MELO3C008522 (gene) Melon (DHL92) v4

Overview
NameMELO3C008522
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionFlocculation protein FLO11-like
Locationchr05: 11819438 .. 11819770 (-)
RNA-Seq ExpressionMELO3C008522
SyntenyMELO3C008522
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCTGCTCCTCAGACTATCTCTCTCAACTATAAACTGTTCCAGGGCTCCCATGTGTCTAACCTTCCTACTACATTTCATCTTCCCCATTGGGGCTCTAGCTCATCGGGTGTAGATTTGCAAGTCCCAATCACTGGCTTGCATTTATCTCATGACTTGGTAGTACGAGTTGTGCATCTTCTGACTGACGAATCTCAAGCTCTCAATGTCACCCTAGAGGAAATTCATCAGGTTCAGGCTACACTTACTAGTCGTCACACAGTTGTGGACGCAGTGCTTAATGCTCTTAAAGCCAGGATCGCTGAATCTCAGGAGTCCTTGGATCCATAA

mRNA sequence

ATGGGTCCTGCTCCTCAGACTATCTCTCTCAACTATAAACTGTTCCAGGGCTCCCATGTGTCTAACCTTCCTACTACATTTCATCTTCCCCATTGGGGCTCTAGCTCATCGGGTGTAGATTTGCAAGTCCCAATCACTGGCTTGCATTTATCTCATGACTTGGTAGTACGAGTTGTGCATCTTCTGACTGACGAATCTCAAGCTCTCAATGTCACCCTAGAGGAAATTCATCAGGTTCAGGCTACACTTACTAGTCGTCACACAGTTGTGGACGCAGTGCTTAATGCTCTTAAAGCCAGGATCGCTGAATCTCAGGAGTCCTTGGATCCATAA

Coding sequence (CDS)

ATGGGTCCTGCTCCTCAGACTATCTCTCTCAACTATAAACTGTTCCAGGGCTCCCATGTGTCTAACCTTCCTACTACATTTCATCTTCCCCATTGGGGCTCTAGCTCATCGGGTGTAGATTTGCAAGTCCCAATCACTGGCTTGCATTTATCTCATGACTTGGTAGTACGAGTTGTGCATCTTCTGACTGACGAATCTCAAGCTCTCAATGTCACCCTAGAGGAAATTCATCAGGTTCAGGCTACACTTACTAGTCGTCACACAGTTGTGGACGCAGTGCTTAATGCTCTTAAAGCCAGGATCGCTGAATCTCAGGAGTCCTTGGATCCATAA

Protein sequence

MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVHLLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP
Homology
BLAST of MELO3C008522 vs. NCBI nr
Match: KAA0032352.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK31625.1 gag-proteinase polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 9.0e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1    MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 60
            MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH
Sbjct: 947  MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 1006

Query: 61   LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP 111
            LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP
Sbjct: 1007 LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP 1056

BLAST of MELO3C008522 vs. NCBI nr
Match: KAA0056448.1 (uncharacterized protein E6C27_scaffold186G002160 [Cucumis melo var. makuwa] >TYK29076.1 uncharacterized protein E5676_scaffold120G001980 [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-32
Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 0

Query: 1   MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 60
           +GPAPQ ISL+YKLFQGSHVS+LP TFH P  G SSSGVDLQVP+ GLHLSHDL +RVV 
Sbjct: 90  VGPAPQIISLSYKLFQGSHVSDLPATFHPPRRGFSSSGVDLQVPVVGLHLSHDLAIRVVQ 149

Query: 61  LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAES 105
           LL+DES+AL+V LEE+ +VQA+LT   TVVDAVLNA +ARIAES
Sbjct: 150 LLSDESRALSVILEEVQRVQASLTGCCTVVDAVLNAFRARIAES 193

BLAST of MELO3C008522 vs. NCBI nr
Match: KAA0036873.1 (uncharacterized protein E6C27_scaffold20G001850 [Cucumis melo var. makuwa] >TYJ95933.1 uncharacterized protein E5676_scaffold110G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-24
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 0

Query: 1   MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 60
           +GPAP+TI L+YKLFQGSHVSNL  TF  P WGS SS  +L +P  GLHL  +L VRV+ 
Sbjct: 52  VGPAPKTIFLSYKLFQGSHVSNLLATFRPPRWGSRSSRAELPIPAAGLHLPWELAVRVME 111

Query: 61  LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP 111
           LL++ESQALNV++E+I +V  TL  R   ++ VL  + AR+A SQ+S+DP
Sbjct: 112 LLSNESQALNVSIEKIQRVITTLAGRCMAMETVLATIHARLATSQDSVDP 161

BLAST of MELO3C008522 vs. NCBI nr
Match: KAA0058371.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23416.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 7.2e-18
Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 3   PAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVHLL 62
           P P+TI+L+YKLFQGSHVSNLPTTF  P   S SS     +P  GLHL  +L V +V LL
Sbjct: 236 PTPRTITLSYKLFQGSHVSNLPTTFRAPGPDSDSSRAKFTIPAIGLHLPRELAVHIVELL 295

Query: 63  TDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAES 105
           + ES+AL+V++ ++ +V ATLT +   VD++L  ++ R++ S
Sbjct: 296 SAESRALSVSIADVQRVFATLTGQRNTVDSILAVIRVRLSAS 337

BLAST of MELO3C008522 vs. NCBI nr
Match: TYJ98067.1 (hypothetical protein E5676_scaffold369G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 7.9e-17
Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 0

Query: 2   GPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVHL 61
           GP P T+SLNYK FQG+HVS+LPTTF  P     SS  +L +P  GLHLS DLV+R++ L
Sbjct: 6   GPTPHTVSLNYKTFQGAHVSDLPTTFCPPRRSVGSSRDELSIPDDGLHLSWDLVLRIMQL 65

Query: 62  LTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQES 108
           L++ES+AL +++ ++    + L  RH V+D++L+AL A +A  + S
Sbjct: 66  LSNESRALPMSVVDLQGAISALIGRHMVMDSLLHALCALLASFKTS 111

BLAST of MELO3C008522 vs. ExPASy TrEMBL
Match: A0A5A7SMT6 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold340G00140 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1    MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 60
            MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH
Sbjct: 947  MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 1006

Query: 61   LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP 111
            LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP
Sbjct: 1007 LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP 1056

BLAST of MELO3C008522 vs. ExPASy TrEMBL
Match: A0A5A7UMX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001980 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 0

Query: 1   MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 60
           +GPAPQ ISL+YKLFQGSHVS+LP TFH P  G SSSGVDLQVP+ GLHLSHDL +RVV 
Sbjct: 90  VGPAPQIISLSYKLFQGSHVSDLPATFHPPRRGFSSSGVDLQVPVVGLHLSHDLAIRVVQ 149

Query: 61  LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAES 105
           LL+DES+AL+V LEE+ +VQA+LT   TVVDAVLNA +ARIAES
Sbjct: 150 LLSDESRALSVILEEVQRVQASLTGCCTVVDAVLNAFRARIAES 193

BLAST of MELO3C008522 vs. ExPASy TrEMBL
Match: A0A5A7T1R6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002490 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 0

Query: 1   MGPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVH 60
           +GPAP+TI L+YKLFQGSHVSNL  TF  P WGS SS  +L +P  GLHL  +L VRV+ 
Sbjct: 52  VGPAPKTIFLSYKLFQGSHVSNLLATFRPPRWGSRSSRAELPIPAAGLHLPWELAVRVME 111

Query: 61  LLTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQESLDP 111
           LL++ESQALNV++E+I +V  TL  R   ++ VL  + AR+A SQ+S+DP
Sbjct: 112 LLSNESQALNVSIEKIQRVITTLAGRCMAMETVLATIHARLATSQDSVDP 161

BLAST of MELO3C008522 vs. ExPASy TrEMBL
Match: A0A5D3DIE7 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1359G00140 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.5e-18
Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 3   PAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVHLL 62
           P P+TI+L+YKLFQGSHVSNLPTTF  P   S SS     +P  GLHL  +L V +V LL
Sbjct: 236 PTPRTITLSYKLFQGSHVSNLPTTFRAPGPDSDSSRAKFTIPAIGLHLPRELAVHIVELL 295

Query: 63  TDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAES 105
           + ES+AL+V++ ++ +V ATLT +   VD++L  ++ R++ S
Sbjct: 296 SAESRALSVSIADVQRVFATLTGQRNTVDSILAVIRVRLSAS 337

BLAST of MELO3C008522 vs. ExPASy TrEMBL
Match: A0A5D3BG21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00200 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-17
Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 0

Query: 2   GPAPQTISLNYKLFQGSHVSNLPTTFHLPHWGSSSSGVDLQVPITGLHLSHDLVVRVVHL 61
           GP P T+SLNYK FQG+HVS+LPTTF  P     SS  +L +P  GLHLS DLV+R++ L
Sbjct: 6   GPTPHTVSLNYKTFQGAHVSDLPTTFCPPRRSVGSSRDELSIPDDGLHLSWDLVLRIMQL 65

Query: 62  LTDESQALNVTLEEIHQVQATLTSRHTVVDAVLNALKARIAESQES 108
           L++ES+AL +++ ++    + L  RH V+D++L+AL A +A  + S
Sbjct: 66  LSNESRALPMSVVDLQGAISALIGRHMVMDSLLHALCALLASFKTS 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0032352.19.0e-53100.00gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK31625.1 gag-proteinase... [more]
KAA0056448.12.3e-3274.04uncharacterized protein E6C27_scaffold186G002160 [Cucumis melo var. makuwa] >TYK... [more]
KAA0036873.13.9e-2456.36uncharacterized protein E6C27_scaffold20G001850 [Cucumis melo var. makuwa] >TYJ9... [more]
KAA0058371.17.2e-1849.02flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23416.1 flocculat... [more]
TYJ98067.17.9e-1748.11hypothetical protein E5676_scaffold369G00200 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SMT64.4e-53100.00Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A5A7UMX61.1e-3274.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T1R61.9e-2456.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DIE73.5e-1849.02Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BG213.8e-1748.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008522.1MELO3C008522.1mRNA