 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 194
           LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 180

Query: 195 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL 254
           LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL
Sbjct: 181 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL 240

Query: 255 KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG 314
           KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Sbjct: 241 KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG 300

Query: 315 SEFCVLTAEKEVERRSSSKKRG 337
           SEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 SEFCVLTAEKEVERRSSSKKRG 322

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BLAST of MELO3C008880 vs. NCBI nr
Match: KAA0041865.1 (exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 627.5 bits (1617), Expect = 6.7e-176
Identity = 322/323 (99.69%), Postives = 322/323 (99.69%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 75  GEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL 134
           GEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL
Sbjct: 61  GEVVASICGVVERVNKLIYVRALRARLYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL 120

Query: 135 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG 194
           MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG
Sbjct: 121 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG 180

Query: 195 QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA 254
           QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA
Sbjct: 181 QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA 240

Query: 255 LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML 314
           LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
Sbjct: 241 LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML 300

Query: 315 GSEFCVLTAEKEVERRSSSKKRG 337
           GSEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 GSEFCVLTAEKEVERRSSSKKRG 323

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BLAST of MELO3C008880 vs. NCBI nr
Match: XP_031740749.1 (exosome complex component RRP4 homolog [Cucumis sativus] >XP_031740750.1 exosome complex component RRP4 homolog [Cucumis sativus] >XP_031740751.1 exosome complex component RRP4 homolog [Cucumis sativus] >XP_031740752.1 exosome complex component RRP4 homolog [Cucumis sativus] >KGN55395.2 hypothetical protein Csa_012890 [Cucumis sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 8.0e-169
Identity = 313/327 (95.72%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN
Sbjct: 1   MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 75  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 134
           GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINY QDAVLM
Sbjct: 61  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLM 120

Query: 135 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 194
           LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 180

Query: 195 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPK-EDAMIEDHVDKPEQKA 254
           LL VSPYLIKRRKQHFHHL+QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK 
Sbjct: 181 LLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKG 240

Query: 255 LKFEGT----VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV 314
            KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Sbjct: 241 SKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV 300

Query: 315 HEMLGSEFCVLTAEKEVERRSSSKKRG 337
           HEMLGSEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 HEMLGSEFCVLTAEKEVERRSSSKKRG 327

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BLAST of MELO3C008880 vs. NCBI nr
Match: XP_038882864.1 (exosome complex component RRP4 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 583.9 bits (1504), Expect = 8.6e-163
Identity = 296/328 (90.24%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 14  DMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDL 73
           DMRGLQ+SLNHTQKIRL+RAQERL+SLSSK NSDASV+VADTIPLNYEDGVLKGHGTLDL
Sbjct: 37  DMRGLQISLNHTQKIRLQRAQERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDL 96

Query: 74  NGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL 133
           NGEV+A+ICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL
Sbjct: 97  NGEVIATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL 156

Query: 134 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG 193
           MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG
Sbjct: 157 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG 216

Query: 194 QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA 253
           QLL V  YL+KRRKQHFHHL+QYGIDLILGCNGFIWIGEHVDP ED MI+D ++K EQK 
Sbjct: 217 QLLTVPSYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMIDDQINKSEQKG 276

Query: 254 LKFEGTV-----QEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID 313
            KFEGT      Q VYTPLETRQNICRTANAIRVLS LGFIMTVEVIMEIV+LSIS+NID
Sbjct: 277 PKFEGTFENQVQQRVYTPLETRQNICRTANAIRVLSILGFIMTVEVIMEIVSLSISMNID 336

Query: 314 VHEMLGSEFCVLTAEKEVERRSSSKKRG 337
           VHEMLGSEFCVLTAEKEVERR+SSKKRG
Sbjct: 337 VHEMLGSEFCVLTAEKEVERRTSSKKRG 364

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BLAST of MELO3C008880 vs. ExPASy Swiss-Prot
Match: Q9ZVT7 (Exosome complex component RRP4 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP4 PE=1 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.8e-118
Identity = 213/322 (66.15%), Postives = 263/322 (81.68%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MR LQL L+ TQK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++
Sbjct: 3   MRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62

Query: 75  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 134
           GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV EVA KRWR+++N++QD VLM
Sbjct: 63  GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLM 122

Query: 135 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERG 194
           LSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182

Query: 195 QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA 254
           QLL V PYL+KR K HFH+++  GIDLI+GCNGFIW+GEHV+ ++   I+D   K E+  
Sbjct: 183 QLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDD--QKDEEMI 242

Query: 255 LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML 314
                  ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID+H+ML
Sbjct: 243 SSSSTGKEQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNIDIHDML 302

Query: 315 GSEFCVLTAEKEVERRSSSKKR 336
           GSEF V+ AE E ERR + +K+
Sbjct: 303 GSEFHVVVAENEAERRRTKRKK 322

[Close]

BLAST of MELO3C008880 vs. ExPASy Swiss-Prot
Match: Q8VBV3 (Exosome complex component RRP4 OS=Mus musculus OX=10090 GN=Exosc2 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.2e-47
Identity = 111/218 (50.92%), Postives = 144/218 (66.06%), Query Frame = 0


Query: 27  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVE 86
           ++RL +A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VE
Sbjct: 4   EMRLPKARKPLSESLGRDSKKHLVVPGDTI--TTDTGFMRGHGTYMGEEKLIASVAGSVE 63

Query: 87  RVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQR 146
           RVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N   D+VL+LSSMNLP G  R
Sbjct: 64  RVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELR 123

Query: 147 RRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKR 206
           RR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR
Sbjct: 124 RRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKR 183

Query: 207 RKQHFHHLDQYGIDLILGCNGFIWI---GEHVDPKEDA 241
           +K HFH L   G  +ILG NGFIWI    EH D  EDA
Sbjct: 184 QKTHFHDL-PCGASVILGNNGFIWIYPTPEHKD--EDA 216

[Close]

BLAST of MELO3C008880 vs. ExPASy Swiss-Prot
Match: Q2KID0 (Exosome complex component RRP4 OS=Bos taurus OX=9913 GN=EXOSC2 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-46
Identity = 107/214 (50.00%), Postives = 141/214 (65.89%), Query Frame = 0


Query: 27  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVE 86
           ++RL  A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VE
Sbjct: 4   EMRLPVARKPLSESLGRESKKHLVVPGDTI--TTDTGFMRGHGTYMGEEKLIASVAGSVE 63

Query: 87  RVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQR 146
           RVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N   D+VL+LSSMNLP G  R
Sbjct: 64  RVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELR 123

Query: 147 RRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKR 206
           RR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR
Sbjct: 124 RRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKR 183

Query: 207 RKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKED 240
           +K HFH L   G  +ILG NGFIW+    + KED
Sbjct: 184 QKTHFHDL-PCGASVILGNNGFIWVYPTPEHKED 214

[Close]

BLAST of MELO3C008880 vs. ExPASy Swiss-Prot
Match: Q13868 (Exosome complex component RRP4 OS=Homo sapiens OX=9606 GN=EXOSC2 PE=1 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 5.2e-46
Identity = 107/214 (50.00%), Postives = 140/214 (65.42%), Query Frame = 0


Query: 27  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVE 86
           ++RL  A++ L     +      VV  DTI    + G ++GHGT     +++AS+ G VE
Sbjct: 4   EMRLPVARKPLSERLGRDTKKHLVVPGDTI--TTDTGFMRGHGTYMGEEKLIASVAGSVE 63

Query: 87  RVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQR 146
           RVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N   D+VL+LSSMNLP G  R
Sbjct: 64  RVNKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELR 123

Query: 147 RRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKR 206
           RR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR
Sbjct: 124 RRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKR 183

Query: 207 RKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKED 240
           +K HFH L   G  +ILG NGFIWI    + KE+
Sbjct: 184 QKTHFHDL-PCGASVILGNNGFIWIYPTPEHKEE 214

[Close]

BLAST of MELO3C008880 vs. ExPASy Swiss-Prot
Match: Q09704 (Exosome complex component rrp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp4 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.9e-44
Identity = 102/252 (40.48%), Postives = 155/252 (61.51%), Query Frame = 0


Query: 65  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLD 124
           ++GHGT   +G + AS+ G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++D
Sbjct: 71  MRGHGTYFEDGGIYASVAGSVQRVNKLISVKPLRSKYVPEIGDLIIGKIAEVQPKRWKVD 130

Query: 125 INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQAR 184
           I   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D++ AEV+    DG + +  R
Sbjct: 131 IGAKQNAVLMLSSINLPGGIQRRKLETDELQMRSFFQEGDLLVAEVQQYFSDGSVSIHTR 190

Query: 185 SQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIE 244
           S KYGKL  G  L V P L+ R K H + L   G+D+IL  NG++W+ +H + +  ++  
Sbjct: 191 SLKYGKLRNGVFLKVPPALVVRSKSHAYAL-AGGVDIILSVNGYVWVSKHNENQHSSVSI 250

Query: 245 DHVDKPEQKAL-KFEGTVQEVYTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIM 304
             +++   +++   E    + YT L  +R +IC    A R L     S   F  +  V  
Sbjct: 251 TRLEEEASESIYSNENDEIDGYTRLNISRVSICIKGLASRSLPLTQASITNFYESSLVFS 310

Query: 305 EIVNLSISLNID 309
            + +L++  N+D
Sbjct: 311 NLQDLTVPKNMD 321

[Close]

BLAST of MELO3C008880 vs. ExPASy TrEMBL
Match: A0A1S3B5H2 (exosome complex component RRP4 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486036 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 9.2e-187
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MGNLFVVYPQCSSDMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNY 60
           MGNLFVVYPQCSSDMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNY
Sbjct: 1   MGNLFVVYPQCSSDMRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNY 60

Query: 61  EDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKR 120
           EDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKR
Sbjct: 61  EDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKR 120

Query: 121 WRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHL 180
           WRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHL
Sbjct: 121 WRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHL 180

Query: 181 QARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDA 240
           QARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDA
Sbjct: 181 QARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDA 240

Query: 241 MIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVN 300
           MIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVN
Sbjct: 241 MIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVN 300

Query: 301 LSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG 337
           LSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 LSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG 336

[Close]

BLAST of MELO3C008880 vs. ExPASy TrEMBL
Match: A0A1S3B4T9 (exosome complex component RRP4 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486036 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.3e-177
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 75  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 134
           GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM
Sbjct: 61  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 135 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 194
           LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 180

Query: 195 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL 254
           LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL
Sbjct: 181 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL 240

Query: 255 KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG 314
           KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Sbjct: 241 KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG 300

Query: 315 SEFCVLTAEKEVERRSSSKKRG 337
           SEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 SEFCVLTAEKEVERRSSSKKRG 322

[Close]

BLAST of MELO3C008880 vs. ExPASy TrEMBL
Match: A0A5D3C2G3 (Exosome complex component RRP4-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00630 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.3e-177
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 75  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 134
           GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM
Sbjct: 61  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 135 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 194
           LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 180

Query: 195 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL 254
           LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL
Sbjct: 181 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL 240

Query: 255 KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG 314
           KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Sbjct: 241 KFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG 300

Query: 315 SEFCVLTAEKEVERRSSSKKRG 337
           SEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 SEFCVLTAEKEVERRSSSKKRG 322

[Close]

BLAST of MELO3C008880 vs. ExPASy TrEMBL
Match: A0A5A7TKA1 (Exosome complex component RRP4-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G002510 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.3e-176
Identity = 322/323 (99.69%), Postives = 322/323 (99.69%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 75  GEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL 134
           GEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL
Sbjct: 61  GEVVASICGVVERVNKLIYVRALRARLYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVL 120

Query: 135 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG 194
           MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG
Sbjct: 121 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERG 180

Query: 195 QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA 254
           QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA
Sbjct: 181 QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA 240

Query: 255 LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML 314
           LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
Sbjct: 241 LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML 300

Query: 315 GSEFCVLTAEKEVERRSSSKKRG 337
           GSEFCVLTAEKEVERRSSSKKRG
Sbjct: 301 GSEFCVLTAEKEVERRSSSKKRG 323

[Close]

BLAST of MELO3C008880 vs. ExPASy TrEMBL
Match: A0A6J1K7S0 (exosome complex component RRP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490943 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.5e-157
Identity = 289/327 (88.38%), Postives = 306/327 (93.58%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MRGLQ+SLN TQKIRL+RA E L+S+SSK NSDASVVVADTIPLNYEDGVLKGHGTLDL 
Sbjct: 1   MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLY 60

Query: 75  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 134
           GEVVA+ICGVVERVNKLIYVRALRARYKPEVGDI+VGRVTEVAPKRWRLDINYSQDAVLM
Sbjct: 61  GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 135 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 194
           LSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 195 LLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL 254
           LL VSPYL+KRRKQHFHHL+QYGIDLILGCNGFIWIGEHVDP ED M+ED ++K EQK  
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGS 240

Query: 255 KFEGT----VQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV 314
           KFEG+    VQE +YTPLETRQNICRTANAIRVLS LGFIM+VEVIME V+LSISLNIDV
Sbjct: 241 KFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV 300

Query: 315 HEMLGSEFCVLTAEKEVERRSSSKKRG 337
           HEMLGSEFCVLTAEKE ERR+SSKKRG
Sbjct: 301 HEMLGSEFCVLTAEKEAERRTSSKKRG 327

[Close]

BLAST of MELO3C008880 vs. TAIR 10
Match: AT1G03360.1 (ribosomal RNA processing 4 )

HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-119
Identity = 213/322 (66.15%), Postives = 263/322 (81.68%), Query Frame = 0


Query: 15  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 74
           MR LQL L+ TQK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++
Sbjct: 3   MRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62

Query: 75  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLM 134
           GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV EVA KRWR+++N++QD VLM
Sbjct: 63  GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLM 122

Query: 135 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERG 194
           LSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182

Query: 195 QLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKA 254
           QLL V PYL+KR K HFH+++  GIDLI+GCNGFIW+GEHV+ ++   I+D   K E+  
Sbjct: 183 QLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDD--QKDEEMI 242

Query: 255 LKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML 314
                  ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID+H+ML
Sbjct: 243 SSSSTGKEQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNIDIHDML 302

Query: 315 GSEFCVLTAEKEVERRSSSKKR 336
           GSEF V+ AE E ERR + +K+
Sbjct: 303 GSEFHVVVAENEAERRRTKRKK 322

The following BLAST results are available for this feature:

BLAST of MELO3C008880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442058.1	1.9e-186	100.00	PREDICTED: exosome complex component RRP4 homolog isoform X1 [Cucumis melo] >XP_...	[more]
XP_008442061.1	2.7e-177	100.00	PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_...	[more]
KAA0041865.1	6.7e-176	99.69	exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa...	[more]
XP_031740749.1	8.0e-169	95.72	exosome complex component RRP4 homolog [Cucumis sativus] >XP_031740750.1 exosome...	[more]
XP_038882864.1	8.6e-163	90.24	exosome complex component RRP4 homolog isoform X1 [Benincasa hispida]	[more]

BLAST of MELO3C008880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVT7	1.8e-118	66.15	Exosome complex component RRP4 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP4 P...	[more]
Q8VBV3	6.2e-47	50.92	Exosome complex component RRP4 OS=Mus musculus OX=10090 GN=Exosc2 PE=1 SV=1	[more]
Q2KID0	1.0e-46	50.00	Exosome complex component RRP4 OS=Bos taurus OX=9913 GN=EXOSC2 PE=2 SV=1	[more]
Q13868	5.2e-46	50.00	Exosome complex component RRP4 OS=Homo sapiens OX=9606 GN=EXOSC2 PE=1 SV=2	[more]
Q09704	2.9e-44	40.48	Exosome complex component rrp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of MELO3C008880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B5H2	9.2e-187	100.00	exosome complex component RRP4 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3B4T9	1.3e-177	100.00	exosome complex component RRP4 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3C2G3	1.3e-177	100.00	Exosome complex component RRP4-like protein isoform X2 OS=Cucumis melo var. maku...	[more]
A0A5A7TKA1	3.3e-176	99.69	Exosome complex component RRP4-like protein isoform X2 OS=Cucumis melo var. maku...	[more]
A0A6J1K7S0	1.5e-157	88.38	exosome complex component RRP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114909...	[more]

BLAST of MELO3C008880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03360.1	1.2e-119	66.15	ribosomal RNA processing 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..43
None	No IPR available	GENE3D	2.40.50.100		coord: 50..101 e-value: 1.8E-17 score: 64.6
None	No IPR available	GENE3D	2.40.50.140		coord: 102..191 e-value: 5.5E-19 score: 69.9
None	No IPR available	PANTHER	PTHR21321:SF4	EXOSOME COMPLEX COMPONENT RRP4	coord: 25..331
None	No IPR available	CDD	cd05789	S1_Rrp4	coord: 100..190 e-value: 2.04695E-33 score: 116.88
None	No IPR available	SUPERFAMILY	110324	Ribosomal L27 protein-like	coord: 58..96
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 104..183 e-value: 1.2E-4 score: 31.5
IPR004088	K Homology domain, type 1	PFAM	PF15985	KH_6	coord: 193..233 e-value: 5.3E-11 score: 42.8
IPR026699	Exosome complex RNA-binding protein 1/RRP40/RRP4	PANTHER	PTHR21321	PNAS-3 RELATED	coord: 25..331
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 99..190
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 193..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008880.1	MELO3C008880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000178	exosome (RNase complex)
molecular_function	GO:0003723	RNA binding