MELO3C008779 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008779
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	LOB domain-containing protein
Location	chr05: 19496762 .. 19497424 (-)
RNA-Seq Expression	MELO3C008779
Synteny	MELO3C008779

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGAGTTCCTCGAATTCCCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAACCGGAATGTGTTTTTGCGCCGTATTTTCCTCCGGATCAGCCACAGAAATTCGCAAATGTTCATAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTATGGCTGTGTAGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGGTAACCACGCCACCCTGATTTCACCGCCTTCCGCCCTTTCTACCGTACCTCATGGACAGAGAAACCACCAGCCAGCGTTCAATTTTGCTCGAGATCAACCGCACAGCCTTTATCACGATCAATTTTTCCCTCGAGATCAACAACAACAACAACAACAGATGATGCTCCGAAGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCTGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

mRNA sequence

ATGGCTTCGAGTTCCTCGAATTCCCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAACCGGAATGTGTTTTTGCGCCGTATTTTCCTCCGGATCAGCCACAGAAATTCGCAAATGTTCATAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTATGGCTGTGTAGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGAGAAACCACCAGCCAGCGTTCAATTTTGCTCGAGATCAACCGCACAGCCTTTATCACGATCAATTTTTCCCTCGAGATCAACAACAACAACAACAACAGATGATGCTCCGAAGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCTGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

Coding sequence (CDS)

ATGGCTTCGAGTTCCTCGAATTCCCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAACCGGAATGTGTTTTTGCGCCGTATTTTCCTCCGGATCAGCCACAGAAATTCGCAAATGTTCATAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTATGGCTGTGTAGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGAGAAACCACCAGCCAGCGTTCAATTTTGCTCGAGATCAACCGCACAGCCTTTATCACGATCAATTTTTCCCTCGAGATCAACAACAACAACAACAACAGATGATGCTCCGAAGGAACTTCGACGGCGGTAG

Protein sequence

MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIEKPPASVQFCSRSTAQPLSRSIFPSRSTTTTTTDDAPKELRRR

Homology

[Close]

BLAST of MELO3C008779 vs. NCBI nr
Match: XP_008441920.1 (PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441922.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 117

[Close]

BLAST of MELO3C008779 vs. NCBI nr
Match: XP_004152887.1 (protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >KGN61226.1 hypothetical protein Csa_006748 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 117

[Close]

BLAST of MELO3C008779 vs. NCBI nr
Match: KAA0047653.1 (LOB domain-containing protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 117

[Close]

BLAST of MELO3C008779 vs. NCBI nr
Match: XP_022149820.1 (LOB domain-containing protein 6 isoform X1 [Momordica charantia])

HSP 1 Score: 244.6 bits (623), Expect = 5.9e-61
Identity = 120/132 (90.91%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 17  MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 76

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIEKP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI   
Sbjct: 77  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 136

Query: 121 PASVQFCSRSTA 133
            A +   S + A
Sbjct: 137 AALISPPSAAVA 148

[Close]

BLAST of MELO3C008779 vs. NCBI nr
Match: XP_022149821.1 (LOB domain-containing protein 6 isoform X2 [Momordica charantia])

HSP 1 Score: 244.6 bits (623), Expect = 5.9e-61
Identity = 120/132 (90.91%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIEKP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 PASVQFCSRSTA 133
            A +   S + A
Sbjct: 121 AALISPPSAAVA 132

[Close]

BLAST of MELO3C008779 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.6e-59
Identity = 110/117 (94.02%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI 117

[Close]

BLAST of MELO3C008779 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.3e-49
Identity = 93/112 (83.04%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 2   ASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A   + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP Q
Sbjct: 26  AVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQ 85

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQ 114
           REDAVNSLAYEADMRLRDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ
Sbjct: 86  REDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQ 137

[Close]

BLAST of MELO3C008779 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.5e-48
Identity = 92/122 (75.41%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 2   ASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIEKPP 121
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ        
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 122 AS 124
           AS
Sbjct: 151 AS 152

[Close]

BLAST of MELO3C008779 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.5e-48
Identity = 92/122 (75.41%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 2   ASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIEKPP 121
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ        
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 122 AS 124
           AS
Sbjct: 151 AS 152

[Close]

BLAST of MELO3C008779 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-47
Identity = 88/108 (81.48%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQ 114
           +NSLAYEADMR+RDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQ 137

[Close]

BLAST of MELO3C008779 vs. ExPASy TrEMBL
Match: A0A1S3B5A0 (LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 117

[Close]

BLAST of MELO3C008779 vs. ExPASy TrEMBL
Match: A0A5A7TVS1 (LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001440 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 117

[Close]

BLAST of MELO3C008779 vs. ExPASy TrEMBL
Match: A0A0A0LML7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 117

[Close]

BLAST of MELO3C008779 vs. ExPASy TrEMBL
Match: A0A6J1D6T8 (LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.8e-61
Identity = 120/132 (90.91%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 17  MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 76

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIEKP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI   
Sbjct: 77  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 136

Query: 121 PASVQFCSRSTA 133
            A +   S + A
Sbjct: 137 AALISPPSAAVA 148

[Close]

BLAST of MELO3C008779 vs. ExPASy TrEMBL
Match: A0A6J1D9K0 (LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.8e-61
Identity = 120/132 (90.91%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIEKP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 PASVQFCSRSTA 133
            A +   S + A
Sbjct: 121 AALISPPSAAVA 132

[Close]

BLAST of MELO3C008779 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-60
Identity = 110/117 (94.02%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI 117

[Close]

BLAST of MELO3C008779 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-60
Identity = 110/117 (94.02%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI 117

[Close]

BLAST of MELO3C008779 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-60
Identity = 110/117 (94.02%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI 117

[Close]

BLAST of MELO3C008779 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-60
Identity = 110/117 (94.02%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI 118
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI 117

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BLAST of MELO3C008779 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 179.1 bits (453), Expect = 2.8e-45
Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 1   MASSSS--NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 60
           MASSS+  NSPCAACKFLRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKY 113
           PHQREDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+ +LQ +L  A ++L+ Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

The following BLAST results are available for this feature:

BLAST of MELO3C008779 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441920.1	3.4e-61	100.00	PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDIC...	[more]
XP_004152887.1	3.4e-61	100.00	protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC...	[more]
KAA0047653.1	3.4e-61	100.00	LOB domain-containing protein 6 [Cucumis melo var. makuwa]	[more]
XP_022149820.1	5.9e-61	90.91	LOB domain-containing protein 6 isoform X1 [Momordica charantia]	[more]
XP_022149821.1	5.9e-61	90.91	LOB domain-containing protein 6 isoform X2 [Momordica charantia]	[more]

BLAST of MELO3C008779 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04479	2.6e-59	94.02	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	5.3e-49	83.04	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A2WXT0	4.5e-48	75.41	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	4.5e-48	75.41	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]
A1YKY7	1.0e-47	81.48	Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1	[more]

BLAST of MELO3C008779 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B5A0	1.7e-61	100.00	LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=...	[more]
A0A5A7TVS1	1.7e-61	100.00	LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0LML7	1.7e-61	100.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV...	[more]
A0A6J1D6T8	2.8e-61	90.91	LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1D9K0	2.8e-61	90.91	LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of MELO3C008779 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65620.1	1.8e-60	94.02	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	1.8e-60	94.02	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	1.8e-60	94.02	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	1.8e-60	94.02	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	2.8e-45	74.56	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 9..106 e-value: 1.8E-43 score: 147.1
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 8..109 score: 27.115797
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..160
None	No IPR available	PANTHER	PTHR31301:SF76	LOB DOMAIN-CONTAINING PROTEIN 6-LIKE	coord: 3..117
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 3..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008779.1	MELO3C008779.1	mRNA