MELO3C008774 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008774
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RNA polymerase II transcription factor B subunit 4
Location	chr05: 19354913 .. 19359469 (+)
RNA-Seq Expression	MELO3C008774
Synteny	MELO3C008774

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCAATGGGCCAATTTGTACTTTTTGGGCCCAAATCTCATTCAGTTCTATTGGGAGCCGAACTGAGCGTCTTCTCTCCGTTGCCCATTCTGAAGCAGCCATGGCTTCAGCTCCTTCGAAGCTCTACGCAGGTTCTCCTCCAATCCCTTTCTCCTTCCTTATGGGCACTCGGGTACAACTATCGGAATTGCAGTGGCTTATTCGTTTTTGTGATCTTTTAATTGTGTTGTTACAGATGATGTTAGCCTTCTAGTGGTTTTACTGGATACGAATCCATTTTTCTGGAGCACATCTTCTCTTCCGTTCTCCAAGTTTCTGTCTCATGTAATTGATAAATTATCTCTTTTCCTGCGAACCATTCTACCCAGTAGGTCTTTCGGATAGAACTGTAATGAACATTAGTATTTTCTTTTTCTTTCTGTTTTGGGTGTATAGGTACTTGCTTTTCTGAACTCCATTTTAGTACTGAACCAACTTAATGAGGTTGTGGTTATTGGTACTGGATACGCTTCATGCAAGTATTTATACAACTCGTCTTCTTACTCAAATCATGGCCTTGAAGATGGTAGAATGCCTGCACTTTGTACTCGTTTATTGAAGAATTTGGAGGAGTTTGTGATTGGGGATGAGCAGTCCATCAAGGAAGATCCCAAAGGAGGGACAATGTCTTCACTTCTTTCTGGATCGCTCTCCATGGCCTTGTGTTGTATCCTTGTTGATGATTGTTGGTGCTGATTATTTGCTTGTTTATGCTCATAAGTAAAGCTCGCCATCAATTCATTAACTCGAGCTTATGAGGAAAAGTCTAGACTCTACATCCCCATGTTCTACAATTAGAATGTTTCAATAGGCCATTAATTTAGCAGTCAGGACTAAACAGTATCTATTGTGATGGGAGTGGCATTTGGTCGAAATTTGTAGTAATGAGTATGGTTGCAAAATGTTGTAAGAGTTATGATTGGCACGATGGAATTTTCTAATAGCCATACTGTTTAAATGTAACTTGAGTAATTTAAGATTCATCAACAGTCTGTTATGCTCCAAATGCTTGACCTTGTGATTAGATATACAGAAAGTTTTCCGCTCTGGATCTCTCCATCCCCAACCACGAGTAAGCATTTGTTTCTGTTCTGCATAATTTATTCCCAGTTTGCATATCCTGATTTTTTTTGTTGCTTACATATACTATTTGTTTTTTTTTCCTTTTTTGAAAATGTGACTAATCTATGTGAATATATTTTACTTTGAGCGTAGATCCTTTGCTTGCAGGGATCCCCAGATGGTCCTGAACAGTAAGATTATTTTCTTTATTCTCTAAAAATATGTATACATTTCTAATGAATTTATTTTATTTGTGCAATTTTCTTTAGTAATGGGAAACAAACTTTAAAATCTTTCTTCTAGTGACTGTTTTTCTCTTCCAGATATGTTGCAATCATGAATGCCATCTTTTCTGCTCAGCGTTCAATGGTTTGTATTTTTTGTTCACGCTTCTGTGTGTTCTTATATGACTTTACTAACTTCTTCCATCAATCACAAACTCTCATAATTTGAACTGGGTGATATCAGTAAGTAATGAAAATGTGGCAACAAGTATTTCATGGAAATGCTCGAGACAAGTTTCCTCTATTTAACTTGGTCTTTGTTTGGTTTTGATGGCAGAAAATGGTGCTGGATTAAACCTTTTTGTTCGTATCTTTTCCTATATGAATTTAAAGATATCAATTATTTCTTCTCCTATTTCGAGATATCCCATTTGTCCCACAGGCGAATTTGAATTTGAATGCATTGACAAGACTAAGTAATTTATATTGATCTACTTTCTTGGAGTCCACAACTGAATATCTAGTCTCTACCGTTAGAGTTGAACTCCAATATTCGGAATAAGTTTTATTATTTAATTTGCTTGCCCTGTGGATGGAAAGTTGATGGATCTCTGGCATATTTTCTATTATTAGTCTTGTCAGATTCAATTGTGAAAGTTTTCATGTTTATATGCATGCATGTAAGTGTATGTATAGAATAAGAAACAAGAACAAAGCTAGAAAGCAAAGATTCCTTAGAAAGGACAAGGGGAGAATTGGGAGTTTCCCCGAAGGAACAGATTCTGGGATAGAAGTTTATAAGAAAAACTTCAGTCCAAGTTATCGATAGAGTAGAGAAGTGGCAAAACCCTTATGTAAGGTACTCCAATTTAAGGCTTTAACTATACAAGCTCCAAAAGTTAGCAGAAAAGTCCTGAAAAAACCAATAAAGAGATTTATTTTACAATTGGAAAAATTATAAATAGAGATGCACTTTTAAATTTCTCTCTCCAACAACACATCAAATTCGAAGGTGAAAACTGTTTTAGATTTTGAATTGCTAGTTTTCTTTTTCGTTATGACAGCTTAACATAACAATATTGACCAAAGTATGATTAATTTCTTGATGTGAAGTAATTACATCTGCAATGTTCATGATAGTGGTAATCATTTGGTAACAAGCACAAAGTTGGTAGTCAATGAGATTGAAGAAATGTGAATCTAATCTCCATTCACATTTTCATCTATGGGTTTGCTTTAAACTTTTATGTGCGCTAGTCACTCATTTGAAGTCCACAGCTGTCCGTTTTCCGCTTCATGTTGCTTTTAACTATAAACTACATTCAACATTCAACCATGTTTCCGTTTGTATAAGTATCCTATGATGTACAATTTTATCATTCTTGCTTCAGGTTTCTATAGATTCATGTTACATTGGTTCACACAATTCTGCATTTCTTCAGCAGGTAAGCTAACTGCACATTGTTCTTAATAGGGTTTTTACTTTTCCTGGAATCTTACCATCTCCGGATGTATCATCTATTCATTGCTGCTGATGATTTGATTTCTGATGCTAGGCCTCTTACATAACGGGTGGAGTTTATCTGAAGCCTCAGCAAATGGATGGGCTGTTTCAGTATCTCGCTGTAGGTTTTATTTTCCTATGTGCTTTTATTGATCATGGTCTGGCCGTTCCGCGGGGTGGGGGGGGTGGTCCTTGTTTTTTGTAATTTCTTGCTTAGGCTGATGTGATATTCTATCGTTATTTTTCTGCAGACTGTTTTTGGCACTGATTTGCATTCCCGGACCTTCTTACAGCTTCCAAAATCCGTTGGTGTTGATTTTCGTGCATCGTAAGTCTGCAGTCTTGTGAATACACAATTCTGTTGTTTTGTGCTTATTATTTTGTGTGGCTTACTATGGCCTTCTACCTATTTACACCTCTCATCATCATTTTGTCCTCTCGGAATCCAACAGAGATGGAAATTGCTAATTCCAAATAAATTGGGAATTTGCAGGTGTTTTTGCCATAAAAAAACGATCGACATGGGCTATGTCTGTTCTGTTTGTTTATCTATATTCTGCAAGCATCACAAGAAATGTTCTACCTGTGGGTAAGCGAAAGGTCAAGCCCCTTTTATATGTGGTTTCCTAAATTTTATTGAAGGTAGTTTGACATTGACTTTCGAGAATGCTGTTGTCTGTTTGGCTTTATAAGTATGAAAAGGAAGATGAAGAGGAACCTGATTTTTGAGAACTCATTATGCTAGGGCTTTTTCCTTGACGGTTTATATAACACTTCGGTGTGACTTGATGTCATGACACAAGGGGGGAGCTTTGTAGCTTAGTATTGCCCCTAGATAATGGTTGCCTAAATATGATGCTAAAAGATTCTACCACGCCTTTAGTTTCTTACGGGGTGTTTGAAAAACCGGAATGTAATTAGAATCACAGAAAATTAGAGGGGTGTTGGAAAGCGTGTTGAATTGAGGGCAAAACAAAGAATGGGGTCGTAAAGCGCAAAGACCCTTCTGAAATGCTCAAAAAACTTACATTGTTGTTTGCCTACTGTCACTTTTGTCTTACTTCAGAACAAGATTGAATGTATTAATATTAATGAGTTTCAATTTCTTTCAGGTCAGTTTTTGGTGAGACACCTGTAGAACTCGATTCATTGTCTAAACTGAAAAGAAAAACTCCAGAATGATATGACTTTGAACCATTTGTTTTCACTTCTATGGCTATAGAAATTGTTCCATTTTTCTTCCCTTTCTTGAAGCTGTTGGAAAGTGGAATTCATTTGGTTCACTTGGCACGAACGGAGATGACTTAAATGAAACAGTTGCTGAAAGAGTCAATCTCAACATTGTACAATTCATATCAATAGTGGTCGAATTCGGAGGGGATAACATGGAACGATGGTTAGCAAGGTCACGCATTATTCCAGTCTGATACAAATTGGGTACAAGGTTTTTATGGAACTTGAGACTTTAACTGGAAAAGTTAGATTAATGTAATTGTACTGAAAGCTTGAGTGGTTTATAAGCACATGTAGATTTAGATTTCGCTCACGCTTGACAGTATTCCAAAGCTTACCTTTGCAAAAGTAGACAAGGATACGGACAGTCACATTGTTGATTGAGTCGTGTTACTTTGTTTTTTGTGGAACCTCATACTTTGAAATTTTACAAGTTTGAAATGTGCCAAGTGAATCATATAATAAAACAATTTGAGCACACTTGTGAGGCTAG

mRNA sequence

ATTCTCAATGGGCCAATTTGTACTTTTTGGGCCCAAATCTCATTCAGTTCTATTGGGAGCCGAACTGAGCGTCTTCTCTCCGTTGCCCATTCTGAAGCAGCCATGGCTTCAGCTCCTTCGAAGCTCTACGCAGATGATGTTAGCCTTCTAGTGGTTTTACTGGATACGAATCCATTTTTCTGGAGCACATCTTCTCTTCCGTTCTCCAAGTTTCTGTCTCATGTAATTGATAAATTATCTCTTTTCCTGCGAACCATTCTACCCAGTAGGTCTTTCGGATAGAACTGTAATGAACATTAGTATTTTCTTTTTCTTTCTGTTTTGGGTGTATAGGTACTTGCTTTTCTGAACTCCATTTTAGTACTGAACCAACTTAATGAGGTTGTGGTTATTGGTACTGGATACGCTTCATGCAAGTATTTATACAACTCGTCTTCTTACTCAAATCATGGCCTTGAAGATGGTAGAATGCCTGCACTTTGTACTCGTTTATTGAAGAATTTGGAGGAGTTTGTGATTGGGGATGAGCAGTCCATCAAGGAAGATCCCAAAGGAGGGACAATGTCTTCACTTCTTTCTGGATCGCTCTCCATGGCCTTGTGTTATATACAGAAAGTTTTCCGCTCTGGATCTCTCCATCCCCAACCACGAATCCTTTGCTTGCAGGGATCCCCAGATGGTCCTGAACAATATGTTGCAATCATGAATGCCATCTTTTCTGCTCAGCGTTCAATGGTTTCTATAGATTCATGTTACATTGGTTCACACAATTCTGCATTTCTTCAGCAGGCCTCTTACATAACGGGTGGAGTTTATCTGAAGCCTCAGCAAATGGATGGGCTGTTTCAGTATCTCGCTACTGTTTTTGGCACTGATTTGCATTCCCGGACCTTCTTACAGCTTCCAAAATCCGTTGGTGTTGATTTTCGTGCATCGTGTTTTTGCCATAAAAAAACGATCGACATGGGCTATGTCTGTTCTGTTTGTTTATCTATATTCTGCAAGCATCACAAGAAATGTTCTACCTGTGGGTCAGTTTTTGGTGAGACACCTGTAGAACTCGATTCATTGTCTAAACTGAAAAGAAAAACTCCAGAATGATATGACTTTGAACCATTTGTTTTCACTTCTATGGCTATAGAAATTGTTCCATTTTTCTTCCCTTTCTTGAAGCTGTTGGAAAGTGGAATTCATTTGGTTCACTTGGCACGAACGGAGATGACTTAAATGAAACAGTTGCTGAAAGAGTCAATCTCAACATTGTACAATTCATATCAATAGTGGTCGAATTCGGAGGGGATAACATGGAACGATGGTTAGCAAGGTCACGCATTATTCCAGTCTGATACAAATTGGGTACAAGGTTTTTATGGAACTTGAGACTTTAACTGGAAAAGTTAGATTAATGTAATTGTACTGAAAGCTTGAGTGGTTTATAAGCACATGTAGATTTAGATTTCGCTCACGCTTGACAGTATTCCAAAGCTTACCTTTGCAAAAGTAGACAAGGATACGGACAGTCACATTGTTGATTGAGTCGTGTTACTTTGTTTTTTGTGGAACCTCATACTTTGAAATTTTACAAGTTTGAAATGTGCCAAGTGAATCATATAATAAAACAATTTGAGCACACTTGTGAGGCTAG

Coding sequence (CDS)

ATGCCTGCACTTTGTACTCGTTTATTGAAGAATTTGGAGGAGTTTGTGATTGGGGATGAGCAGTCCATCAAGGAAGATCCCAAAGGAGGGACAATGTCTTCACTTCTTTCTGGATCGCTCTCCATGGCCTTGTGTTATATACAGAAAGTTTTCCGCTCTGGATCTCTCCATCCCCAACCACGAATCCTTTGCTTGCAGGGATCCCCAGATGGTCCTGAACAATATGTTGCAATCATGAATGCCATCTTTTCTGCTCAGCGTTCAATGGTTTCTATAGATTCATGTTACATTGGTTCACACAATTCTGCATTTCTTCAGCAGGCCTCTTACATAACGGGTGGAGTTTATCTGAAGCCTCAGCAAATGGATGGGCTGTTTCAGTATCTCGCTACTGTTTTTGGCACTGATTTGCATTCCCGGACCTTCTTACAGCTTCCAAAATCCGTTGGTGTTGATTTTCGTGCATCGTGTTTTTGCCATAAAAAAACGATCGACATGGGCTATGTCTGTTCTGTTTGTTTATCTATATTCTGCAAGCATCACAAGAAATGTTCTACCTGTGGGTCAGTTTTTGGTGAGACACCTGTAGAACTCGATTCATTGTCTAAACTGAAAAGAAAAACTCCAGAATGA

Protein sequence

MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVELDSLSKLKRKTPE

Homology

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BLAST of MELO3C008774 vs. NCBI nr
Match: XP_008441918.2 (PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II transcription factor B subunit 4 [Cucumis melo])

HSP 1 Score: 430.3 bits (1105), Expect = 9.9e-117
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP
Sbjct: 86  MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCH KTIDMGYVCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHXKTIDMGYVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPVELDSLSKLKRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 295

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BLAST of MELO3C008774 vs. NCBI nr
Match: XP_004152842.1 (general transcription and DNA repair factor IIH subunit TFB4 [Cucumis sativus] >XP_011648981.1 general transcription and DNA repair factor IIH subunit TFB4 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 3.8e-116
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP
Sbjct: 86  MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMNAIFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPVELDS+SKLKRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVELDSVSKLKRKTPE 295

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BLAST of MELO3C008774 vs. NCBI nr
Match: XP_038886688.1 (general transcription and DNA repair factor IIH subunit TFB4 [Benincasa hispida] >XP_038886689.1 general transcription and DNA repair factor IIH subunit TFB4 [Benincasa hispida])

HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113
Identity = 201/210 (95.71%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLL NLEEFVI DEQS+KEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP
Sbjct: 86  MPALCTRLLNNLEEFVISDEQSLKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMNAIFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGE+P+ELDS+SK KRKTPE
Sbjct: 266 HKKCSTCGSVFGESPIELDSVSKQKRKTPE 295

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BLAST of MELO3C008774 vs. NCBI nr
Match: KAG6578972.1 (LysM domain-containing GPI-anchored protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 413.7 bits (1062), Expect = 9.6e-112
Identity = 198/210 (94.29%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLL NLEEF+IGDEQSIKEDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP P
Sbjct: 637 MPALCTRLLNNLEEFMIGDEQSIKEDPRGGTMSSLLSGSLSMALCYIQKVFRSGSLHPHP 696

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMN+IFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 697 RILCLQGSPDGPEQYVAIMNSIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 756

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCKH
Sbjct: 757 QMDGLFQYLSTVFATDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGFVCSVCLSIFCKH 816

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPV +DS+SKLKRKTPE
Sbjct: 817 HKKCSTCGSVFGETPVAVDSVSKLKRKTPE 846

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BLAST of MELO3C008774 vs. NCBI nr
Match: XP_023550583.1 (RNA polymerase II transcription factor B subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 9.6e-112
Identity = 198/210 (94.29%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLL NLEEF+IGDEQSIKEDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP P
Sbjct: 86  MPALCTRLLNNLEEFMIGDEQSIKEDPRGGTMSSLLSGSLSMALCYIQKVFRSGSLHPHP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMN+IFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNSIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLSTVFATDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGFVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPV +DS+SKLKRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVAVDSVSKLKRKTPE 295

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BLAST of MELO3C008774 vs. ExPASy Swiss-Prot
Match: Q8LF41 (General transcription and DNA repair factor IIH subunit TFB4 OS=Arabidopsis thaliana OX=3702 GN=TFB4 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-87
Identity = 158/211 (74.88%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTM-SSLLSGSLSMALCYIQKVFRSGSLHPQ 60
           MPA+   LLK LEEFV  DE+  KE+     + S LLSGSLSMALCYIQ+VFRSG LHPQ
Sbjct: 89  MPAIFGSLLKKLEEFVTKDEELSKEEVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQ 148

Query: 61  PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKP 120
           PRILCLQGSPDGPEQYVA+MN+IFSAQR MV IDSCYIG  NSAFLQQASYITGGV+  P
Sbjct: 149 PRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPIDSCYIGVQNSAFLQQASYITGGVHHTP 208

Query: 121 QQMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCK 180
           +Q+DGLFQYL T+F TDLHSR F+QLPK +GVDFRASCFCHKKTIDMGY+CSVCLSIFC+
Sbjct: 209 KQLDGLFQYLTTIFATDLHSRGFVQLPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCE 268

Query: 181 HHKKCSTCGSVFGETPV-ELDSLSKLKRKTP 210
           HHKKCSTCGSVFG++ + +  S S  KRK P
Sbjct: 269 HHKKCSTCGSVFGQSKLDDASSASDKKRKAP 299

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BLAST of MELO3C008774 vs. ExPASy Swiss-Prot
Match: Q86IB5 (General transcription factor IIH subunit 3 OS=Dictyostelium discoideum OX=44689 GN=gtf2h3 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.5e-43
Identity = 84/160 (52.50%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 32  MSSLLSGSLSMALCYIQKVFRSGSLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVS 91
           +SS  S S+S+ALCYI ++ R  +   +PRIL    SPD   QY+++MN IFS+Q+  + 
Sbjct: 186 LSSSFSASMSIALCYINRIKRE-TPTIKPRILVFNISPDVSSQYISVMNCIFSSQKQSIP 245

Query: 92  IDSCYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLATVFGTDLHSRTFLQLPKSVGV 151
           +DSC +   +S FLQQAS++T G+YLKPQ+ + L QYL T F  D  SR  L  P    V
Sbjct: 246 VDSCILSQSDSTFLQQASHLTSGIYLKPQKQELLSQYLLTTFLLDTLSRKSLAYPTLKSV 305

Query: 152 DFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVF 192
           D+RASCFCHK+ +D+GYVCSVCLSIFC H   CSTCG+ F
Sbjct: 306 DYRASCFCHKRIVDIGYVCSVCLSIFCGHSSSCSTCGTKF 344

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BLAST of MELO3C008774 vs. ExPASy Swiss-Prot
Match: Q13889 (General transcription factor IIH subunit 3 OS=Homo sapiens OX=9606 GN=GTF2H3 PE=1 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-37
Identity = 88/204 (43.14%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 8   LLKNLEEFVIGDEQSI--KEDPKGGTMSSLLSGSLSMALCYIQKVFR--SGSLHPQPRIL 67
           LL +  E ++ + + +  K D KG    +LL+GSL+ ALCYI ++ +    +   + RIL
Sbjct: 103 LLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRIL 162

Query: 68  CLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQQMD 127
            ++ + D   QY+  MN IF+AQ+  + ID+C + S +S  LQQA  ITGG+YLK  QM 
Sbjct: 163 VIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDS-DSGLLQQACDITGGLYLKVPQMP 222

Query: 128 GLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKK 187
            L QYL  VF  D   R+ L LP  V VD+RA+CFCH+  I++GYVCSVCLSIFC     
Sbjct: 223 SLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPI 282

Query: 188 CSTCGSVFGETPVELDSLSKLKRK 208
           C+TC + F    + L  + K K+K
Sbjct: 283 CTTCETAF---KISLPPVLKAKKK 302

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BLAST of MELO3C008774 vs. ExPASy Swiss-Prot
Match: Q8VD76 (General transcription factor IIH subunit 3 OS=Mus musculus OX=10090 GN=Gtf2h3 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-37
Identity = 85/186 (45.70%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 24  KEDPKGGTMSSLLSGSLSMALCYIQKVFRS--GSLHPQPRILCLQGSPDGPEQYVAIMNA 83
           K D KG    +LL+GSL+ ALCYI +V ++   +   + RIL ++ + D   QY+  MN 
Sbjct: 122 KSDIKGQHTETLLAGSLAKALCYIHRVNKAVKDNQEMKSRILVIKAAEDSALQYMNFMNV 181

Query: 84  IFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLATVFGTDLHSRT 143
           IF+AQ+  + ID+C + S +S  LQQA  ITGG+YLK  QM  L QYL  VF  D   R+
Sbjct: 182 IFAAQKQNILIDACVLDS-DSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRS 241

Query: 144 FLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVELDSL 203
            L LP  + VD+RA+CFCH+  I++GYVCSVCLSIFC     C+TC + F    + L  +
Sbjct: 242 QLILPPPIHVDYRAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAF---KISLPPV 301

Query: 204 SKLKRK 208
            K K+K
Sbjct: 302 LKAKKK 303

[Close]

BLAST of MELO3C008774 vs. ExPASy Swiss-Prot
Match: Q561R7 (General transcription factor IIH subunit 3 OS=Rattus norvegicus OX=10116 GN=Gtf2h3 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-36
Identity = 84/186 (45.16%), Postives = 115/186 (61.83%), Query Frame = 0


Query: 24  KEDPKGGTMSSLLSGSLSMALCYIQKVFRS--GSLHPQPRILCLQGSPDGPEQYVAIMNA 83
           K D KG    +LL+GSL+ ALCYI +  ++   +   + RIL ++ + D   QY+  MN 
Sbjct: 122 KSDIKGQHTETLLAGSLAKALCYIHRASKAVKDNQEMKSRILVIKAAEDSALQYMNFMNV 181

Query: 84  IFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLATVFGTDLHSRT 143
           IF+AQ+  + ID+C + S +S  LQQA  ITGG+YLK  QM  L QYL  VF  D   R+
Sbjct: 182 IFAAQKQNILIDACVLDS-DSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRS 241

Query: 144 FLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVELDSL 203
            L LP  + VD+RA+CFCH+  I++GYVCSVCLSIFC     C+TC + F    + L  +
Sbjct: 242 QLILPPPIHVDYRAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAF---KISLPPV 301

Query: 204 SKLKRK 208
            K K+K
Sbjct: 302 LKAKKK 303

[Close]

BLAST of MELO3C008774 vs. ExPASy TrEMBL
Match: A0A1S3B4H7 (LOW QUALITY PROTEIN: RNA polymerase II transcription factor B subunit 4 OS=Cucumis melo OX=3656 GN=LOC103485913 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 4.8e-117
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP
Sbjct: 86  MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCH KTIDMGYVCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHXKTIDMGYVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPVELDSLSKLKRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 295

[Close]

BLAST of MELO3C008774 vs. ExPASy TrEMBL
Match: A0A0A0LMM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072450 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.8e-116
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP
Sbjct: 86  MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMNAIFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPVELDS+SKLKRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVELDSVSKLKRKTPE 295

[Close]

BLAST of MELO3C008774 vs. ExPASy TrEMBL
Match: A0A6J1CM09 (RNA polymerase II transcription factor B subunit 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012196 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.6e-112
Identity = 198/210 (94.29%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLLKNLEEFVI DEQS+KEDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP P
Sbjct: 86  MPALCTRLLKNLEEFVIADEQSVKEDPRGGTMSSLLSGSLSMALCYIQKVFRSGSLHPHP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMNAIFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVF TDLHSR FLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLSTVFATDLHSRAFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPV++DS+SK KRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVDVDSVSKQKRKTPE 295

[Close]

BLAST of MELO3C008774 vs. ExPASy TrEMBL
Match: A0A6J1JZK7 (RNA polymerase II transcription factor B subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111489720 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.7e-111
Identity = 196/210 (93.33%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLL NLEEF+IGDEQSIKEDP+ GTMSSLLSGSLSMALCY+QKVFRSGSLHP P
Sbjct: 86  MPALCTRLLNNLEEFMIGDEQSIKEDPREGTMSSLLSGSLSMALCYLQKVFRSGSLHPHP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMN+IFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNSIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLSTVFATDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGFVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDSLSKLKRKTPE 211
           HKKCSTCGSVFGETPV +DS+SKLKRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVAVDSVSKLKRKTPE 295

[Close]

BLAST of MELO3C008774 vs. ExPASy TrEMBL
Match: A0A6J1FJQ6 (RNA polymerase II transcription factor B subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111444867 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.3e-110
Identity = 197/211 (93.36%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQP 60
           MPALCTRLL NLEEF+IGDEQSI+EDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP P
Sbjct: 86  MPALCTRLLNNLEEFMIGDEQSIEEDPRGGTMSSLLSGSLSMALCYIQKVFRSGSLHPHP 145

Query: 61  RILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKPQ 120
           RILCLQGSPDGPEQYVAIMN+IFSAQRSMV IDSCYIGSHNSAFLQQASYITGGVYLKPQ
Sbjct: 146 RILCLQGSPDGPEQYVAIMNSIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQ 205

Query: 121 QMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKH 180
           QMDGLFQYL+TVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCKH
Sbjct: 206 QMDGLFQYLSTVFATDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGFVCSVCLSIFCKH 265

Query: 181 HKKCSTCGSVFGETPVELDS-LSKLKRKTPE 211
           HKKCSTCGSVFGETPV +DS +SKLKRKTPE
Sbjct: 266 HKKCSTCGSVFGETPVAVDSVVSKLKRKTPE 296

[Close]

BLAST of MELO3C008774 vs. TAIR 10
Match: AT1G18340.1 (basal transcription factor complex subunit-related )

HSP 1 Score: 323.2 bits (827), Expect = 1.6e-88
Identity = 158/211 (74.88%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MPALCTRLLKNLEEFVIGDEQSIKEDPKGGTM-SSLLSGSLSMALCYIQKVFRSGSLHPQ 60
           MPA+   LLK LEEFV  DE+  KE+     + S LLSGSLSMALCYIQ+VFRSG LHPQ
Sbjct: 89  MPAIFGSLLKKLEEFVTKDEELSKEEVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQ 148

Query: 61  PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVSIDSCYIGSHNSAFLQQASYITGGVYLKP 120
           PRILCLQGSPDGPEQYVA+MN+IFSAQR MV IDSCYIG  NSAFLQQASYITGGV+  P
Sbjct: 149 PRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPIDSCYIGVQNSAFLQQASYITGGVHHTP 208

Query: 121 QQMDGLFQYLATVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCK 180
           +Q+DGLFQYL T+F TDLHSR F+QLPK +GVDFRASCFCHKKTIDMGY+CSVCLSIFC+
Sbjct: 209 KQLDGLFQYLTTIFATDLHSRGFVQLPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCE 268

Query: 181 HHKKCSTCGSVFGETPV-ELDSLSKLKRKTP 210
           HHKKCSTCGSVFG++ + +  S S  KRK P
Sbjct: 269 HHKKCSTCGSVFGQSKLDDASSASDKKRKAP 299

The following BLAST results are available for this feature:

BLAST of MELO3C008774 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441918.2	9.9e-117	99.52	PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II transcription factor B subunit...	[more]
XP_004152842.1	3.8e-116	98.57	general transcription and DNA repair factor IIH subunit TFB4 [Cucumis sativus] >...	[more]
XP_038886688.1	2.3e-113	95.71	general transcription and DNA repair factor IIH subunit TFB4 [Benincasa hispida]...	[more]
KAG6578972.1	9.6e-112	94.29	LysM domain-containing GPI-anchored protein 1, partial [Cucurbita argyrosperma s...	[more]
XP_023550583.1	9.6e-112	94.29	RNA polymerase II transcription factor B subunit 4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C008774 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF41	2.2e-87	74.88	General transcription and DNA repair factor IIH subunit TFB4 OS=Arabidopsis thal...	[more]
Q86IB5	7.5e-43	52.50	General transcription factor IIH subunit 3 OS=Dictyostelium discoideum OX=44689 ...	[more]
Q13889	2.8e-37	43.14	General transcription factor IIH subunit 3 OS=Homo sapiens OX=9606 GN=GTF2H3 PE=...	[more]
Q8VD76	4.7e-37	45.70	General transcription factor IIH subunit 3 OS=Mus musculus OX=10090 GN=Gtf2h3 PE...	[more]
Q561R7	1.1e-36	45.16	General transcription factor IIH subunit 3 OS=Rattus norvegicus OX=10116 GN=Gtf2...	[more]

BLAST of MELO3C008774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4H7	4.8e-117	99.52	LOW QUALITY PROTEIN: RNA polymerase II transcription factor B subunit 4 OS=Cucum...	[more]
A0A0A0LMM2	1.8e-116	98.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072450 PE=3 SV=1	[more]
A0A6J1CM09	4.6e-112	94.29	RNA polymerase II transcription factor B subunit 4 isoform X1 OS=Momordica chara...	[more]
A0A6J1JZK7	6.7e-111	93.33	RNA polymerase II transcription factor B subunit 4 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1FJQ6	3.3e-110	93.36	RNA polymerase II transcription factor B subunit 4 OS=Cucurbita moschata OX=3662...	[more]

BLAST of MELO3C008774 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18340.1	1.6e-88	74.88	basal transcription factor complex subunit-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004600	TFIIH subunit Tfb4/GTF2H3	PFAM	PF03850	Tfb4	coord: 9..188 e-value: 1.8E-72 score: 244.1
IPR004600	TFIIH subunit Tfb4/GTF2H3	PANTHER	PTHR12831	TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED	coord: 3..194
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 2..135 e-value: 2.5E-40 score: 140.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008774.1	MELO3C008774.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0000439	transcription factor TFIIH core complex