MELO3C008633 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008633
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein MNN4-like
Location	chr05: 15828242 .. 15828454 (-)
RNA-Seq Expression	MELO3C008633
Synteny	MELO3C008633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGAGAGAAAAAGAGAGGAAGGAGAAAGAAGAGGAAGAGAAAGCGAGAAGAGAAAGAAATAGAAGAAGAAAAGGAAGAAAGGAAAAGGCAAAAGAAAAGAGAGAAACAAGGCAAGAAAGATCAAGAAACAATTTCCTTGCTTATTTCCCCAAAAGAATTCAAGAAGTTTGCGAAGAAAGCTGAAGAGAAGCACGAGAAAGTTAAATAA

mRNA sequence

ATGCAAAGAGAGAAAAAGAGAGGAAGGAGAAAGAAGAGGAAGAGAAAGCGAGAAGAGAAAGAAATAGAAGAAGAAAAGGAAGAAAGGAAAAGGCAAAAGAAAAGAGAGAAACAAGGCAAGAAAGATCAAGAAACAATTTCCTTGCTTATTTCCCCAAAAGAATTCAAGAAGTTTGCGAAGAAAGCTGAAGAGAAGCACGAGAAAGTTAAATAA

Coding sequence (CDS)

ATGCAAAGAGAGAAAAAGAGAGGAAGGAGAAAGAAGAGGAAGAGAAAGCGAGAAGAGAAAGAAATAGAAGAAGAAAAGGAAGAAAGGAAAAGGCAAAAGAAAAGAGAGAAACAAGGCAAGAAAGATCAAGAAACAATTTCCTTGCTTATTTCCCCAAAAGAATTCAAGAAGTTTGCGAAGAAAGCTGAAGAGAAGCACGAGAAAGTTAAATAA

Protein sequence

MQREKKRGRRKKRKRKREEKEIEEEKEERKRQKKREKQGKKDQETISLLISPKEFKKFAKKAEEKHEKVK

Homology

[Close]

BLAST of MELO3C008633 vs. NCBI nr
Match: TYJ98692.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 4.6e-18
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MQREKKRGRRKKRKRKREEKEIEEEKEERKRQKKREKQGKKDQETISLLISPKEFKKFAK 60
          MQREKKRGRRKKRKRKREEKEIEEEKEERKRQKKREKQGKKDQETISLLISPKEFKKFAK
Sbjct: 1  MQREKKRGRRKKRKRKREEKEIEEEKEERKRQKKREKQGKKDQETISLLISPKEFKKFAK 60

Query: 61 KAEEKHEK 69
          KAEEKHEK
Sbjct: 61 KAEEKHEK 68

[Close]

BLAST of MELO3C008633 vs. ExPASy TrEMBL
Match: A0A5D3BG03 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00250 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MQREKKRGRRKKRKRKREEKEIEEEKEERKRQKKREKQGKKDQETISLLISPKEFKKFAK 60
          MQREKKRGRRKKRKRKREEKEIEEEKEERKRQKKREKQGKKDQETISLLISPKEFKKFAK
Sbjct: 1  MQREKKRGRRKKRKRKREEKEIEEEKEERKRQKKREKQGKKDQETISLLISPKEFKKFAK 60

Query: 61 KAEEKHEK 69
          KAEEKHEK
Sbjct: 61 KAEEKHEK 68

The following BLAST results are available for this feature:

BLAST of MELO3C008633 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98692.1	4.6e-18	100.00	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C008633 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C008633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BG03	2.2e-18	100.00	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00...	[more]

BLAST of MELO3C008633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008633.1	MELO3C008633.1	mRNA