MELO3C008773.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AAATAAAACCGTTCTCCACTCTTCACTTTCCTCTAGTTCTCTCCAATCTTCAACGTTCGGCTCCTCCCCTCCGATCAGAGGACGCCGGCGACCGCCGCTTATCCTCTCCCATCAGACGACACCGGCGACTGAAACTCCGATCTGACCAGCTGGGCTCTCCCTCCGTTTTGGTTACTTGCTGTCTCGGGTTAGGGGTTTTTCCCTTTTCTTTTCTTTTTTGTGTATCAATGTTTGAGGAATGTTTCAACTGTTCTGACCGAACATATATATTTCTTTATGCTTTTCTTCTATTCATTACTTCGTATTAATATATAGTCCCAACGGAAATGAGGAAATTTATATGAAACATTGCTTTTCGGGTGCATTTTAAAAAATTATGTATTTTTCTATTTATTTAATGTGGAATTTGTACATATATGGTGTGAGTTTTTGGAATATTATCTGGAATTTTTGGTATGGTTTTATCAGATTTGAGACATATGATGCTTTCTTTGGAATGTTTTTGTTTTGAGAACATTTTTTTAATGAATTCATTCTATTTTTTATACTAGATGCCATCTTCCTCCTCGTCTACATCTACCAATAGTAGTCAATCGTCCACGTTTTTACATTTGTTTTGGATGAAAATGTGGTCTCTATTTAGGATTTTGTATCTGTATTGTAGGTTGTAACTGTTTGATGGACTCAGACAACTAATGTACTCTTTATTTATGTTTTAAATAAATATTGCTATGTTCTTAGAAATTGAGCGTGTCGTTCCGTGTCATGTCGCATGTCCGTGCTTCCTAGATCTAGATTAGGGGGAATATCTAGAATGAGGTGCGACACATTGGGATATCTTTTTCGCAAGACCAATGGTTGGATAGTTCTAATTTGGGTTGTGTTCTCTACTCCCAAGTCTCCTTAGAAGTTAGAATTGTAACTAATCCTAATGGTTAAGTGCTGGAGCAATGAGGTGCAATTATTCTATCTTGGTTTGTCCCTTTTAGACAGTTTTTAAAGGATGAAGAAGCTTTGGATTTTCATATTTTATTGGGTTTTTTAGAAGGATGAAGAGTTCTTCACTTGGATTCAAGAAGTTGGAAGTTGGAGTCTTTGGGCTTGTTTTTTCAGTTAAATCTCTTACAAATATTTGTTGGCATGTACTCCAATTGATAAAGTTCTTTACATGGAAATCAAAATGGCCTCGTCATGTAAATATCACTATTTGGGTTATGATTTTTGGAGCTCTCAACTACTCTCTTACAATCCAAAGAAAACTTCCTTCTCACTATTTGTTACCTTCAATTTTCGCTCTATGCTTGGCAGATGATGAGAGGTCCCAACATCTCTTCTTTTGATTGTTGCTATTCAAAGGCATGTTGGTCGAAGTTGTTTTCAACGTTCAATCTTCCATTGGTTTTTATTGATTTGTTCAAGGACAGTGTGTTTTTGGCTTTTGGCTTTTGGCTTTGAGTGAGTCCTCCCTTAAAGTTGAAGCCTCTCTCTCAAATTTTATGGTCTAAAAAACCAGTTATAGCTATTCTCTCCAAAATTTGATTTGAAAGAAACCAATGCATTTTTCAAGACAAGTCTCTAGCGTGGTCCAACCATTTTGAGTTGCTCAAGTTAAGGCTTCATCTTGGTGTTCTCTCTTCCCGCCTTATGCAGATTATTCCATTCAAGTATATGGTTAAATTGGAATGCATTTATTTTACCAACATAATTTCCTTATATTGTTTGCATCTTCTCTCTAATCCGGAATCCGGATCACATGCTATGGAGCTGTACATTTGCAAGTTCTATGTGGAATTGATTCTTTCTGGAGTTTGGTTTTGTGCAGCTCGTTTGAAAGTTATTGGGGATCTGATCGGGAAGTTCCTCCTCCTATCAGTCTTTTAGTGGGAAATGTCGCTTTTTGGGGTTTGTGGGGGGGTGGGTTAGGATACCACCTAATAAGAATACTTGATAAACAAAAACAACACCAAGATGGATACGTAATGTATTGCAATTTCCGTAAAGAAAACACAAACAACATCAAGAGGGTTCTCTCTCCCAAGCTCCATGATAGAAACCCTTACCCCCTCCCTCTGGTGTCCAACTTGTCTTATTTTTGGCCAAGATGCCACTAACTAATGACCCATGATACTCCTTACTAATACACTACAAATCTCGCCCATATACCCCTCTAACTAGTACTCTCACAGCTTGCTCTGTTATGGGATCGTTGGGGGAGGGAAATAACTGAGCTTTTAAAGGTGTGGAGAGAGGTCCTAATGATGTGTGGTCTTTGGTGAGGTTTCATGTTTCTTTTTCTGCTCCAATTTCTCTGTAGTTGCTTTATAGACAATATTCGACTTATTTGCAACCCCACTCTGTAGTCTGTAGCGTGTGTATGCTTTTGTATATCTTCATTTTATTTTTTTAGTAAAAGCAGTTGTTTCTATTTAAAAAAATCATTGTGGAAATGACTTCAATTATAGGCTATCAAATTGTGGAAGTGTCATATTCTTTCATTTTATTTTAATGAAAGTTTTTTTTTTTATCCCAAAAAGGGCTATCGAATTGTTTGAGTTGTGTTTTTCTATGTTGTTTATCAATATATTGTTGTTTGAATTGTTGTCTTGTGATATTTGATGCTTTGCAAACTATGTTATTTTTCTATGATTCTATGTTTCTCTTGTAAATTAATTAGTCAAACATGCCTATGCTAAGCATAACATTGTTGCGTATAAACACATGAGTCTAGTGGTCTTAGGCATTAGTTTATATTAATGGTATTTATAGAGAGCAATTCCCCTTTAAATATTATTCATTTTTGATAAACTTGTTTCAATCCAGTACTATCATTTTGAAATGCAAATGGCAACTTTTATAAGGGCTCTAAGCAAAGCTCATCAAGTTCTATACTTGAAAGCCTCCCCCACCATTTTGAGAAGCAAATTGATGCCCTTTTTGCCTAGTGTTTTTATTGGGTTGGAGAATCTACAAAGCCAACTAACAAATCGAAATCAGAATCACCATGGTTGTTCCTTTAGTCTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCGAATGAGGATAGCAAGAGGCAATTATTCAATAGGTTCGTTCTTGCTTCATTTTGTTAATTAATTTTCTCATCCCTTTCGCTCTGTGTTTCTCAATTATTGACGCATTTGTTTTGATTCACAAGTTGTTTTGTTTGGTTGTTGGACTTAACAGATTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGGGATCTAATTAATGTTCTTGACCTGGTAATTTAGTCTTGTACTGCTGACGACTTCTGCGCATTACTATTTTTTTTCCCCATTTTTGTTATCTTTTTCTTCCTTTTTTATCTTTGTTTTTTCTCCCTATTGTTATATAAATACGGGTGTATTTCACAATGTCCAAATATGCACGAATATATAATATTTATTTATTTAAAAAAATGTGTCTCCAACATTTTGTGTCGTTTTGAAAATTGACATGTTGTCATTGTGTCGTATTCAATGTCTATTTCTTAGCTTGCAACTATCCCATAAAAATGAAAAATAGTAGAGATGCAACAAAGACTCGATAATTCTTCTACTCTTGCAGGAAAATCCAGATTTATGGAAGTGGTTAACTGGCCAAGAGCAGCCCCCTGAAGCTTTGAAAACAAATCCTGTGAGCATCCAAGCATGGCATTAATTACTGACCCTTTTATCTTGATTAAATATGTGGTTTACAATTAGAGTATTGTATCGTTGTAGGTATTTACTGGAGTGAAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAGCTCTTCCCTTTAACTTTATGCCTAATCTCTCTTTTAAGCATATAAGAACAGAAAAGCCCTGCTAAGGTTTCTATACAAATGGTGGATTGTGAATAAGTTAACCCAACAAGTACTTCGAAGGGAACATTGTTTAGTGGTCTTTTCCTTTAAACCCTTGATCTATCGTATATTAATAATTTTTTTCCTTGTTACGGTAACTACGTTGTACCGATCTCGAATAATTTGTTGTTTTGATGTGCTTACCAGTATAGATTGTATTTCTTTATAATTTGTGTCTGATTTCTTTAGGGTGTTTGAAGCAACGTGTGTAGTTATTGCACTTGAAATTTAGTTTCGGAAGTTATTAGATGTGAGTTTGGGATGTGAAGTTGT AAATAAAACCGTTCTCCACTCTTCACTTTCCTCTAGTTCTCTCCAATCTTCAACGTTCGGCTCCTCCCCTCCGATCAGAGGACGCCGGCGACCGCCGCTTATCCTCTCCCATCAGACGACACCGGCGACTGAAACTCCGATCTGACCAGCTGGGCTCTCCCTCCGTTTTGGTTACTTGCTGTCTCGGTACTATCATTTTGAAATGCAAATGGCAACTTTTATAAGGGCTCTAAGCAAAGCTCATCAAGTTCTATACTTGAAAGCCTCCCCCACCATTTTGAGAAGCAAATTGATGCCCTTTTTGCCTAGTGTTTTTATTGGGTTGGAGAATCTACAAAGCCAACTAACAAATCGAAATCAGAATCACCATGGTTGTTCCTTTAGTCTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCGAATGAGGATAGCAAGAGGCAATTATTCAATAGATTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGGGATCTAATTAATGTTCTTGACCTGGAAAATCCAGATTTATGGAAGTGGTTAACTGGCCAAGAGCAGCCCCCTGAAGCTTTGAAAACAAATCCTGTATTTACTGGAGTGAAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAGCTCTTCCCTTTAACTTTATGCCTAATCTCTCTTTTAAGCATATAAGAACAGAAAAGCCCTGCTAAGGTTTCTATACAAATGGTGGATTGTGAATAAGTTAACCCAACAAGTACTTCGAAGGGAACATTGTTTAGTGGTCTTTTCCTTTAAACCCTTGATCTATCGTATATTAATAATTTTTTTCCTTGTTACGGTAACTACGTTGTACCGATCTCGAATAATTTGTTGTTTTGATGTGCTTACCAGTATAGATTGTATTTCTTTATAATTTGTGTCTGATTTCTTTAGGGTGTTTGAAGCAACGTGTGTAGTTATTGCACTTGAAATTTAGTTTCGGAAGTTATTAGATGTGAGTTTGGGATGTGAAGTTGT ATGCAAATGGCAACTTTTATAAGGGCTCTAAGCAAAGCTCATCAAGTTCTATACTTGAAAGCCTCCCCCACCATTTTGAGAAGCAAATTGATGCCCTTTTTGCCTAGTGTTTTTATTGGGTTGGAGAATCTACAAAGCCAACTAACAAATCGAAATCAGAATCACCATGGTTGTTCCTTTAGTCTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCGAATGAGGATAGCAAGAGGCAATTATTCAATAGATTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGGGATCTAATTAATGTTCTTGACCTGGAAAATCCAGATTTATGGAAGTGGTTAACTGGCCAAGAGCAGCCCCCTGAAGCTTTGAAAACAAATCCTGTATTTACTGGAGTGAAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAG MQMATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFSLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQWVRGWDDFKKGRDGPITGNQ Homology
BLAST of MELO3C008773.jh1 vs. NCBI nr
Match: XP_008441917.1 (PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Cucumis melo] >KAA0047670.1 succinate dehydrogenase assembly factor 2 [Cucumis melo var. makuwa] >TYK08325.1 succinate dehydrogenase assembly factor 2 [Cucumis melo var. makuwa]) HSP 1 Score: 413 bits (1061), Expect = 1.20e-145 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. NCBI nr
Match: XP_004152841.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Cucumis sativus] >XP_011648982.1 succinate dehydrogenase assembly factor 2, mitochondrial [Cucumis sativus] >KAE8651700.1 hypothetical protein Csa_006248 [Cucumis sativus]) HSP 1 Score: 383 bits (984), Expect = 6.16e-134 Identity = 184/198 (92.93%), Postives = 191/198 (96.46%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. NCBI nr
Match: XP_038892622.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Benincasa hispida]) HSP 1 Score: 364 bits (934), Expect = 2.59e-126 Identity = 176/198 (88.89%), Postives = 185/198 (93.43%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. NCBI nr
Match: KAG7032455.1 (Succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 337 bits (864), Expect = 1.34e-115 Identity = 164/201 (81.59%), Postives = 177/201 (88.06%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. NCBI nr
Match: XP_022994486.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita maxima]) HSP 1 Score: 335 bits (860), Expect = 5.46e-115 Identity = 164/201 (81.59%), Postives = 176/201 (87.56%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy Swiss-Prot
Match: Q9FI44 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDHAF2 PE=1 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.1e-55 Identity = 105/193 (54.40%), Postives = 141/193 (73.06%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy Swiss-Prot
Match: Q54B20 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=DDB_G0293946 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.5e-08 Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy Swiss-Prot
Match: B6JZ70 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=SJAG_01895 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06 Identity = 25/83 (30.12%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy Swiss-Prot
Match: P0CR33 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CNBA4490 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06 Identity = 31/100 (31.00%), Postives = 52/100 (52.00%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy Swiss-Prot
Match: P0CR32 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=CNA04680 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06 Identity = 31/100 (31.00%), Postives = 52/100 (52.00%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C9Y9 (Succinate dehydrogenase assembly factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001200 PE=4 SV=1) HSP 1 Score: 413 bits (1061), Expect = 5.81e-146 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B413 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485912 PE=4 SV=1) HSP 1 Score: 413 bits (1061), Expect = 5.81e-146 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LKF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072460 PE=4 SV=1) HSP 1 Score: 385 bits (989), Expect = 5.59e-134 Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JZA0 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111490192 PE=4 SV=1) HSP 1 Score: 335 bits (860), Expect = 2.64e-115 Identity = 164/201 (81.59%), Postives = 176/201 (87.56%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EQG7 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111436468 PE=4 SV=1) HSP 1 Score: 335 bits (859), Expect = 3.75e-115 Identity = 163/201 (81.09%), Postives = 177/201 (88.06%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. TAIR 10
Match: AT5G51040.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631); Has 532 Blast hits to 532 proteins in 207 species: Archae - 0; Bacteria - 285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). ) HSP 1 Score: 216.9 bits (551), Expect = 1.5e-56 Identity = 105/193 (54.40%), Postives = 141/193 (73.06%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. TAIR 10
Match: AT5G51040.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). ) HSP 1 Score: 209.1 bits (531), Expect = 3.2e-54 Identity = 105/202 (51.98%), Postives = 141/202 (69.80%), Query Frame = 0
BLAST of MELO3C008773.jh1 vs. TAIR 10
Match: AT5G51040.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631); Has 368 Blast hits to 368 proteins in 141 species: Archae - 0; Bacteria - 216; Metazoa - 8; Fungi - 13; Plants - 40; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). ) HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52 Identity = 101/193 (52.33%), Postives = 137/193 (70.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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