MELO3C008663 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008663
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	photosystem I reaction center subunit IV, chloroplastic-like
Location	chr05: 16482290 .. 16483422 (-)
RNA-Seq Expression	MELO3C008663
Synteny	MELO3C008663

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTTATCATTTTTTCATTTGGGTTTATCTCTTCATCTTCCAAAGCATTAACATATTGTTGATTCATCAGTTAAAGAGCATAGAGCAAAACGGAAATTGAAAGACCAAAGGGCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGTGTGTGACAACACTTTTTTTTTTCCTTTTTATTATTAGTTCATGGAGATTGCCGTAGAATTCTATTGATGCTTGATTACTTGAACAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGTTAGACCCTTTAATTTTTATTTATTCAAGATTTTTGTTTCATATTCATTCCTTTTAGAACGATAAATCAAGTGGCTAACTATGTCCTGTTTAAGGGTTAATTAGGTTGCTGTATTTAATTAGGGATTGAGATTGTGCATATTTGATGTTACAACTAATATAATGTAGATATGTACTAATGGTTAATATATGTACGAATCAAACTTTGCAGGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAAGCTTTTTTAGTTTGCTTGTGTATTTTTGAGTTAAAAATGTTTGTATAATACTCCAATTTCAATCTATTTCTTCCCTCTCTCCATGACTGTGTGTTTACTGATTCTAAACACAATTTCTCTTCCCTTTTGCTTATATGGTTCACAGCAATCAGAATTTTCCAGTGCTTCTAATTTTAGGAGATTAAAATGGTTTTACTTTCACAAGATTCTGCTTCTACAGTGTACAAGCAAGGGAAACCAATTGTGGAAGTTTGAATTGATCTCTTTTTTTCTTTTT

mRNA sequence

TGGTTATCATTTTTTCATTTGGGTTTATCTCTTCATCTTCCAAAGCATTAACATATTGTTGATTCATCAGTTAAAGAGCATAGAGCAAAACGGAAATTGAAAGACCAAAGGGCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGTTAGACCCTTTAATTTTTATTTATTCAAGATTTTTGTTTCATATTCATTCCTTTTAGAACGATAAATCAAGTGGCTAACTATGTCCTGTTTAAGGGTTAATTAGGTTGCTGTATTTAATTAGGGATTGAGATTGTGCATATTTGATGTTACAACTAATATAATGTAGATATGTACTAATGGTTAATATATGTACGAATCAAACTTTGCAGGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAAGCTTTTTTAGTTTGCTTGTGTATTTTTGAGTTAAAAATGTTTGTATAATACTCCAATTTCAATCTATTTCTTCCCTCTCTCCATGACTGTGTGTTTACTGATTCTAAACACAATTTCTCTTCCCTTTTGCTTATATGGTTCACAGCAATCAGAATTTTCCAGTGCTTCTAATTTTAGGAGATTAAAATGGTTTTACTTTCACAAGATTCTGCTTCTACAGTGTACAAGCAAGGGAAACCAATTGTGGAAGTTTGAATTGATCTCTTTTTTTCTTTTT

Coding sequence (CDS)

ATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGTTAGACCCTTTAATTTTTATTTATTCAAGATTTTTGTTTCATATTCATTCCTTTTAGAACGATAA

Protein sequence

MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQVRPFNFYLFKIFVSYSFLLER

Homology

[Close]

BLAST of MELO3C008663 vs. NCBI nr
Match: XP_008441802.1 (PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo])

HSP 1 Score: 194.9 bits (494), Expect = 4.4e-46
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA
Sbjct: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 112

[Close]

BLAST of MELO3C008663 vs. NCBI nr
Match: XP_038889433.1 (photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 191.8 bits (486), Expect = 3.7e-45
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP
Sbjct: 1   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 61  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 110

[Close]

BLAST of MELO3C008663 vs. NCBI nr
Match: XP_004152807.2 (photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-41
Identity = 106/112 (94.64%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAA
Sbjct: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAA 60

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           PPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 61  PPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 110

[Close]

BLAST of MELO3C008663 vs. NCBI nr
Match: KAE8651724.1 (hypothetical protein Csa_006032 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-41
Identity = 106/112 (94.64%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAA
Sbjct: 89  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAA 148

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           PPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 149 PPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 198

[Close]

BLAST of MELO3C008663 vs. NCBI nr
Match: KAA0061399.1 (photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa])

HSP 1 Score: 172.2 bits (435), Expect = 3.1e-39
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 15  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 74
           VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 75  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 107

[Close]

BLAST of MELO3C008663 vs. ExPASy Swiss-Prot
Match: Q41229 (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEB PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRAAASDEAAP 62
           MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RAA  +EAAP
Sbjct: 1   MASSSMASAASGFMVATPNIATSNTAPRTSMLFFSSSKNNTTTNFPRLVVRAA--EEAAP 60

Query: 63  PPPAAAPAAATAEEP---KPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           P   AA A A  E P     KP PIGPKRG KV++LRKESYWYK VGSVV VDQ
Sbjct: 61  P---AATATAEGEAPPAKAAKPPPIGPKRGTKVRVLRKESYWYKGVGSVVAVDQ 109

[Close]

BLAST of MELO3C008663 vs. ExPASy Swiss-Prot
Match: Q9S831 (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAE1 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.1e-13
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 16  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAP 75
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 76  AAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
             ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV VDQ
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQ 108

[Close]

BLAST of MELO3C008663 vs. ExPASy Swiss-Prot
Match: Q41228 (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEA PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-12
Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RAA  +EAAPP
Sbjct: 1   MASCNMASAASNFLVATPNVASNTNTSRTTMLFF-SSKNYGSTAPRLVVRAA--EEAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
             AA    A A     KP PIGPKRG KV+ILRKESYWYK  GSVV  DQ
Sbjct: 61  AAAATAEPAEAPVKAAKPPPIGPKRGTKVRILRKESYWYKGTGSVVACDQ 107

[Close]

BLAST of MELO3C008663 vs. ExPASy Swiss-Prot
Match: P12354 (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAE-1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.7e-12
Identity = 50/89 (56.18%), Postives = 60/89 (67.42%), Query Frame = 0


Query: 24  SSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPI 83
           SS + RL      P  + S  RS+RLV+RAA  +EAA  P AA+P    A +   KP PI
Sbjct: 6   SSVAVRLGLTQVLPNKNFSSPRSTRLVVRAA--EEAAAAPAAASP-EGEAPKAAAKPPPI 65

Query: 84  GPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           GPKRG+KV+I+RKESYWYK VGSVV VDQ
Sbjct: 66  GPKRGSKVRIMRKESYWYKGVGSVVAVDQ 91

[Close]

BLAST of MELO3C008663 vs. ExPASy Swiss-Prot
Match: Q9S714 (Photosystem I reaction center subunit IV B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAE2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 8   LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASD 67
           ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS 
Sbjct: 3   MTSAATGFILTANVPAAIGGGSSKSTTIVSFLPMR----SFGSRLVVRAAEDTPPATASS 62

Query: 68  EAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           +++    AAAPA   A   K KP PIGPKRG+KVKILRKESYWYK+VGSVV VDQ
Sbjct: 63  DSSSTTAAAAPAKVPA--AKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQ 111

[Close]

BLAST of MELO3C008663 vs. ExPASy TrEMBL
Match: A0A1S3B3T3 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103485855 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA
Sbjct: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 112

[Close]

BLAST of MELO3C008663 vs. ExPASy TrEMBL
Match: A0A0A0LJQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.1e-42
Identity = 106/112 (94.64%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAA
Sbjct: 77  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAA 136

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           PPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 137 PPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 186

[Close]

BLAST of MELO3C008663 vs. ExPASy TrEMBL
Match: A0A5A7V6V9 (Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00230 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 15  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 74
           VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 75  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 107

[Close]

BLAST of MELO3C008663 vs. ExPASy TrEMBL
Match: A0A6J1FC09 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444038 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.5e-34
Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MAASNLSCIASGV+IPSSTTI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSTTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           P AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYKDVGSVVTVDQ
Sbjct: 61  PAAAATADAPAEAPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQ 109

[Close]

BLAST of MELO3C008663 vs. ExPASy TrEMBL
Match: A0A6J1HLT8 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465716 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33
Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MAASNLSCIASGV+IPSS TI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSPTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           P AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYKDVGSVVTVDQ
Sbjct: 61  PAAAATADAPAEVPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQ 109

[Close]

BLAST of MELO3C008663 vs. TAIR 10
Match: AT4G28750.1 (Photosystem I reaction centre subunit IV / PsaE protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 16  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAP 75
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 76  AAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
             ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV VDQ
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQ 108

[Close]

BLAST of MELO3C008663 vs. TAIR 10
Match: AT2G20260.1 (photosystem I subunit E-2 )

HSP 1 Score: 64.3 bits (155), Expect = 8.4e-11
Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 8   LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASD 67
           ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS 
Sbjct: 3   MTSAATGFILTANVPAAIGGGSSKSTTIVSFLPMR----SFGSRLVVRAAEDTPPATASS 62

Query: 68  EAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ 113
           +++    AAAPA   A   K KP PIGPKRG+KVKILRKESYWYK+VGSVV VDQ
Sbjct: 63  DSSSTTAAAAPAKVPA--AKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQ 111

The following BLAST results are available for this feature:

BLAST of MELO3C008663 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441802.1	4.4e-46	100.00	PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis...	[more]
XP_038889433.1	3.7e-45	100.00	photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]	[more]
XP_004152807.2	1.5e-41	94.64	photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]	[more]
KAE8651724.1	1.5e-41	94.64	hypothetical protein Csa_006032 [Cucumis sativus]	[more]
KAA0061399.1	3.1e-39	100.00	photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 ...	[more]

BLAST of MELO3C008663 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41229	1.0e-13	49.12	Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestri...	[more]
Q9S831	5.1e-13	52.88	Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thalian...	[more]
Q41228	3.3e-12	47.27	Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestri...	[more]
P12354	5.7e-12	56.18	Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=...	[more]
Q9S714	1.2e-09	46.09	Photosystem I reaction center subunit IV B, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of MELO3C008663 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3T3	2.1e-46	100.00	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A0A0LJQ1	7.1e-42	94.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1	[more]
A0A5A7V6V9	1.5e-39	100.00	Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1FC09	2.5e-34	84.55	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1HLT8	1.6e-33	83.64	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima...	[more]

BLAST of MELO3C008663 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28750.1	3.6e-14	52.88	Photosystem I reaction centre subunit IV / PsaE protein	[more]
AT2G20260.1	8.4e-11	46.09	photosystem I subunit E-2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PFAM	PF02427	PSI_PsaE	coord: 86..113 e-value: 2.8E-13 score: 49.4
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PANTHER	PTHR34549	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED	coord: 3..112
None	No IPR available	GENE3D	2.30.30.50		coord: 79..128 e-value: 1.7E-16 score: 61.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..87
None	No IPR available	PANTHER	PTHR34549:SF7	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A	coord: 3..112
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 86..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008663.1	MELO3C008663.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009538	photosystem I reaction center