MELO3C008729 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008729
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein MNN4-like
Location	chr05: 18366614 .. 18367036 (-)
RNA-Seq Expression	MELO3C008729
Synteny	MELO3C008729

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTAAGAAAGAAAGGATTGAGGAAGAAGAGTGTGAAGGTTGCAAGAAACACGACGAGGAAGATATGTAAAAGAGGGAGAAGTCAAAGAAACAAGGTGAAAAACAAAGAAGGATCCTCCACTTTTATCGTCGAAACGGACTTTGAGAGGGTCACGAGGAAGGCTCAAGAGAAAAAGGAGAAGGTGGTGTTAGACCTCATTCGCATCAAAATCAAAGCACATGGCGACAAAGCCCTCACAAAAACGAAAAAGGAGGTAAAATTGAGTCGGCGAGGAAAGCTCCTCAATAAAATTGAGAAAATCCCTCTCTCTACGGAGAAGGGCAATGTGAAGAAAACTCAAATCAAAGAGTTGGTTGAGAATTTTGACAGGGAGATGAATGAATTAAGCCCTCTAGATGACGCAATGGTGTTGCCTTAA

mRNA sequence

ATGAAATTAAGAAAGAAAGGATTGAGGAAGAAGAGTGTGAAGGTTGCAAGAAACACGACGAGGAAGATATGTAAAAGAGGGAGAAGTCAAAGAAACAAGGTGAAAAACAAAGAAGGATCCTCCACTTTTATCGTCGAAACGGACTTTGAGAGGGTCACGAGGAAGGCTCAAGAGAAAAAGGAGAAGGTGGTGTTAGACCTCATTCGCATCAAAATCAAAGCACATGGCGACAAAGCCCTCACAAAAACGAAAAAGGAGGTAAAATTGAGTCGGCGAGGAAAGCTCCTCAATAAAATTGAGAAAATCCCTCTCTCTACGGAGAAGGGCAATGTGAAGAAAACTCAAATCAAAGAGTTGGTTGAGAATTTTGACAGGGAGATGAATGAATTAAGCCCTCTAGATGACGCAATGGTGTTGCCTTAA

Coding sequence (CDS)

ATGAAATTAAGAAAGAAAGGATTGAGGAAGAAGAGTGTGAAGGTTGCAAGAAACACGACGAGGAAGATATGTAAAAGAGGGAGAAGTCAAAGAAACAAGGTGAAAAACAAAGAAGGATCCTCCACTTTTATCGTCGAAACGGACTTTGAGAGGGTCACGAGGAAGGCTCAAGAGAAAAAGGAGAAGGTGGTGTTAGACCTCATTCGCATCAAAATCAAAGCACATGGCGACAAAGCCCTCACAAAAACGAAAAAGGAGGTAAAATTGAGTCGGCGAGGAAAGCTCCTCAATAAAATTGAGAAAATCCCTCTCTCTACGGAGAAGGGCAATGTGAAGAAAACTCAAATCAAAGAGTTGGTTGAGAATTTTGACAGGGAGATGAATGAATTAAGCCCTCTAGATGACGCAATGGTGTTGCCTTAA

Protein sequence

MKLRKKGLRKKSVKVARNTTRKICKRGRSQRNKVKNKEGSSTFIVETDFERVTRKAQEKKEKVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIPLSTEKGNVKKTQIKELVENFDREMNELSPLDDAMVLP

Homology

[Close]

BLAST of MELO3C008729 vs. NCBI nr
Match: TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16
Identity = 64/134 (47.76%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 2   KLRKKGLRKKSVKVARNTTRKICKRGRSQRNKVKNKEGSSTFIVETDFERVTRKAQEKKE 61
           K ++K  RKK  +  R    ++ K+G+      K K  SS  I  T+FERV RKAQ+KKE
Sbjct: 53  KEKEKERRKKRNEEERRRKEELKKQGK------KEKVQSSPSIAPTEFERVARKAQKKKE 112

Query: 62  KVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIPLSTEKGNVKKTQIKELVE 121
           KVV  L+++K+   G KALT+ KKEVKL  + +LLNKI+K+PL  +K  VK T  +ELVE
Sbjct: 113 KVVSGLLKMKVIVQGAKALTQEKKEVKLREQEELLNKIDKVPLFAKKRKVKNTLSEELVE 172

Query: 122 NFDREMNELSPLDD 136
            F RE++ LSPL++
Sbjct: 173 EFKRELDNLSPLEE 180

[Close]

BLAST of MELO3C008729 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.0e-13
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 44  IVETDFERVTRKAQEKKEKVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIP 103
           +V+T+FERV  KAQEK EKV   L++IK+KA    AL + KKE+KL +  +LLNK++K+ 
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 104 LSTEKGNVKKTQIKELVENFDREMNELSPLDDAMV 139
           LS EKG  K+   +E  + F++E++E SPL+D +V
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVV 95

[Close]

BLAST of MELO3C008729 vs. NCBI nr
Match: TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 56/138 (40.58%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 2   KLRKKGLRKKSVKVARNTTRKICKRGRSQRNKVKNKE----GSSTFIVETDFERVTRKAQ 61
           KLRK+   KK  K      +KI ++   +  + + +E     +S  I +  F+RV+RKAQ
Sbjct: 80  KLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEEQEEEVCEISASMPIAKIKFDRVSRKAQ 139

Query: 62  EKKEKVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIPLSTEKGNVKKTQIK 121
           ++KEKV   L++IK+KA G KAL + KKE+KL  + +LLNK+ K+ LS E    K+   +
Sbjct: 140 KEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLALSVENSKEKEKTFE 199

Query: 122 ELVENFDREMNELSPLDD 136
           E  E F++E++ELSPL D
Sbjct: 200 EYCEEFEKEISELSPLKD 217

[Close]

BLAST of MELO3C008729 vs. NCBI nr
Match: KAA0060680.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 35  KNKEGSSTFIVETDFERVTRKAQEKKEKVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGK 94
           ++ EG ST IVET+FERV +K +EKKEKV  DL++IK+KA G KAL + KKE KL  + K
Sbjct: 7   RDHEGFSTSIVETEFERVAKKTKEKKEKVAYDLLKIKLKARGFKALAQEKKETKLKEQHK 66

Query: 95  LLNKIEKIPLSTEKGNVKKTQIKELVENFDREMNE 130
           LLNK+ K+     K    KT  +E+ E  ++E+ +
Sbjct: 67  LLNKMNKVSFFVVKDKAMKTSNEEICEELEKELGK 101

[Close]

BLAST of MELO3C008729 vs. NCBI nr
Match: KAA0060687.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 8.3e-11
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 2   KLRKKGLRKKSVKVARNTTRKICKRGRSQRNKVKNKEGSSTFIVETDFERVTRKAQEKKE 61
           K +KK   +K+ K      RK  K     + +   KEG+S+ IVET FER+ +K Q+K E
Sbjct: 12  KEKKKRKDEKNKKEKDEARRKEKKVPEEAQKETMQKEGTSSAIVETKFERLIKKTQQKTE 71

Query: 62  KVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIPLSTEKGNVKKTQIKE 119
           KV   L++I +KAHG KAL + KKE KL +R +LL+K+EK+ LST KG  K+    E
Sbjct: 72  KVKSGLLKINVKAHGVKALVQEKKETKLRKREELLSKVEKVTLSTNKGKGKEKTFDE 128

[Close]

BLAST of MELO3C008729 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 8.4e-17
Identity = 64/134 (47.76%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 2   KLRKKGLRKKSVKVARNTTRKICKRGRSQRNKVKNKEGSSTFIVETDFERVTRKAQEKKE 61
           K ++K  RKK  +  R    ++ K+G+      K K  SS  I  T+FERV RKAQ+KKE
Sbjct: 53  KEKEKERRKKRNEEERRRKEELKKQGK------KEKVQSSPSIAPTEFERVARKAQKKKE 112

Query: 62  KVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIPLSTEKGNVKKTQIKELVE 121
           KVV  L+++K+   G KALT+ KKEVKL  + +LLNKI+K+PL  +K  VK T  +ELVE
Sbjct: 113 KVVSGLLKMKVIVQGAKALTQEKKEVKLREQEELLNKIDKVPLFAKKRKVKNTLSEELVE 172

Query: 122 NFDREMNELSPLDD 136
            F RE++ LSPL++
Sbjct: 173 EFKRELDNLSPLEE 180

[Close]

BLAST of MELO3C008729 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-13
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 44  IVETDFERVTRKAQEKKEKVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIP 103
           +V+T+FERV  KAQEK EKV   L++IK+KA    AL + KKE+KL +  +LLNK++K+ 
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 104 LSTEKGNVKKTQIKELVENFDREMNELSPLDDAMV 139
           LS EKG  K+   +E  + F++E++E SPL+D +V
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVV 95

[Close]

BLAST of MELO3C008729 vs. ExPASy TrEMBL
Match: A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13
Identity = 56/138 (40.58%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 2   KLRKKGLRKKSVKVARNTTRKICKRGRSQRNKVKNKE----GSSTFIVETDFERVTRKAQ 61
           KLRK+   KK  K      +KI ++   +  + + +E     +S  I +  F+RV+RKAQ
Sbjct: 80  KLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEEQEEEVCEISASMPIAKIKFDRVSRKAQ 139

Query: 62  EKKEKVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIPLSTEKGNVKKTQIK 121
           ++KEKV   L++IK+KA G KAL + KKE+KL  + +LLNK+ K+ LS E    K+   +
Sbjct: 140 KEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLALSVENSKEKEKTFE 199

Query: 122 ELVENFDREMNELSPLDD 136
           E  E F++E++ELSPL D
Sbjct: 200 EYCEEFEKEISELSPLKD 217

[Close]

BLAST of MELO3C008729 vs. ExPASy TrEMBL
Match: A0A5A7UZY5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005780 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 35  KNKEGSSTFIVETDFERVTRKAQEKKEKVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGK 94
           ++ EG ST IVET+FERV +K +EKKEKV  DL++IK+KA G KAL + KKE KL  + K
Sbjct: 7   RDHEGFSTSIVETEFERVAKKTKEKKEKVAYDLLKIKLKARGFKALAQEKKETKLKEQHK 66

Query: 95  LLNKIEKIPLSTEKGNVKKTQIKELVENFDREMNE 130
           LLNK+ K+     K    KT  +E+ E  ++E+ +
Sbjct: 67  LLNKMNKVSFFVVKDKAMKTSNEEICEELEKELGK 101

[Close]

BLAST of MELO3C008729 vs. ExPASy TrEMBL
Match: A0A5A7V1I3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005890 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.0e-11
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 2   KLRKKGLRKKSVKVARNTTRKICKRGRSQRNKVKNKEGSSTFIVETDFERVTRKAQEKKE 61
           K +KK   +K+ K      RK  K     + +   KEG+S+ IVET FER+ +K Q+K E
Sbjct: 12  KEKKKRKDEKNKKEKDEARRKEKKVPEEAQKETMQKEGTSSAIVETKFERLIKKTQQKTE 71

Query: 62  KVVLDLIRIKIKAHGDKALTKTKKEVKLSRRGKLLNKIEKIPLSTEKGNVKKTQIKE 119
           KV   L++I +KAHG KAL + KKE KL +R +LL+K+EK+ LST KG  K+    E
Sbjct: 72  KVKSGLLKINVKAHGVKALVQEKKETKLRKREELLSKVEKVTLSTNKGKGKEKTFDE 128

The following BLAST results are available for this feature:

BLAST of MELO3C008729 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00332.1	1.7e-16	47.76	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0041276.1	4.0e-13	48.42	protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu...	[more]
TYJ97774.1	1.2e-12	40.58	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0060680.1	1.2e-12	48.42	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0060687.1	8.3e-11	44.44	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C008729 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C008729 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNL6	8.4e-17	47.76	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0...	[more]
A0A5A7TGV4	1.9e-13	48.42	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009...	[more]
A0A5D3BFC8	5.6e-13	40.58	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A5A7UZY5	5.6e-13	48.42	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005...	[more]
A0A5A7V1I3	4.0e-11	44.44	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005...	[more]

BLAST of MELO3C008729 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008729.1	MELO3C008729.1	mRNA